RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 FXYD5Q96DB9 178 aa7.9□□□□□ -1.14
HDAC6-211ENST00000443563 RFNGQ9Y644 331 aa7.9□□□□□ -1.14
HDAC6-211ENST00000443563 ZNF705EA8MWA4 302 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-211ENST00000443563 NDUFB4O95168 129 aa7.89□□□□□ -1.15
HDAC6-211ENST00000443563 OR10J4P0C629 311 aa7.89□□□□□ -1.15
HDAC6-211ENST00000443563 EIF5AP63241 154 aaKnown RBP7.89□□□□□ -1.15
HDAC6-211ENST00000443563 FAM74A1Q5RGS3 127 aa7.89□□□□□ -1.15
HDAC6-211ENST00000443563 AKR1C8PQ5T2L2 129 aa7.89□□□□□ -1.15
HDAC6-211ENST00000443563 OR11H4Q8NGC9 324 aa7.89□□□□□ -1.15
HDAC6-211ENST00000443563 ST6GAL2Q96JF0 529 aa7.89□□□□□ -1.15
HDAC6-211ENST00000443563 ACTR3CQ9C0K3 210 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-211ENST00000443563 SLC35B3Q9H1N7 401 aa7.89□□□□□ -1.15
HDAC6-211ENST00000443563 SH3BGRL3Q9H299 93 aa7.89□□□□□ -1.15
HDAC6-211ENST00000443563 C11orf68Q9H3H3 251 aaKnown RBP7.89□□□□□ -1.15
HDAC6-211ENST00000443563 GOLT1BQ9Y3E0 138 aa7.89□□□□□ -1.15
HDAC6-211ENST00000443563 A0A0J9YWU9 116 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 SMIM9A6NGZ8 99 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 ZNF705FA8MVS1 300 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-211ENST00000443563 BOLA2-SMG1P6H3BVE0 249 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 BCL2L11O43521 198 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 PFDN1O60925 122 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 ZNF705DP0CH99 300 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-211ENST00000443563 ZNF705BP0CI00 300 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-211ENST00000443563 TSPOP30536 169 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 CSN1S1P47710 185 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 FXYD7P58549 80 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 ICAM4Q14773 271 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 AMTNQ6UX39 209 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 AKAP14Q86UN6 197 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 RPP25LQ8N5L8 163 aaKnown RBP7.88□□□□□ -1.15
HDAC6-211ENST00000443563 ZNF503Q96F45 646 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 IGF2BP2-AS1Q96M15 143 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 NEU1Q99519 415 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 CYTL1Q9NRR1 136 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 CSMD3Q7Z407 3707 aa7.88□□□□□ -1.15
HDAC6-211ENST00000443563 hCG_2014768A0A024R1R8 64 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 NPIPB6E9PJ23 425 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 CXorf1O96002 111 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 INSP01308 110 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 C1QBP02746 253 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 STAG3L2P0CL84 134 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 STAG3L3P0CL85 134 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 RANP62826 216 aaKnown RBP7.87□□□□□ -1.15
HDAC6-211ENST00000443563 SPINK13Q1W4C9 94 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 EXOC3-AS1Q8N2X6 119 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 RAB24Q969Q5 203 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 PHYHIPLQ96FC7 376 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 LINC00477Q96M19 166 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 ODF3Q96PU9 254 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 TMEM208Q9BTX3 173 aa7.87□□□□□ -1.15
HDAC6-211ENST00000443563 ZNF471Q9BX82 626 aaPredicted RBP7.87□□□□□ -1.15
HDAC6-211ENST00000443563 CTXND1A0A1B0GTU2 59 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 TMEM189A5PLL7 270 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 PRAC2D3DTV9 90 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 M0R2Z0 102 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 M0R3E3 92 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 SEC11BP0C7V7 166 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 ARL14EPLP0DKL9 152 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 LEPP41159 167 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 CDKN1BP46527 198 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 TMEM78Q5T7P6 136 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 ZNF705AQ6ZN79 300 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-211ENST00000443563 TMUB2Q71RG4 321 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 TMEM256Q8N2U0 113 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 ARL6IP6Q8N6S5 226 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 Q8NAQ8 132 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 RXFP4Q8TDU9 374 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 HYLS1Q96M11 299 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 C20orf144Q9BQM9 153 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 Q9H3A6 140 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 OTORQ9NRC9 128 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 TMEM167BQ9NRX6 74 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 X6R8D5 127 aa7.86□□□□□ -1.15
HDAC6-211ENST00000443563 IGHV3OR16-12A0A075B7B8 117 aa7.85□□□□□ -1.15
HDAC6-211ENST00000443563 IGHV4-28A0A0C4DH34 117 aa7.85□□□□□ -1.15
HDAC6-211ENST00000443563 UMAD1C9J7I0 102 aa7.85□□□□□ -1.15
HDAC6-211ENST00000443563 HMGB3O15347 200 aaKnown RBP7.85□□□□□ -1.15
HDAC6-211ENST00000443563 HBE1P02100 147 aa7.85□□□□□ -1.15
HDAC6-211ENST00000443563 SLC25A5P05141 298 aaKnown RBP7.85□□□□□ -1.15
HDAC6-211ENST00000443563 TPT1P13693 172 aaKnown RBP7.85□□□□□ -1.15
HDAC6-211ENST00000443563 CMTM2Q8TAZ6 248 aa7.85□□□□□ -1.15
HDAC6-211ENST00000443563 DYNC2H1Q8NCM8 4307 aaKnown RBP7.85□□□□□ -1.15
HDAC6-211ENST00000443563 RBAKDNA6NC62 111 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 PGPA6NDG6 321 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 CRXO43186 299 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-211ENST00000443563 EIF3GO75821 320 aaKnown RBP eCLIP7.84□□□□□ -1.15
HDAC6-211ENST00000443563 GCHFRP30047 84 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 EIF5AL1Q6IS14 154 aaKnown RBP7.84□□□□□ -1.15
HDAC6-211ENST00000443563 C9orf47Q6ZRZ4 202 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 BAP18Q8IXM2 172 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 C1orf158Q8N1D5 194 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 STOML3Q8TAV4 291 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 C11orf45Q8TAV5 145 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 SUN5Q8TC36 379 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 TENM2Q9NT68 2774 aa7.84□□□□□ -1.15
HDAC6-211ENST00000443563 TRAV12-2A0A075B6T6 113 aa7.83□□□□□ -1.16
HDAC6-211ENST00000443563 NMBP08949 121 aa7.83□□□□□ -1.16
HDAC6-211ENST00000443563 CT45A10P0DMU9 189 aa7.83□□□□□ -1.16
HDAC6-211ENST00000443563 RRN3P1Q2M238 152 aa7.83□□□□□ -1.16
HDAC6-211ENST00000443563 LGALSLQ3ZCW2 172 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms