RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 PAXXQ9BUH6 204 aa7.52□□□□□ -1.21
HLA-DQB1-206ENST00000443574 SLC25A2Q9BXI2 301 aa7.52□□□□□ -1.21
HLA-DQB1-206ENST00000443574 OR51M1Q9H341 326 aa7.52□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ZNF586Q9NXT0 402 aa7.52□□□□□ -1.21
HLA-DQB1-206ENST00000443574 TNFSF18Q9UNG2 199 aa7.52□□□□□ -1.21
HLA-DQB1-206ENST00000443574 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
HLA-DQB1-206ENST00000443574 TENM2Q9NT68 2774 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 IGHV4-28A0A0C4DH34 117 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 TEX48A0A1B0GUV7 120 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RNF222A6NCQ9 220 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ARPC5O15511 151 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 HBE1P02100 147 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 MBP02144 154 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 HLA-DMBP28068 263 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 SPINK13Q1W4C9 94 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ZNF705AQ6ZN79 300 aaPredicted RBP7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 PQLC2Q6ZP29 291 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 OR2G3Q8NGZ4 309 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 SAT2Q96F10 170 aaPredicted RBP7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 NEU1Q99519 415 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RFNGQ9Y644 331 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 X6R8D5 127 aa7.51□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ZNF705FA8MVS1 300 aaPredicted RBP7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 M0R2Z0 102 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 TAAR5O14804 337 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 JTBO76095 146 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 OR10J4P0C629 311 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 NBEAP1P0C6P0 100 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ZNF705DP0CH99 300 aaPredicted RBP7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ZNF705BP0CI00 300 aaPredicted RBP7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 CDKN1BP46527 198 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 CSN1S1P47710 185 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 CDC34P49427 236 aaPredicted RBP7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 SERF2P84101 59 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RRN3P1Q2M238 152 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 FAM74A1Q5RGS3 127 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 AMTNQ6UX39 209 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 TMEM256Q8N2U0 113 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 OR10G4Q8NGN3 311 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 OR10G9Q8NGN4 311 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 OR10G7Q8NGN6 311 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RNF141Q8WVD5 230 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 FAM167A-AS1Q96KT0 104 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 WFDC1Q9HC57 220 aa7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 KLK5Q9Y337 293 aaPredicted RBP7.5□□□□□ -1.21
HLA-DQB1-206ENST00000443574 C11orf94C9JXX5 98 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 DEFB4AO15263 64 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ATP6V0CP27449 155 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 LEPP41159 167 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ZNF345Q14585 488 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ICAM4Q14773 271 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 FAM122CQ6P4D5 195 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 LYPD1Q8N2G4 141 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 FXYD5Q96DB9 178 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ODF3Q96PU9 254 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 C20orf144Q9BQM9 153 aa7.49□□□□□ -1.21
HLA-DQB1-206ENST00000443574 STARD9Q9P2P6 4700 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 LOC102723971A0A1B0GUV8 181 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 NPIPB6E9PJ23 425 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 M0R3E3 92 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 NDUFB4O95168 129 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RAB2AP61019 212 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 Q5BKY6 102 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 TMEM78Q5T7P6 136 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 BAP18Q8IXM2 172 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 EXOC3-AS1Q8N2X6 119 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 PHYHIPLQ96FC7 376 aa7.48□□□□□ -1.21
HLA-DQB1-206ENST00000443574 TRAV12-2A0A075B6T6 113 aa7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 SPART-AS1P0CW21 52 aa7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RBMY1A1P0DJD3 496 aaKnown RBP7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RBMY1CP0DJD4 496 aa7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 NANOS2P60321 138 aaKnown RBP7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RANP62826 216 aaKnown RBP7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RBMY1FQ15415 496 aaKnown RBP7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RPL7L1Q6DKI1 246 aaKnown RBP7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 CEMP1Q6PRD7 247 aaPredicted RBP7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 C1orf158Q8N1D5 194 aa7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RPP25LQ8N5L8 163 aaKnown RBP7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 CMTM2Q8TAZ6 248 aa7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 RXFP4Q8TDU9 374 aa7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 PHLDA1Q8WV24 401 aaPredicted RBP7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ARPC5LQ9BPX5 153 aa7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 ACTR3CQ9C0K3 210 aaPredicted RBP7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 Q9H3A6 140 aa7.47□□□□□ -1.21
HLA-DQB1-206ENST00000443574 A0A0D9SG52 128 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 KANTRA0A1W2PQU2 76 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 HMSDA8MTL9 139 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 PRAC2D3DTV9 90 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 G3V3Q6 166 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 H7BYZ3 331 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 CRXO43186 299 aaPredicted RBP7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 SLC25A5P05141 298 aaKnown RBP7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 STAG3L2P0CL84 134 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 STAG3L3P0CL85 134 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 ARL14EPLP0DKL9 152 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 EMP1P54849 157 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 EIF5AP63241 154 aaKnown RBP7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 AKR1C8PQ5T2L2 129 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 LINC00477Q96M19 166 aa7.46□□□□□ -1.22
HLA-DQB1-206ENST00000443574 LINC01587Q99440 93 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms