RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 GOLT1BQ9Y3E0 138 aa10.68□□□□□ -0.7
HDAC4-204ENST00000446876 TIMM9Q9Y5J7 89 aa10.68□□□□□ -0.7
HDAC4-204ENST00000446876 ALMS1Q8TCU4 4167 aa10.68□□□□□ -0.7
HDAC4-204ENST00000446876 LCE6AA0A183 80 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 RNF222A6NCQ9 220 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 NUPR2A6NF83 97 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 SMLR1H3BR10 107 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 OR7C2O60412 319 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 ZNF253O75346 499 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 INSP01308 110 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 PRM2P04554 102 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 EMP1P54849 157 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 RAB2AP61019 212 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 ZNF767PQ75MW2 155 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 HSD17B11Q8NBQ5 300 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 FXYD5Q96DB9 178 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 ZNF503Q96F45 646 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 NEU1Q99519 415 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 PAXXQ9BUH6 204 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 OR51M1Q9H341 326 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 PPP1R14DQ9NXH3 145 aa10.67□□□□□ -0.7
HDAC4-204ENST00000446876 KIR3DS1Q14943 382 aa10.66□□□□□ -0.7
HDAC4-204ENST00000446876 OR10J6PQ8NGY7 276 aa10.66□□□□□ -0.7
HDAC4-204ENST00000446876 PHYHIPLQ96FC7 376 aa10.66□□□□□ -0.7
HDAC4-204ENST00000446876 TMEM208Q9BTX3 173 aa10.66□□□□□ -0.7
HDAC4-204ENST00000446876 TNFSF18Q9UNG2 199 aa10.66□□□□□ -0.7
HDAC4-204ENST00000446876 AMBPP02760 352 aa10.65□□□□□ -0.7
HDAC4-204ENST00000446876 NBEAP1P0C6P0 100 aa10.65□□□□□ -0.7
HDAC4-204ENST00000446876 PDE6HQ13956 83 aa10.65□□□□□ -0.7
HDAC4-204ENST00000446876 ZNF266Q14584 549 aa10.65□□□□□ -0.7
HDAC4-204ENST00000446876 ICAM4Q14773 271 aa10.65□□□□□ -0.7
HDAC4-204ENST00000446876 FAM122CQ6P4D5 195 aa10.65□□□□□ -0.7
HDAC4-204ENST00000446876 INO80EQ8NBZ0 244 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-204ENST00000446876 RNF141Q8WVD5 230 aa10.65□□□□□ -0.7
HDAC4-204ENST00000446876 HYDINQ4G0P3 5121 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 LOC102723971A0A1B0GUV8 181 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 SMIM9A6NGZ8 99 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 ZNF705GA8MUZ8 300 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-204ENST00000446876 J3KRW8 73 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 HMGB3O15347 200 aaKnown RBP10.64□□□□□ -0.71
HDAC4-204ENST00000446876 HBE1P02100 147 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 CT45A10P0DMU9 189 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 ATP6V0CP27449 155 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 UBE2L3P68036 154 aaKnown RBP10.64□□□□□ -0.71
HDAC4-204ENST00000446876 ERCC8Q13216 396 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 ACOT6Q3I5F7 207 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-204ENST00000446876 Q6ZTC4 211 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 RPP25LQ8N5L8 163 aaKnown RBP10.64□□□□□ -0.71
HDAC4-204ENST00000446876 SH3BGRL3Q9H299 93 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 DNAH1Q9P2D7 4330 aa10.64□□□□□ -0.71
HDAC4-204ENST00000446876 IGKV2-40A0A087WW87 121 aaPredicted RBP10.63□□□□□ -0.71
HDAC4-204ENST00000446876 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
HDAC4-204ENST00000446876 IGKV2D-40P01614 121 aaPredicted RBP10.63□□□□□ -0.71
HDAC4-204ENST00000446876 M6PRP20645 277 aa10.63□□□□□ -0.71
HDAC4-204ENST00000446876 CDKN1BP46527 198 aa10.63□□□□□ -0.71
HDAC4-204ENST00000446876 RRN3P1Q2M238 152 aa10.63□□□□□ -0.71
HDAC4-204ENST00000446876 C12orf74Q32Q52 190 aa10.63□□□□□ -0.71
HDAC4-204ENST00000446876 KHDC3LQ587J8 217 aa10.63□□□□□ -0.71
HDAC4-204ENST00000446876 RPL7L1Q6DKI1 246 aaKnown RBP10.63□□□□□ -0.71
HDAC4-204ENST00000446876 MRPL53Q96EL3 112 aaKnown RBP10.63□□□□□ -0.71
HDAC4-204ENST00000446876 AAMDCQ9H7C9 122 aa10.63□□□□□ -0.71
HDAC4-204ENST00000446876 ARPC5O15511 151 aa10.62□□□□□ -0.71
HDAC4-204ENST00000446876 JTBO76095 146 aa10.62□□□□□ -0.71
HDAC4-204ENST00000446876 OR10G4Q8NGN3 311 aa10.62□□□□□ -0.71
HDAC4-204ENST00000446876 OR10G9Q8NGN4 311 aa10.62□□□□□ -0.71
HDAC4-204ENST00000446876 OR10G7Q8NGN6 311 aa10.62□□□□□ -0.71
HDAC4-204ENST00000446876 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
HDAC4-204ENST00000446876 PRELID1Q9Y255 219 aa10.62□□□□□ -0.71
HDAC4-204ENST00000446876 KLK5Q9Y337 293 aaPredicted RBP10.62□□□□□ -0.71
HDAC4-204ENST00000446876 YTHDF2Q9Y5A9 579 aaKnown RBP10.62□□□□□ -0.71
HDAC4-204ENST00000446876 A0A1W2PPV4 95 aa10.61□□□□□ -0.71
HDAC4-204ENST00000446876 AZU1P20160 251 aa10.61□□□□□ -0.71
HDAC4-204ENST00000446876 TAS2R45P59539 299 aa10.61□□□□□ -0.71
HDAC4-204ENST00000446876 RANP62826 216 aaKnown RBP10.61□□□□□ -0.71
HDAC4-204ENST00000446876 FAM222AQ5U5X8 452 aa10.61□□□□□ -0.71
HDAC4-204ENST00000446876 GFI1BQ5VTD9 330 aa10.61□□□□□ -0.71
HDAC4-204ENST00000446876 OR2G3Q8NGZ4 309 aa10.61□□□□□ -0.71
HDAC4-204ENST00000446876 LINC01587Q99440 93 aa10.61□□□□□ -0.71
HDAC4-204ENST00000446876 PSMG3Q9BT73 122 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-204ENST00000446876 Q9H3A6 140 aa10.61□□□□□ -0.71
HDAC4-204ENST00000446876 TMEM189A5PLL7 270 aa10.6□□□□□ -0.71
HDAC4-204ENST00000446876 HTN1P15515 57 aa10.6□□□□□ -0.71
HDAC4-204ENST00000446876 CDC34P49427 236 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-204ENST00000446876 VGLL1Q99990 258 aa10.6□□□□□ -0.71
HDAC4-204ENST00000446876 AGPAT4-IT1Q9H0P7 198 aa10.6□□□□□ -0.71
HDAC4-204ENST00000446876 DKK2Q9UBU2 259 aa10.6□□□□□ -0.71
HDAC4-204ENST00000446876 BORCS7-ASMTA0A0B4J1R7 106 aa10.59□□□□□ -0.71
HDAC4-204ENST00000446876 SPART-AS1P0CW21 52 aa10.59□□□□□ -0.71
HDAC4-204ENST00000446876 TSPOP30536 169 aa10.59□□□□□ -0.71
HDAC4-204ENST00000446876 LEPP41159 167 aa10.59□□□□□ -0.71
HDAC4-204ENST00000446876 C2CD4CQ8TF44 421 aa10.59□□□□□ -0.71
HDAC4-204ENST00000446876 LINC00476Q8WZB0 136 aa10.59□□□□□ -0.71
HDAC4-204ENST00000446876 ODF3Q96PU9 254 aa10.59□□□□□ -0.71
HDAC4-204ENST00000446876 TRAV10A0A0B4J240 114 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 TRAV12-3A0A0B4J271 114 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 IGLL5B9A064 214 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 C11orf94C9JXX5 98 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 ARL14EPLP0DKL9 152 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 PQLC2Q6ZP29 291 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 SSX7Q7RTT5 188 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 967.6 ms