RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 RHPN1-AS1Q9BWJ2 59 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 ZNF705FA8MVS1 300 aaPredicted RBP11.14□□□□□ -0.63
LINC00299-202ENST00000442956 C1orf196B1AJZ1 125 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 K7EMT4 169 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 CHEK1O14757 476 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 FOXL1Q12952 345 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 ZFP82Q8N141 532 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 RNF182Q8N6D2 247 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 ARL6IP6Q8N6S5 226 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 IL36BQ9NZH7 164 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 PSG8Q9UQ74 426 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 HIVEP1P15822 2718 aa11.14□□□□□ -0.63
LINC00299-202ENST00000442956 IGHV4OR15-8A0A075B7B6 117 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 A0A087WW49 117 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 IGKV2-40A0A087WW87 121 aaPredicted RBP11.13□□□□□ -0.63
LINC00299-202ENST00000442956 SERTM2A0A1B0GWG4 89 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 IGKV2D-40P01614 121 aaPredicted RBP11.13□□□□□ -0.63
LINC00299-202ENST00000442956 TCTEX1D4Q5JR98 221 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 LCN12Q6JVE5 192 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 TMEM183AQ8IXX5 376 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 UFC1Q9Y3C8 167 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 FAM231DQ6ZW35 169 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 Q71RC1 249 aaPredicted RBP11.13□□□□□ -0.63
LINC00299-202ENST00000442956 ASCL2Q99929 193 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 SMPXQ9UHP9 88 aa11.13□□□□□ -0.63
LINC00299-202ENST00000442956 TRAV8-2A0A0B4J237 113 aa11.12□□□□□ -0.63
LINC00299-202ENST00000442956 ZNF705GA8MUZ8 300 aaPredicted RBP11.12□□□□□ -0.63
LINC00299-202ENST00000442956 EDN2P20800 178 aa11.12□□□□□ -0.63
LINC00299-202ENST00000442956 HILS1P60008 231 aa11.12□□□□□ -0.63
LINC00299-202ENST00000442956 RAB5BP61020 215 aa11.12□□□□□ -0.63
LINC00299-202ENST00000442956 C18orf65Q6ZTR6 163 aa11.12□□□□□ -0.63
LINC00299-202ENST00000442956 NUDT10Q8NFP7 164 aa11.12□□□□□ -0.63
LINC00299-202ENST00000442956 NUDT11Q96G61 164 aa11.12□□□□□ -0.63
LINC00299-202ENST00000442956 ZFP30Q9Y2G7 519 aa11.12□□□□□ -0.63
LINC00299-202ENST00000442956 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
LINC00299-202ENST00000442956 HOXD3P31249 432 aaPredicted RBP11.11□□□□□ -0.63
LINC00299-202ENST00000442956 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
LINC00299-202ENST00000442956 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
LINC00299-202ENST00000442956 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
LINC00299-202ENST00000442956 LINC00322Q6ZN03 302 aaPredicted RBP11.11□□□□□ -0.63
LINC00299-202ENST00000442956 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
LINC00299-202ENST00000442956 BIN3Q9NQY0 253 aa11.11□□□□□ -0.63
LINC00299-202ENST00000442956 NSD1Q96L73 2696 aaPredicted RBP11.11□□□□□ -0.63
LINC00299-202ENST00000442956 TMEM213A2RRL7 107 aa11.1□□□□□ -0.63
LINC00299-202ENST00000442956 PRAC2D3DTV9 90 aa11.1□□□□□ -0.63
LINC00299-202ENST00000442956 GATCO43716 136 aaKnown RBP11.1□□□□□ -0.63
LINC00299-202ENST00000442956 CA1P00915 261 aaPredicted RBP11.1□□□□□ -0.63
LINC00299-202ENST00000442956 DEFB136Q30KP8 78 aa11.1□□□□□ -0.63
LINC00299-202ENST00000442956 VGLL1Q99990 258 aa11.1□□□□□ -0.63
LINC00299-202ENST00000442956 SRD5A3Q9H8P0 318 aa11.1□□□□□ -0.63
LINC00299-202ENST00000442956 SELENOKQ9Y6D0 94 aa11.1□□□□□ -0.63
LINC00299-202ENST00000442956 LOC105371267A0A1B0GV96 52 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 TRGC2P03986 189 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 REC114Q7Z4M0 266 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 C4orf3Q8WVX3 66 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 ZC2HC1AQ96GY0 325 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 NRN1Q9NPD7 142 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 IGKV3-7A0A075B6H7 116 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 C19orf71A6NCJ1 209 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 A8MWP6 167 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 TYMSP04818 313 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 TCL1AP56279 114 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 HIST2H2BDQ6DRA6 164 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 GBGT1Q8N5D6 347 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
LINC00299-202ENST00000442956 BTF3L4Q96K17 158 aa11.09□□□□□ -0.63
LINC00299-202ENST00000442956 FBLL1A6NHQ2 334 aaKnown RBP11.08□□□□□ -0.64
LINC00299-202ENST00000442956 INAFM1C9JVW0 142 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 LGALS9O00182 355 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 LINC01006Q8NI28 216 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 Q8TAT8 98 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 MRPL53Q96EL3 112 aaKnown RBP11.08□□□□□ -0.64
LINC00299-202ENST00000442956 DAZAP1Q96EP5 407 aaKnown RBP11.08□□□□□ -0.64
LINC00299-202ENST00000442956 C16orf95Q9H693 158 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 CLEC5AQ9NY25 188 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 TRAV9-1A0A075B6T8 112 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 SMIM27A0A1W2PRY6 76 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 SOCS3O14543 225 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 P01737 135 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 BMI1P35226 326 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 C8orf49Q96NF6 230 aa11.08□□□□□ -0.64
LINC00299-202ENST00000442956 SLURP1P55000 103 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 ERCC8Q13216 396 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 KLF5Q13887 457 aaPredicted RBP11.07□□□□□ -0.64
LINC00299-202ENST00000442956 KLHL30-AS1Q8NEE0 82 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 PRR25Q96S07 402 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 JMJD8Q96S16 334 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 RPP21Q9H633 154 aaKnown RBP11.07□□□□□ -0.64
LINC00299-202ENST00000442956 RBAKDNA6NC62 111 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 LINC01619G3V211 115 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 FOSL1P15407 271 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 C11orf44Q8N8P7 122 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 DPF1Q92782 380 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 C20orf173Q96LM9 149 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 DUX3Q96PT4 197 aa11.07□□□□□ -0.64
LINC00299-202ENST00000442956 ZNF738Q8NE65 137 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms