RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 HAGHQ16775 308 aa5.66□□□□□ -1.5
SF3A3P1-201ENST00000446317 KHDC3LQ587J8 217 aa5.66□□□□□ -1.5
SF3A3P1-201ENST00000446317 PSMG4Q5JS54 123 aa5.66□□□□□ -1.5
SF3A3P1-201ENST00000446317 FAM90A2PQ658T7 463 aa5.66□□□□□ -1.5
SF3A3P1-201ENST00000446317 LINC00528Q8N1L1 170 aa5.66□□□□□ -1.5
SF3A3P1-201ENST00000446317 SGK494Q96LW2 274 aa5.66□□□□□ -1.5
SF3A3P1-201ENST00000446317 TMEM231Q9H6L2 316 aa5.66□□□□□ -1.5
SF3A3P1-201ENST00000446317 GNG13Q9P2W3 67 aa5.66□□□□□ -1.5
SF3A3P1-201ENST00000446317 YTHDF2Q9Y5A9 579 aaKnown RBP5.66□□□□□ -1.5
SF3A3P1-201ENST00000446317 PRAC2D3DTV9 90 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 J3KRW8 73 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 M0R3E3 92 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 STAG3L2P0CL84 134 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 STAG3L3P0CL85 134 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 IGLC2P0DOY2 106 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 ATP5G3P48201 142 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 FXYD7P58549 80 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 DEFB131AP59861 70 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 ICAM4Q14773 271 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 CST9LP1Q5W188 147 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 BPIFA4PQ86YQ2 179 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 DEFB125Q8N687 156 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 WFDC9Q8NEX5 89 aa5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 MRPL32Q9BYC8 188 aaKnown RBP5.65□□□□□ -1.5
SF3A3P1-201ENST00000446317 IGKV2-40A0A087WW87 121 aaPredicted RBP5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 A0A1B0GV90 55 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 HELTA6NFD8 242 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 PAGE4O60829 102 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 NDUFB4O95168 129 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 CXorf1O96002 111 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 IGKV2D-40P01614 121 aaPredicted RBP5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 NBEAP1P0C6P0 100 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 RPL35AP18077 110 aaKnown RBP5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 RPL7P18124 248 aaKnown RBP5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 CEBPGP53567 150 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 TAS2R45P59539 299 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 ERCC8Q13216 396 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 GDF5OSQ5U4N7 250 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 EIF5AL1Q6IS14 154 aaKnown RBP5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 ZNF738Q8NE65 137 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 RARRES2Q99969 163 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 NRN1Q9NPD7 142 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 TRBV19A0A075B6N1 114 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 PGPA6NDG6 321 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 UMAD1C9J7I0 102 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 K7EQG2 157 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 HIST1H1EP10412 219 aaKnown RBP5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 RAB5BP61020 215 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 KRTAP21-3Q3LHN1 58 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 ACTL10Q5JWF8 245 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 LCN12Q6JVE5 192 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 SMIM15Q7Z3B0 74 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 DCANP1Q8TF63 244 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 MCRIP2Q9BUT9 160 aaKnown RBP5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 Q9H3A6 140 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 MAP6D1Q9H9H5 199 aa5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 ZNF256Q9Y2P7 627 aaPredicted RBP5.64□□□□□ -1.51
SF3A3P1-201ENST00000446317 TRAV34A0A0B4J273 112 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 OR4C46A6NHA9 309 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 GGTLC3B5MD39 225 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 SOCS3O14543 225 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 SLC25A5P05141 298 aaKnown RBP5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 NMBP08949 121 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 NUTF2P61970 127 aaKnown RBP5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 PAFAH1B2P68402 229 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 SRSF3P84103 164 aaKnown RBP5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 ODF3L2Q3SX64 289 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 C1orf194Q5T5A4 169 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 MRPL52Q86TS9 123 aaKnown RBP5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 RXFP4Q8TDU9 374 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 MBD3L1Q8WWY6 194 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 SAT2Q96F10 170 aaPredicted RBP5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 C14orf144Q96I85 54 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 LINC00479Q96M42 142 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 TMEM14CQ9P0S9 112 aa5.63□□□□□ -1.51
SF3A3P1-201ENST00000446317 TRAV8-1A0A0A6YYK1 113 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 A0A1W2PPQ1 181 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 C5orf52A6NGY3 159 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 OR11H12B2RN74 326 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 LCE2BO14633 110 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 SUMO1P63165 101 aaKnown RBP5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 HIST1H1AQ02539 215 aaPredicted RBP5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 WDR73Q6P4I2 378 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 PQLC2Q6ZP29 291 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 S100A7AQ86SG5 101 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 OR4B1Q8NGF8 309 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 Q8TAT8 98 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 RPUSD4Q96CM3 377 aaKnown RBP5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 NKX6-2Q9C056 277 aaPredicted RBP5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 ZNF331Q9NQX6 463 aaPredicted RBP5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 AURKAIP1Q9NWT8 199 aaPredicted RBP5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 SIGLEC8Q9NYZ4 499 aa5.62□□□□□ -1.51
SF3A3P1-201ENST00000446317 A0A087X0K7 114 aa5.61□□□□□ -1.51
SF3A3P1-201ENST00000446317 SCO2A0A1W2PP80 73 aa5.61□□□□□ -1.51
SF3A3P1-201ENST00000446317 FAM74A7A6NL05 159 aa5.61□□□□□ -1.51
SF3A3P1-201ENST00000446317 TSTD3H0UI37 97 aa5.61□□□□□ -1.51
SF3A3P1-201ENST00000446317 S100A7P31151 101 aa5.61□□□□□ -1.51
SF3A3P1-201ENST00000446317 RAB5CP51148 216 aa5.61□□□□□ -1.51
SF3A3P1-201ENST00000446317 PKIAP61925 76 aa5.61□□□□□ -1.51
SF3A3P1-201ENST00000446317 BLOC1S1P78537 153 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms