RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 GCHFRP30047 84 aa13.19□□□□□ -0.3
CIRBP-203ENST00000444172 ICAM4Q14773 271 aa13.19□□□□□ -0.3
CIRBP-203ENST00000444172 TRPT1Q86TN4 253 aaKnown RBP13.19□□□□□ -0.3
CIRBP-203ENST00000444172 HLA-DRB4X5D2U9 266 aa13.19□□□□□ -0.3
CIRBP-203ENST00000444172 CSTL1Q9H114 145 aa13.18□□□□□ -0.3
CIRBP-203ENST00000444172 Q9H3A6 140 aa13.18□□□□□ -0.3
CIRBP-203ENST00000444172 KIR2DL5BA0A0G2JN68 375 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 KIR2DL5BA0A0G2JPC4 375 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 PRAC2D3DTV9 90 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 M0R3E3 92 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 HIST1H1AQ02539 215 aaPredicted RBP13.17□□□□□ -0.3
CIRBP-203ENST00000444172 DPPA3Q6W0C5 159 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 KIR2DL5AQ8N109 375 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 OR8A1Q8NGG7 326 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 KIR2DL5BQ8NHK3 375 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 MAP1LC3BQ9GZQ8 125 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 TMPRSS5Q9H3S3 457 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 TMEM167BQ9NRX6 74 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 PRELID1Q9Y255 219 aa13.17□□□□□ -0.3
CIRBP-203ENST00000444172 MEGF8Q7Z7M0 2845 aa13.16□□□□□ -0.3
CIRBP-203ENST00000444172 A0A1B0GV50 99 aa13.16□□□□□ -0.3
CIRBP-203ENST00000444172 PGPA6NDG6 321 aa13.16□□□□□ -0.3
CIRBP-203ENST00000444172 DUSP14O95147 198 aaKnown RBP13.16□□□□□ -0.3
CIRBP-203ENST00000444172 RAB5CP51148 216 aa13.16□□□□□ -0.3
CIRBP-203ENST00000444172 LYPD1Q8N2G4 141 aa13.16□□□□□ -0.3
CIRBP-203ENST00000444172 OR10J6PQ8NGY7 276 aa13.16□□□□□ -0.3
CIRBP-203ENST00000444172 SFT2D1Q8WV19 159 aa13.16□□□□□ -0.3
CIRBP-203ENST00000444172 ZMAT4Q9H898 229 aa13.16□□□□□ -0.3
CIRBP-203ENST00000444172 PPP1R14DQ9NXH3 145 aa13.16□□□□□ -0.3
CIRBP-203ENST00000444172 CA1P00915 261 aaPredicted RBP13.15□□□□□ -0.3
CIRBP-203ENST00000444172 H2AFB1P0C5Y9 115 aa13.15□□□□□ -0.3
CIRBP-203ENST00000444172 CSN1S1P47710 185 aa13.15□□□□□ -0.3
CIRBP-203ENST00000444172 SULT1A2P50226 295 aa13.15□□□□□ -0.3
CIRBP-203ENST00000444172 CNN1P51911 297 aaKnown RBP13.15□□□□□ -0.3
CIRBP-203ENST00000444172 FXYD7P58549 80 aa13.15□□□□□ -0.3
CIRBP-203ENST00000444172 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
CIRBP-203ENST00000444172 FAM74A1Q5RGS3 127 aa13.15□□□□□ -0.3
CIRBP-203ENST00000444172 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
CIRBP-203ENST00000444172 ALKAL2Q6UX46 152 aa13.15□□□□□ -0.3
CIRBP-203ENST00000444172 MRPL53Q96EL3 112 aaKnown RBP13.15□□□□□ -0.3
CIRBP-203ENST00000444172 UBE2CO00762 179 aa13.14□□□□□ -0.31
CIRBP-203ENST00000444172 NHLRC4P0CG21 123 aaPredicted RBP13.14□□□□□ -0.31
CIRBP-203ENST00000444172 CMTM2Q8TAZ6 248 aa13.14□□□□□ -0.31
CIRBP-203ENST00000444172 SUN5Q8TC36 379 aa13.14□□□□□ -0.31
CIRBP-203ENST00000444172 MBD3L1Q8WWY6 194 aa13.14□□□□□ -0.31
CIRBP-203ENST00000444172 RETNQ9HD89 108 aa13.14□□□□□ -0.31
CIRBP-203ENST00000444172 OTORQ9NRC9 128 aa13.14□□□□□ -0.31
CIRBP-203ENST00000444172 RPH3ALQ9UNE2 315 aa13.14□□□□□ -0.31
CIRBP-203ENST00000444172 UBE2G2P60604 165 aa13.13□□□□□ -0.31
CIRBP-203ENST00000444172 DEFB135Q30KP9 77 aa13.13□□□□□ -0.31
CIRBP-203ENST00000444172 SPATA25Q9BR10 227 aa13.13□□□□□ -0.31
CIRBP-203ENST00000444172 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
CIRBP-203ENST00000444172 ERCC8Q13216 396 aa13.12□□□□□ -0.31
CIRBP-203ENST00000444172 RXFP4Q8TDU9 374 aa13.12□□□□□ -0.31
CIRBP-203ENST00000444172 TM2D3Q9BRN9 247 aa13.12□□□□□ -0.31
CIRBP-203ENST00000444172 XCL2Q9UBD3 114 aa13.12□□□□□ -0.31
CIRBP-203ENST00000444172 IGKV2-40A0A087WW87 121 aaPredicted RBP13.11□□□□□ -0.31
CIRBP-203ENST00000444172 ZNF705EA8MWA4 302 aaPredicted RBP13.11□□□□□ -0.31
CIRBP-203ENST00000444172 IGKV2D-40P01614 121 aaPredicted RBP13.11□□□□□ -0.31
CIRBP-203ENST00000444172 SLC25A5P05141 298 aaKnown RBP13.11□□□□□ -0.31
CIRBP-203ENST00000444172 SUMO1P63165 101 aaKnown RBP13.11□□□□□ -0.31
CIRBP-203ENST00000444172 Q6ZWC4 215 aa13.11□□□□□ -0.31
CIRBP-203ENST00000444172 CLUHP3Q96NS8 147 aa13.11□□□□□ -0.31
CIRBP-203ENST00000444172 GIG44P09565 113 aaPredicted RBP13.1□□□□□ -0.31
CIRBP-203ENST00000444172 RCHY1Q96PM5 261 aa13.1□□□□□ -0.31
CIRBP-203ENST00000444172 A0A1W2PRE2 83 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 A8MTW9 85 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 TEX46H3BTG2 121 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 M0R2Z0 102 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 SPRY2O43597 315 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 GNG5P63218 68 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 SPINK13Q1W4C9 94 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 AMTNQ6UX39 209 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 OVOL2Q9BRP0 275 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 C1QTNF4Q9BXJ3 329 aa13.09□□□□□ -0.31
CIRBP-203ENST00000444172 YTHDF2Q9Y5A9 579 aaKnown RBP13.09□□□□□ -0.31
CIRBP-203ENST00000444172 NPIPB6E9PJ23 425 aa13.08□□□□□ -0.32
CIRBP-203ENST00000444172 TMEM78Q5T7P6 136 aa13.08□□□□□ -0.32
CIRBP-203ENST00000444172 RNF183Q96D59 192 aa13.08□□□□□ -0.32
CIRBP-203ENST00000444172 LINC00477Q96M19 166 aa13.08□□□□□ -0.32
CIRBP-203ENST00000444172 VGLL1Q99990 258 aa13.08□□□□□ -0.32
CIRBP-203ENST00000444172 AGPAT4-IT1Q9H0P7 198 aa13.08□□□□□ -0.32
CIRBP-203ENST00000444172 FAM74A7A6NL05 159 aa13.07□□□□□ -0.32
CIRBP-203ENST00000444172 GGTLC3B5MD39 225 aa13.07□□□□□ -0.32
CIRBP-203ENST00000444172 IFNA7P01567 189 aa13.07□□□□□ -0.32
CIRBP-203ENST00000444172 HBE1P02100 147 aa13.07□□□□□ -0.32
CIRBP-203ENST00000444172 CT45A10P0DMU9 189 aa13.07□□□□□ -0.32
CIRBP-203ENST00000444172 CST9LP1Q5W188 147 aa13.07□□□□□ -0.32
CIRBP-203ENST00000444172 GOLT1AQ6ZVE7 132 aa13.07□□□□□ -0.32
CIRBP-203ENST00000444172 C5orf17Q8NAS9 161 aa13.07□□□□□ -0.32
CIRBP-203ENST00000444172 PRKDCP78527 4128 aaKnown RBP13.07□□□□□ -0.32
CIRBP-203ENST00000444172 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
CIRBP-203ENST00000444172 RBAKDNA6NC62 111 aa13.06□□□□□ -0.32
CIRBP-203ENST00000444172 J3KRW8 73 aa13.06□□□□□ -0.32
CIRBP-203ENST00000444172 PAGE4O60829 102 aa13.06□□□□□ -0.32
CIRBP-203ENST00000444172 BLOC1S1P78537 153 aa13.06□□□□□ -0.32
CIRBP-203ENST00000444172 CCL20P78556 96 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms