RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 NPIPB5A8MRT5 1133 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 PPIFP30405 207 aaKnown RBP11.19□□□□□ -0.62
ERCC3-203ENST00000445889 PSG3Q16557 428 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 LINC01560Q8TB33 94 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 RNF125Q96EQ8 232 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 SCNM1Q9BWG6 230 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 MSRB1Q9NZV6 116 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 ATRXP46100 2492 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 SHISA9B4DS77 424 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 H3BUT2 72 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 FAM71F2Q6NXP2 309 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 TTTY13Q9BZ97 58 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 NMUP48645 174 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 IGFL3Q6UXB1 125 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 GFRALQ6UXV0 394 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 PRELID3AQ96N28 172 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 AP1S3Q96PC3 154 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 SHANK2-AS3Q9BTD1 123 aa11.18□□□□□ -0.62
ERCC3-203ENST00000445889 K7EQM0 130 aa11.17□□□□□ -0.62
ERCC3-203ENST00000445889 CT45A10P0DMU9 189 aa11.17□□□□□ -0.62
ERCC3-203ENST00000445889 RIPPLY3P57055 190 aa11.17□□□□□ -0.62
ERCC3-203ENST00000445889 RBPJQ06330 500 aa11.17□□□□□ -0.62
ERCC3-203ENST00000445889 ZNF414Q96IQ9 312 aa11.17□□□□□ -0.62
ERCC3-203ENST00000445889 PCP2Q8IVA1 136 aa11.17□□□□□ -0.62
ERCC3-203ENST00000445889 TMEM14CQ9P0S9 112 aa11.17□□□□□ -0.62
ERCC3-203ENST00000445889 K7EMI3 77 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 GNG7O60262 68 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 C16orf54Q6UWD8 224 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 ASCL5Q7RTU5 278 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 MEGF9Q9H1U4 602 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 IGHV3OR16-13A0A075B7E8 117 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 IGHV3-74A0A0B4J1X5 117 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 PPBPP02775 128 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 GRNP28799 593 aaKnown RBP11.16□□□□□ -0.62
ERCC3-203ENST00000445889 TWIST1Q15672 202 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 JMJD8Q96S16 334 aa11.16□□□□□ -0.62
ERCC3-203ENST00000445889 TMEM189A5PLL7 270 aa11.15□□□□□ -0.62
ERCC3-203ENST00000445889 SH2D1AO60880 128 aa11.15□□□□□ -0.62
ERCC3-203ENST00000445889 FGF6P10767 208 aa11.15□□□□□ -0.62
ERCC3-203ENST00000445889 HOXB4P17483 251 aaPredicted RBP11.15□□□□□ -0.62
ERCC3-203ENST00000445889 ZNF80P51504 273 aaPredicted RBP11.15□□□□□ -0.62
ERCC3-203ENST00000445889 ARL6IP6Q8N6S5 226 aa11.15□□□□□ -0.62
ERCC3-203ENST00000445889 DKK2Q9UBU2 259 aa11.15□□□□□ -0.62
ERCC3-203ENST00000445889 H3BRN7 92 aa11.15□□□□□ -0.62
ERCC3-203ENST00000445889 IGHV3-66A0A0C4DH42 116 aa11.15□□□□□ -0.63
ERCC3-203ENST00000445889 NPYP01303 97 aa11.15□□□□□ -0.63
ERCC3-203ENST00000445889 EGR2P11161 476 aaPredicted RBP11.15□□□□□ -0.63
ERCC3-203ENST00000445889 MRPL51Q4U2R6 128 aaKnown RBP11.15□□□□□ -0.63
ERCC3-203ENST00000445889 C8orf31Q8N9H6 132 aa11.15□□□□□ -0.63
ERCC3-203ENST00000445889 VGLL1Q99990 258 aa11.15□□□□□ -0.63
ERCC3-203ENST00000445889 SPTAN1Q13813 2472 aaKnown RBP11.14□□□□□ -0.63
ERCC3-203ENST00000445889 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.14□□□□□ -0.63
ERCC3-203ENST00000445889 NCBP2LA6PVI3 153 aaKnown RBP11.14□□□□□ -0.63
ERCC3-203ENST00000445889 EVI2AP22794 236 aa11.14□□□□□ -0.63
ERCC3-203ENST00000445889 KAAG1Q9UBP8 84 aa11.14□□□□□ -0.63
ERCC3-203ENST00000445889 COL6A6A6NMZ7 2263 aa11.14□□□□□ -0.63
ERCC3-203ENST00000445889 K7ERU9 68 aa11.14□□□□□ -0.63
ERCC3-203ENST00000445889 GATA1P15976 413 aaPredicted RBP11.14□□□□□ -0.63
ERCC3-203ENST00000445889 CKS2P33552 79 aa11.14□□□□□ -0.63
ERCC3-203ENST00000445889 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
ERCC3-203ENST00000445889 ORMDL3Q8N138 153 aa11.14□□□□□ -0.63
ERCC3-203ENST00000445889 VSTM5A8MXK1 200 aa11.13□□□□□ -0.63
ERCC3-203ENST00000445889 FAM104BQ5XKR9 115 aa11.13□□□□□ -0.63
ERCC3-203ENST00000445889 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
ERCC3-203ENST00000445889 APOBEC3AP31941 199 aaPredicted RBP11.13□□□□□ -0.63
ERCC3-203ENST00000445889 SMIM15Q7Z3B0 74 aa11.13□□□□□ -0.63
ERCC3-203ENST00000445889 AAMDCQ9H7C9 122 aa11.13□□□□□ -0.63
ERCC3-203ENST00000445889 SEC11AP67812 179 aa11.12□□□□□ -0.63
ERCC3-203ENST00000445889 ERCC8Q13216 396 aa11.12□□□□□ -0.63
ERCC3-203ENST00000445889 A1L4Q6 167 aa11.12□□□□□ -0.63
ERCC3-203ENST00000445889 ORM1P02763 201 aa11.12□□□□□ -0.63
ERCC3-203ENST00000445889 TMEM11P17152 192 aa11.12□□□□□ -0.63
ERCC3-203ENST00000445889 NDPQ00604 133 aa11.12□□□□□ -0.63
ERCC3-203ENST00000445889 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
ERCC3-203ENST00000445889 IFI27L1Q96BM0 104 aa11.12□□□□□ -0.63
ERCC3-203ENST00000445889 VPS13CQ709C8 3753 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 HRNRQ86YZ3 2850 aaPredicted RBP11.11□□□□□ -0.63
ERCC3-203ENST00000445889 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 Q8NA96 180 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 A6NDN8 102 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 C9orf118A6NHY6 69 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 SMAD7O15105 426 aaKnown RBP11.11□□□□□ -0.63
ERCC3-203ENST00000445889 HBDP02042 147 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 FANCD2OSQ96PS1 177 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 CSTL1Q9H114 145 aa11.11□□□□□ -0.63
ERCC3-203ENST00000445889 FAM90A27PA6NNH2 459 aa11.1□□□□□ -0.63
ERCC3-203ENST00000445889 NBR2O15453 112 aa11.1□□□□□ -0.63
ERCC3-203ENST00000445889 RNF182Q8N6D2 247 aa11.1□□□□□ -0.63
ERCC3-203ENST00000445889 RPS20P60866 119 aaKnown RBP11.1□□□□□ -0.63
ERCC3-203ENST00000445889 ZNF493Q6ZR52 646 aa11.1□□□□□ -0.63
ERCC3-203ENST00000445889 GTF2H5Q6ZYL4 71 aa11.1□□□□□ -0.63
ERCC3-203ENST00000445889 A0A1B0GW15 77 aa11.09□□□□□ -0.63
ERCC3-203ENST00000445889 NDUFS7O75251 213 aa11.09□□□□□ -0.63
ERCC3-203ENST00000445889 LGALS9BQ3B8N2 356 aa11.09□□□□□ -0.63
ERCC3-203ENST00000445889 LGALS9CQ6DKI2 356 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms