RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 BAP18Q8IXM2 172 aa13.43□□□□□ -0.26
ATPAF2-201ENST00000444058 OR10J6PQ8NGY7 276 aa13.43□□□□□ -0.26
ATPAF2-201ENST00000444058 THAP6Q8TBB0 222 aa13.43□□□□□ -0.26
ATPAF2-201ENST00000444058 WDR61Q9GZS3 305 aaKnown RBP13.43□□□□□ -0.26
ATPAF2-201ENST00000444058 TRBV19A0A075B6N1 114 aa13.42□□□□□ -0.26
ATPAF2-201ENST00000444058 TRAV12-2A0A075B6T6 113 aa13.42□□□□□ -0.26
ATPAF2-201ENST00000444058 H3BTX0 84 aa13.42□□□□□ -0.26
ATPAF2-201ENST00000444058 HIST1H1EP10412 219 aaKnown RBP13.42□□□□□ -0.26
ATPAF2-201ENST00000444058 CLINT1Q14677 625 aa13.42□□□□□ -0.26
ATPAF2-201ENST00000444058 RPP25LQ8N5L8 163 aaKnown RBP13.42□□□□□ -0.26
ATPAF2-201ENST00000444058 MRPL53Q96EL3 112 aaKnown RBP13.42□□□□□ -0.26
ATPAF2-201ENST00000444058 C20orf144Q9BQM9 153 aa13.42□□□□□ -0.26
ATPAF2-201ENST00000444058 NDUFAF3Q9BU61 184 aa13.42□□□□□ -0.26
ATPAF2-201ENST00000444058 TAS2R60P59551 318 aa13.41□□□□□ -0.26
ATPAF2-201ENST00000444058 ODF3Q96PU9 254 aa13.41□□□□□ -0.26
ATPAF2-201ENST00000444058 LYRM9A8MSI8 78 aa13.4□□□□□ -0.26
ATPAF2-201ENST00000444058 ZNF705GA8MUZ8 300 aaPredicted RBP13.4□□□□□ -0.26
ATPAF2-201ENST00000444058 PRAC2D3DTV9 90 aa13.4□□□□□ -0.26
ATPAF2-201ENST00000444058 C17orf112F2Z3M2 114 aa13.4□□□□□ -0.26
ATPAF2-201ENST00000444058 GCSAMLQ5JQS6 135 aa13.4□□□□□ -0.26
ATPAF2-201ENST00000444058 LINC01587Q99440 93 aa13.4□□□□□ -0.26
ATPAF2-201ENST00000444058 ATP5SQ99766 215 aa13.4□□□□□ -0.26
ATPAF2-201ENST00000444058 PRELID1Q9Y255 219 aa13.4□□□□□ -0.26
ATPAF2-201ENST00000444058 VPS13DQ5THJ4 4388 aa13.4□□□□□ -0.26
ATPAF2-201ENST00000444058 KMT2AQ03164 3969 aa13.39□□□□□ -0.27
ATPAF2-201ENST00000444058 NPIPB6E9PJ23 425 aa13.39□□□□□ -0.27
ATPAF2-201ENST00000444058 H7BYZ3 331 aa13.39□□□□□ -0.27
ATPAF2-201ENST00000444058 PTTG1O95997 202 aa13.39□□□□□ -0.27
ATPAF2-201ENST00000444058 MRPL32Q9BYC8 188 aaKnown RBP13.39□□□□□ -0.27
ATPAF2-201ENST00000444058 HSPB11Q9Y547 144 aa13.39□□□□□ -0.27
ATPAF2-201ENST00000444058 NDUFB4O95168 129 aa13.38□□□□□ -0.27
ATPAF2-201ENST00000444058 RPL12P30050 165 aaKnown RBP13.38□□□□□ -0.27
ATPAF2-201ENST00000444058 ZNF493Q6ZR52 646 aa13.38□□□□□ -0.27
ATPAF2-201ENST00000444058 FAM167A-AS1Q96KT0 104 aa13.38□□□□□ -0.27
ATPAF2-201ENST00000444058 SLC25A2Q9BXI2 301 aa13.38□□□□□ -0.27
ATPAF2-201ENST00000444058 TIMM9Q9Y5J7 89 aa13.38□□□□□ -0.27
ATPAF2-201ENST00000444058 PLAC8L1A1L4L8 177 aa13.37□□□□□ -0.27
ATPAF2-201ENST00000444058 P0DMU3 169 aa13.37□□□□□ -0.27
ATPAF2-201ENST00000444058 FAM231AP0DMU4 169 aa13.37□□□□□ -0.27
ATPAF2-201ENST00000444058 FAM231CP0DMU5 169 aa13.37□□□□□ -0.27
ATPAF2-201ENST00000444058 PYYP10082 97 aa13.37□□□□□ -0.27
ATPAF2-201ENST00000444058 DAD1P61803 113 aa13.37□□□□□ -0.27
ATPAF2-201ENST00000444058 C16orf74Q96GX8 76 aa13.37□□□□□ -0.27
ATPAF2-201ENST00000444058 PLA2G2EQ9NZK7 142 aa13.37□□□□□ -0.27
ATPAF2-201ENST00000444058 MBD2Q9UBB5 411 aa13.37□□□□□ -0.27
ATPAF2-201ENST00000444058 BIRC6Q9NR09 4857 aa13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 PRM2P04554 102 aa13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 AZU1P20160 251 aa13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 LEPP41159 167 aa13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 MIR17HGQ75NE6 70 aa13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 PARD6GQ9BYG4 376 aaPredicted RBP13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 OR51M1Q9H341 326 aa13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 AAMDCQ9H7C9 122 aa13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 FUT9Q9Y231 359 aa13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 ALG5Q9Y673 324 aa13.36□□□□□ -0.27
ATPAF2-201ENST00000444058 M0R3E3 92 aa13.35□□□□□ -0.27
ATPAF2-201ENST00000444058 IFNA5P01569 189 aa13.35□□□□□ -0.27
ATPAF2-201ENST00000444058 NBEAP1P0C6P0 100 aa13.35□□□□□ -0.27
ATPAF2-201ENST00000444058 CT45A10P0DMU9 189 aa13.35□□□□□ -0.27
ATPAF2-201ENST00000444058 PRB4P10163 310 aaPredicted RBP13.35□□□□□ -0.27
ATPAF2-201ENST00000444058 GFI1BQ5VTD9 330 aa13.35□□□□□ -0.27
ATPAF2-201ENST00000444058 SCGB1C1Q8TD33 95 aa13.35□□□□□ -0.27
ATPAF2-201ENST00000444058 TMEM263Q8WUH6 116 aaKnown RBP13.35□□□□□ -0.27
ATPAF2-201ENST00000444058 LINC00477Q96M19 166 aa13.35□□□□□ -0.27
ATPAF2-201ENST00000444058 KIR3DS1Q14943 382 aa13.34□□□□□ -0.27
ATPAF2-201ENST00000444058 RNASE8Q8TDE3 154 aaKnown RBP13.34□□□□□ -0.27
ATPAF2-201ENST00000444058 BLNKQ8WV28 456 aa13.34□□□□□ -0.27
ATPAF2-201ENST00000444058 TIMM8BQ9Y5J9 83 aaPredicted RBP13.34□□□□□ -0.27
ATPAF2-201ENST00000444058 POM121L12Q8N7R1 296 aa13.33□□□□□ -0.28
ATPAF2-201ENST00000444058 FXYD5Q96DB9 178 aa13.33□□□□□ -0.28
ATPAF2-201ENST00000444058 PAXXQ9BUH6 204 aa13.33□□□□□ -0.28
ATPAF2-201ENST00000444058 SLC25A5P05141 298 aaKnown RBP13.32□□□□□ -0.28
ATPAF2-201ENST00000444058 NMBP08949 121 aa13.32□□□□□ -0.28
ATPAF2-201ENST00000444058 HTN1P15515 57 aa13.32□□□□□ -0.28
ATPAF2-201ENST00000444058 C9orf47Q6ZRZ4 202 aa13.32□□□□□ -0.28
ATPAF2-201ENST00000444058 CCDC28AQ8IWP9 274 aa13.32□□□□□ -0.28
ATPAF2-201ENST00000444058 EXOC3-AS1Q8N2X6 119 aa13.32□□□□□ -0.28
ATPAF2-201ENST00000444058 RNF141Q8WVD5 230 aa13.32□□□□□ -0.28
ATPAF2-201ENST00000444058 FAM19A4Q96LR4 140 aa13.32□□□□□ -0.28
ATPAF2-201ENST00000444058 SMIM3Q9BZL3 60 aa13.32□□□□□ -0.28
ATPAF2-201ENST00000444058 CBY3A6NI87 242 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 KLLNB2CW77 178 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 DEFB130BP0DP73 79 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 DEFB130AP0DP74 79 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 HTN3P15516 51 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 ICAM4Q14773 271 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 FFAR4Q5NUL3 377 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 LYPD1Q8N2G4 141 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 ASB13Q8WXK3 278 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 PYGO2Q9BRQ0 406 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 AGPAT4-IT1Q9H0P7 198 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 MED28Q9H204 178 aa13.31□□□□□ -0.28
ATPAF2-201ENST00000444058 OR10J4P0C629 311 aa13.3□□□□□ -0.28
ATPAF2-201ENST00000444058 TAS2R45P59539 299 aa13.3□□□□□ -0.28
ATPAF2-201ENST00000444058 C15orf53Q8NAA6 179 aa13.3□□□□□ -0.28
ATPAF2-201ENST00000444058 TRAV12-3A0A0B4J271 114 aa13.29□□□□□ -0.28
ATPAF2-201ENST00000444058 OR7C2O60412 319 aa13.29□□□□□ -0.28
ATPAF2-201ENST00000444058 ATP5G1P05496 136 aa13.29□□□□□ -0.28
ATPAF2-201ENST00000444058 CRISP2P16562 243 aa13.29□□□□□ -0.28
ATPAF2-201ENST00000444058 ATP5G3P48201 142 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms