RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 LINC00614P0C842 121 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 NMUP48645 174 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 TMEM190Q8WZ59 177 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 LAMTOR2Q9Y2Q5 125 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 CLPSL1A2RUU4 121 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 H7C1H1 209 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 CBLN1P23435 193 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
SMARCA4-204ENST00000444061 KIAA1549Q9HCM3 1950 aa11.15□□□□□ -0.62
SMARCA4-204ENST00000444061 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-204ENST00000444061 DNAJC9-AS1A6NH13 148 aa11.15□□□□□ -0.62
SMARCA4-204ENST00000444061 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-204ENST00000444061 SOX21Q9Y651 276 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-204ENST00000444061 CHD9Q3L8U1 2897 aa11.15□□□□□ -0.62
SMARCA4-204ENST00000444061 CCL20P78556 96 aa11.15□□□□□ -0.62
SMARCA4-204ENST00000444061 TRGV11A0A075B6L2 103 aa11.14□□□□□ -0.63
SMARCA4-204ENST00000444061 C8orf86Q6ZUL3 223 aa11.14□□□□□ -0.63
SMARCA4-204ENST00000444061 ALKBH7Q9BT30 221 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-204ENST00000444061 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
SMARCA4-204ENST00000444061 PRB4P10163 310 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-204ENST00000444061 LOC389332A0A1B0GUA5 103 aa11.14□□□□□ -0.63
SMARCA4-204ENST00000444061 LY6G6DO95868 133 aa11.14□□□□□ -0.63
SMARCA4-204ENST00000444061 HOXD3P31249 432 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 CYYR1Q96J86 154 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 LINC00477Q96M19 166 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 ZNF138P52744 262 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 TMEM136Q6ZRR5 245 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 FER1L6-AS1Q8NA97 138 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 RITA1Q96K30 269 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 ABCA12Q86UK0 2595 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 PSG3Q16557 428 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 C1orf194Q5T5A4 169 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 PAX9P55771 341 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 LYPD1Q8N2G4 141 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 RPP21Q9H633 154 aaKnown RBP11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 RFNGQ9Y644 331 aa11.13□□□□□ -0.63
SMARCA4-204ENST00000444061 LYL1P12980 280 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 HBBP68871 147 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 A6NDX4 124 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 CGB3P0DN86 165 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 CGB7P0DN87 165 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 KMT2EQ8IZD2 1858 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 MUC21A0A0G2JKD1 596 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 MUC21A0A140T8X8 626 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 TNRC6BQ9UPQ9 1833 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 IGLC1P0CG04 106 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 KIAA1644Q3SXP7 199 aa11.12□□□□□ -0.63
SMARCA4-204ENST00000444061 IGHG2P01859 326 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 FXYD7P58549 80 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 PDE6HQ13956 83 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 Q6AWC8 147 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 TCF23Q7RTU1 214 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 A0A1B0GUT8 65 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 ODF3BA8MYP8 253 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 DLEU1O43261 78 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 INSP01308 110 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 TCRAP04437 139 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 AP5S1Q9NUS5 200 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 AMBPP02760 352 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 PYY3Q5JQD4 70 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 ODF3L1Q8IXM7 274 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 MBD6Q96DN6 1003 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 MAP1LC3AQ9H492 121 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 LINC00574Q9H8X3 128 aa11.11□□□□□ -0.63
SMARCA4-204ENST00000444061 SMIM13P0DJ93 91 aa11.1□□□□□ -0.63
SMARCA4-204ENST00000444061 KIR2DL4Q99706 377 aa11.1□□□□□ -0.63
SMARCA4-204ENST00000444061 TRBV20OR9-2A0A075B6H5 130 aa11.1□□□□□ -0.63
SMARCA4-204ENST00000444061 IGHV7-4-1A0A0J9YVY3 117 aa11.1□□□□□ -0.63
SMARCA4-204ENST00000444061 M0R3E3 92 aa11.1□□□□□ -0.63
SMARCA4-204ENST00000444061 GCSHP23434 173 aa11.1□□□□□ -0.63
SMARCA4-204ENST00000444061 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
SMARCA4-204ENST00000444061 TRGV4A0A0C4DH28 118 aa11.1□□□□□ -0.63
SMARCA4-204ENST00000444061 MEGF9Q9H1U4 602 aa11.1□□□□□ -0.63
SMARCA4-204ENST00000444061 A0A1W2PPR1 153 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 SLC17A3O00476 420 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 TRAV12-3A0A0B4J271 114 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 TMEM262E9PQX1 116 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 SERF1AO75920 110 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 NDUFA3O95167 84 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 OR10J3Q5JRS4 329 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 ST6GALNAC6Q969X2 333 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 A0A1B0GW15 77 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 Q6YL49 198 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 FNDC4Q9H6D8 234 aaPredicted RBP11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 PTPRBP23467 1997 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 NUDT3O95989 172 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 ATOH7Q8N100 152 aa11.09□□□□□ -0.63
SMARCA4-204ENST00000444061 CXCL1P09341 107 aa11.08□□□□□ -0.64
SMARCA4-204ENST00000444061 C14orf144Q96I85 54 aa11.08□□□□□ -0.64
SMARCA4-204ENST00000444061 VCX2Q9H322 139 aa11.08□□□□□ -0.64
SMARCA4-204ENST00000444061 IZUMO1RA6ND01 250 aa11.08□□□□□ -0.64
SMARCA4-204ENST00000444061 Q8TAT8 98 aa11.08□□□□□ -0.64
SMARCA4-204ENST00000444061 DOPEY1Q5JWR5 2465 aa11.08□□□□□ -0.64
SMARCA4-204ENST00000444061 TRAV9-2A0A087WT02 112 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms