RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 U3KQK5 164 aa11□□□□□ -0.65
VPS52-212ENST00000445902 TNRC18O15417 2968 aaPredicted RBP11□□□□□ -0.65
VPS52-212ENST00000445902 SCGB1A1P11684 91 aa10.99□□□□□ -0.65
VPS52-212ENST00000445902 ODF1Q14990 250 aa10.99□□□□□ -0.65
VPS52-212ENST00000445902 ZC2HC1BQ5TFG8 222 aa10.99□□□□□ -0.65
VPS52-212ENST00000445902 IGLL5B9A064 214 aa10.99□□□□□ -0.65
VPS52-212ENST00000445902 CCL11P51671 97 aa10.99□□□□□ -0.65
VPS52-212ENST00000445902 CEND1Q8N111 149 aa10.99□□□□□ -0.65
VPS52-212ENST00000445902 ADGRG4Q8IZF6 3080 aa10.99□□□□□ -0.65
VPS52-212ENST00000445902 TRAV26-1A0A087WT03 109 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 PRR33A8MZF0 331 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 GATA1P15976 413 aaPredicted RBP10.98□□□□□ -0.65
VPS52-212ENST00000445902 Q6AWC8 147 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 SVIPQ8NHG7 77 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 Q8TAT8 98 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 TMEM160Q9NX00 188 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 IGKV2-40A0A087WW87 121 aaPredicted RBP10.98□□□□□ -0.65
VPS52-212ENST00000445902 IGKV2D-40P01614 121 aaPredicted RBP10.98□□□□□ -0.65
VPS52-212ENST00000445902 GATA4P43694 442 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 FOXI2Q6ZQN5 318 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 TMEM14CQ9P0S9 112 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 J3QR89 54 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 C22orf34Q6ZV56 151 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 SCNM1Q9BWG6 230 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 DKK4Q9UBT3 224 aa10.98□□□□□ -0.65
VPS52-212ENST00000445902 NDUFS8O00217 210 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 IGKV1-17P01599 117 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 IGKCP01834 107 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 SRSF6Q13247 344 aaKnown RBP10.97□□□□□ -0.65
VPS52-212ENST00000445902 LYPD2Q6UXB3 125 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 IGLV3-9A0A075B6K5 115 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 NPIPB5A8MRT5 1133 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 E9PLD3 99 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 PRRG2O14669 202 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 EGR2P11161 476 aaPredicted RBP10.97□□□□□ -0.65
VPS52-212ENST00000445902 IGFL4Q6B9Z1 124 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 WNK2Q9Y3S1 2297 aa10.97□□□□□ -0.65
VPS52-212ENST00000445902 TRAV40A0A0B4J280 105 aa10.96□□□□□ -0.65
VPS52-212ENST00000445902 TMEM8BA6NDV4 472 aa10.96□□□□□ -0.65
VPS52-212ENST00000445902 F8W1H4 67 aa10.96□□□□□ -0.65
VPS52-212ENST00000445902 IL4P05112 153 aa10.96□□□□□ -0.65
VPS52-212ENST00000445902 IGHG3P01860 377 aa10.96□□□□□ -0.66
VPS52-212ENST00000445902 FAM169BQ8N8A8 192 aa10.96□□□□□ -0.66
VPS52-212ENST00000445902 SPATA25Q9BR10 227 aa10.96□□□□□ -0.66
VPS52-212ENST00000445902 C20orf78Q9BR46 151 aa10.96□□□□□ -0.66
VPS52-212ENST00000445902 FBXL15Q9H469 300 aa10.96□□□□□ -0.66
VPS52-212ENST00000445902 HIGD1BQ9P298 99 aa10.96□□□□□ -0.66
VPS52-212ENST00000445902 SCGB2A2Q13296 93 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 TMEM30BQ3MIR4 351 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 ZNF474Q6S9Z5 364 aaPredicted RBP10.95□□□□□ -0.66
VPS52-212ENST00000445902 SFTA2Q6UW10 78 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 TDHQ8IZJ6 230 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 SHANK2-AS3Q9BTD1 123 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 MAP1LC3AQ9H492 121 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 DMXL1Q9Y485 3027 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 C12orf74Q32Q52 190 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 TMEM158Q8WZ71 300 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 ZNF80P51504 273 aaPredicted RBP10.95□□□□□ -0.66
VPS52-212ENST00000445902 CRYBA4P53673 196 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 GAGE13Q4V321 117 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 FDCSPQ8NFU4 85 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 CCL17Q92583 94 aa10.95□□□□□ -0.66
VPS52-212ENST00000445902 TRBV6-1A0A0K0K1D8 114 aa10.94□□□□□ -0.66
VPS52-212ENST00000445902 A0A1B0GWB2 263 aa10.94□□□□□ -0.66
VPS52-212ENST00000445902 LAMTOR5O43504 91 aa10.94□□□□□ -0.66
VPS52-212ENST00000445902 SEM1Q6ZVN7 128 aa10.94□□□□□ -0.66
VPS52-212ENST00000445902 HIST1H4GQ99525 98 aa10.94□□□□□ -0.66
VPS52-212ENST00000445902 SIGLEC9Q9Y336 463 aa10.94□□□□□ -0.66
VPS52-212ENST00000445902 CNOT1A5YKK6 2376 aaKnown RBP10.94□□□□□ -0.66
VPS52-212ENST00000445902 TEX22C9J3V5 150 aa10.94□□□□□ -0.66
VPS52-212ENST00000445902 KLF17Q5JT82 389 aaPredicted RBP10.94□□□□□ -0.66
VPS52-212ENST00000445902 TM2D2Q9BX73 214 aa10.94□□□□□ -0.66
VPS52-212ENST00000445902 MRPL35Q9NZE8 188 aaKnown RBP10.94□□□□□ -0.66
VPS52-212ENST00000445902 H3BRN7 92 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 I3L2K1 104 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 PLGLAQ15195 96 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 TEX36Q5VZQ5 186 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 IGFBPL1Q8WX77 278 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 DPM2O94777 84 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 ORM1P02763 201 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 MC5RP33032 325 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 RNF125Q96EQ8 232 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 RNF185Q96GF1 192 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 AAMDCQ9H7C9 122 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 ZMAT4Q9H898 229 aa10.93□□□□□ -0.66
VPS52-212ENST00000445902 TNFRSF6BO95407 300 aa10.92□□□□□ -0.66
VPS52-212ENST00000445902 PPP1R27Q86WC6 154 aa10.92□□□□□ -0.66
VPS52-212ENST00000445902 MGAQ8IWI9 3026 aa10.92□□□□□ -0.66
VPS52-212ENST00000445902 NDUFA3O95167 84 aa10.92□□□□□ -0.66
VPS52-212ENST00000445902 HLA-DMBP28068 263 aa10.92□□□□□ -0.66
VPS52-212ENST00000445902 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
VPS52-212ENST00000445902 ZNF491Q8N8L2 437 aa10.92□□□□□ -0.66
VPS52-212ENST00000445902 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
VPS52-212ENST00000445902 GEMIN7Q9H840 131 aaKnown RBP10.92□□□□□ -0.66
VPS52-212ENST00000445902 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
VPS52-212ENST00000445902 NDUFB3O43676 98 aa10.91□□□□□ -0.66
VPS52-212ENST00000445902 CNIH1O95406 144 aa10.91□□□□□ -0.66
VPS52-212ENST00000445902 APOMO95445 188 aa10.91□□□□□ -0.66
VPS52-212ENST00000445902 FAM27E3Q08E93 113 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms