RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 LOC102723971A0A1B0GUV8 181 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 RBFOX3A6NFN3 312 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 ZNF705FA8MVS1 300 aaPredicted RBP11.24□□□□□ -0.61
CCNE1-203ENST00000444983 CD7P09564 240 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 TAGLN2P37802 199 aaKnown RBP11.24□□□□□ -0.61
CCNE1-203ENST00000444983 ATP5G3P48201 142 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 HAGHQ16775 308 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 MED9Q9NWA0 146 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 IFNA1P01562 189 aa11.23□□□□□ -0.61
CCNE1-203ENST00000444983 CD81P60033 236 aa11.23□□□□□ -0.61
CCNE1-203ENST00000444983 MEF2BQ02080 365 aaPredicted RBP11.23□□□□□ -0.61
CCNE1-203ENST00000444983 PSMG4Q5JS54 123 aa11.23□□□□□ -0.61
CCNE1-203ENST00000444983 ZNF506Q5JVG8 444 aa11.23□□□□□ -0.61
CCNE1-203ENST00000444983 KPRPQ5T749 579 aaPredicted RBP11.23□□□□□ -0.61
CCNE1-203ENST00000444983 CST9LP1Q5W188 147 aa11.23□□□□□ -0.61
CCNE1-203ENST00000444983 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
CCNE1-203ENST00000444983 VAX2Q9UIW0 290 aa11.23□□□□□ -0.61
CCNE1-203ENST00000444983 C11orf94C9JXX5 98 aa11.22□□□□□ -0.61
CCNE1-203ENST00000444983 PRAC2D3DTV9 90 aa11.22□□□□□ -0.61
CCNE1-203ENST00000444983 CMC4P56277 68 aaPredicted RBP11.22□□□□□ -0.61
CCNE1-203ENST00000444983 Q8N1Y9 231 aa11.22□□□□□ -0.61
CCNE1-203ENST00000444983 RXFP4Q8TDU9 374 aa11.22□□□□□ -0.61
CCNE1-203ENST00000444983 LINC00052Q96N35 136 aa11.22□□□□□ -0.61
CCNE1-203ENST00000444983 DIRC3C9JPN6 131 aa11.21□□□□□ -0.61
CCNE1-203ENST00000444983 NDUFS6O75380 124 aaKnown RBP11.21□□□□□ -0.61
CCNE1-203ENST00000444983 DEFB131AP59861 70 aa11.21□□□□□ -0.61
CCNE1-203ENST00000444983 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.61
CCNE1-203ENST00000444983 TCEAL7Q9BRU2 100 aa11.21□□□□□ -0.61
CCNE1-203ENST00000444983 EPDR1Q9UM22 224 aa11.21□□□□□ -0.61
CCNE1-203ENST00000444983 LINC00862A6NCI5 91 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 TCRAP04437 139 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 DEFB1P60022 68 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 SRSF3P84103 164 aaKnown RBP11.2□□□□□ -0.62
CCNE1-203ENST00000444983 SMUG1Q53HV7 270 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 TOR2AQ5JU69 321 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 ZMAT5Q9UDW3 170 aaKnown RBP11.2□□□□□ -0.62
CCNE1-203ENST00000444983 OR11H12B2RN74 326 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 F6UB75 175 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 SLC25A5P05141 298 aaKnown RBP11.2□□□□□ -0.62
CCNE1-203ENST00000444983 GNG5P63218 68 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 ZNF124Q15973 351 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 GDF5OSQ5U4N7 250 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 CMTM2Q8TAZ6 248 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 HIST1H2BAQ96A08 127 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 SAV1Q9H4B6 383 aaPredicted RBP11.2□□□□□ -0.62
CCNE1-203ENST00000444983 SMDT1Q9H4I9 107 aa11.2□□□□□ -0.62
CCNE1-203ENST00000444983 DNAH3Q8TD57 4116 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 AGRNO00468 2067 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 A0A0J9YX75 114 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 RAB19A4D1S5 217 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 RBAKDNA6NC62 111 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 PRB4P10163 310 aaPredicted RBP11.19□□□□□ -0.62
CCNE1-203ENST00000444983 FOXI2Q6ZQN5 318 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 GTSCR1Q86UQ5 136 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 APRG1Q8IVJ8 170 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 SLC7A5P1Q8MH63 180 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 ZNF738Q8NE65 137 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 C11orf52Q96A22 123 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 CITED4Q96RK1 184 aa11.19□□□□□ -0.62
CCNE1-203ENST00000444983 EIF5A2Q9GZV4 153 aaKnown RBP11.19□□□□□ -0.62
CCNE1-203ENST00000444983 C9JQL5 133 aa11.18□□□□□ -0.62
CCNE1-203ENST00000444983 PDE6DO43924 150 aa11.18□□□□□ -0.62
CCNE1-203ENST00000444983 IGLV2-11P01706 119 aa11.18□□□□□ -0.62
CCNE1-203ENST00000444983 CSN1S1P47710 185 aa11.18□□□□□ -0.62
CCNE1-203ENST00000444983 OR8A1Q8NGG7 326 aa11.18□□□□□ -0.62
CCNE1-203ENST00000444983 C2CD4CQ8TF44 421 aa11.18□□□□□ -0.62
CCNE1-203ENST00000444983 PRR25Q96S07 402 aa11.18□□□□□ -0.62
CCNE1-203ENST00000444983 ATG101Q9BSB4 218 aa11.18□□□□□ -0.62
CCNE1-203ENST00000444983 WFDC10AQ9H1F0 79 aa11.18□□□□□ -0.62
CCNE1-203ENST00000444983 A8MTW9 85 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 PEX7O00628 323 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 C9orf47Q6ZRZ4 202 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 EIF4E3Q8N5X7 224 aaKnown RBP11.17□□□□□ -0.62
CCNE1-203ENST00000444983 KLF12Q9Y4X4 402 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 IGKV2-40A0A087WW87 121 aaPredicted RBP11.17□□□□□ -0.62
CCNE1-203ENST00000444983 SERTM2A0A1B0GWG4 89 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 SCO2A0A1W2PP80 73 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 NPIPB6E9PJ23 425 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 TMEM250H0YL14 139 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 H3BMM0 161 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 IGKV2D-40P01614 121 aaPredicted RBP11.17□□□□□ -0.62
CCNE1-203ENST00000444983 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
CCNE1-203ENST00000444983 HLA-DRB4P13762 266 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 CYB561D1Q8N8Q1 229 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 LINC00479Q96M42 142 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 VGLL1Q99990 258 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 HLA-DRB4X5D2U9 266 aa11.17□□□□□ -0.62
CCNE1-203ENST00000444983 KNCNA6PVL3 124 aa11.16□□□□□ -0.62
CCNE1-203ENST00000444983 F6UZH7 168 aa11.16□□□□□ -0.62
CCNE1-203ENST00000444983 ZNF705DP0CH99 300 aaPredicted RBP11.16□□□□□ -0.62
CCNE1-203ENST00000444983 ZNF705BP0CI00 300 aaPredicted RBP11.16□□□□□ -0.62
CCNE1-203ENST00000444983 PEA15Q15121 130 aa11.16□□□□□ -0.62
CCNE1-203ENST00000444983 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
CCNE1-203ENST00000444983 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
CCNE1-203ENST00000444983 TRAV8-1A0A0A6YYK1 113 aa11.15□□□□□ -0.62
CCNE1-203ENST00000444983 CNN1P51911 297 aaKnown RBP11.15□□□□□ -0.62
CCNE1-203ENST00000444983 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
CCNE1-203ENST00000444983 DEFB125Q8N687 156 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms