RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ZNF702PQ9H963 129 aa10.12□□□□□ -0.79
CPSF4-206ENST00000441580 PEF1Q9UBV8 284 aaKnown RBP10.12□□□□□ -0.79
CPSF4-206ENST00000441580 IGKV2-40A0A087WW87 121 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-206ENST00000441580 HOXA3O43365 443 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-206ENST00000441580 IGKV2D-40P01614 121 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-206ENST00000441580 TRBV12-3P01733 135 aa10.11□□□□□ -0.79
CPSF4-206ENST00000441580 RBPMS2Q6ZRY4 209 aaKnown RBP10.11□□□□□ -0.79
CPSF4-206ENST00000441580 C8orf86Q6ZUL3 223 aa10.11□□□□□ -0.79
CPSF4-206ENST00000441580 Q8N2B8 174 aa10.11□□□□□ -0.79
CPSF4-206ENST00000441580 WFDC11Q8NEX6 87 aa10.11□□□□□ -0.79
CPSF4-206ENST00000441580 OR2D3Q8NGH3 330 aa10.11□□□□□ -0.79
CPSF4-206ENST00000441580 DAZ1Q9NQZ3 744 aaKnown RBP10.11□□□□□ -0.79
CPSF4-206ENST00000441580 KMT2BQ9UMN6 2715 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-206ENST00000441580 A0A1B0GXF2 115 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 K7EMT4 169 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 ZNF207O43670 478 aaKnown RBP10.1□□□□□ -0.79
CPSF4-206ENST00000441580 RAB4BP61018 213 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 HBBP68871 147 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 SCGB2A2Q13296 93 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 FAM106AQ4KMX7 169 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 FAM162BQ5T6X4 162 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 LINC00322Q6ZN03 302 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-206ENST00000441580 MYOZ3Q8TDC0 251 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 C12orf57Q99622 126 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 UFC1Q9Y3C8 167 aa10.1□□□□□ -0.79
CPSF4-206ENST00000441580 IGHV3-66A0A0C4DH42 116 aa10.09□□□□□ -0.79
CPSF4-206ENST00000441580 IGHV7-4-1A0A0J9YVY3 117 aa10.09□□□□□ -0.79
CPSF4-206ENST00000441580 A0A1B0GW15 77 aa10.09□□□□□ -0.79
CPSF4-206ENST00000441580 IFITM10A6NMD0 228 aa10.09□□□□□ -0.79
CPSF4-206ENST00000441580 APOHP02749 345 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-206ENST00000441580 LGALS1P09382 135 aaKnown RBP10.09□□□□□ -0.79
CPSF4-206ENST00000441580 RPS20P60866 119 aaKnown RBP10.09□□□□□ -0.79
CPSF4-206ENST00000441580 LCN12Q6JVE5 192 aa10.09□□□□□ -0.79
CPSF4-206ENST00000441580 UNQ9165/PRO28630Q6UXU0 137 aa10.09□□□□□ -0.79
CPSF4-206ENST00000441580 RNF152Q8N8N0 203 aa10.09□□□□□ -0.79
CPSF4-206ENST00000441580 PRR25Q96S07 402 aa10.09□□□□□ -0.79
CPSF4-206ENST00000441580 PTPN13Q12923 2485 aa10.09□□□□□ -0.79
CPSF4-206ENST00000441580 CREBBPQ92793 2442 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 NAV2Q8IVL1 2488 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 CD5LO43866 347 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 APCSP02743 223 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 CRISP2P16562 243 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 SRSF2Q01130 221 aaKnown RBP10.08□□□□□ -0.8
CPSF4-206ENST00000441580 GPHB5Q86YW7 130 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 SIGLECL1Q8N7X8 197 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 TMEM18Q96B42 140 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 BORCS7Q96B45 105 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 PACRGQ96M98 296 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-206ENST00000441580 GPR61Q9BZJ8 451 aa10.08□□□□□ -0.8
CPSF4-206ENST00000441580 FBN2P35556 2912 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 USP9YO00507 2555 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-206ENST00000441580 IGHV3OR16-13A0A075B7E8 117 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 IGHV3-49A0A0A0MS15 119 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 IGHV3-74A0A0B4J1X5 117 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 TRAV8-2A0A0B4J237 113 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 SPINK4O60575 86 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 SH2D1AO60880 128 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 FABP4P15090 132 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 Q0VG73 95 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 PDZD11Q5EBL8 140 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 OR10J3Q5JRS4 329 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 DNLZQ5SXM8 178 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 TCF24Q7RTU0 167 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 REC114Q7Z4M0 266 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 C16orf92Q96LL3 132 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 C8orf49Q96NF6 230 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 HIST1H2BLQ99880 126 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 NRN1Q9NPD7 142 aa10.07□□□□□ -0.8
CPSF4-206ENST00000441580 A8MWP6 167 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 SMAD7O15105 426 aaKnown RBP10.06□□□□□ -0.8
CPSF4-206ENST00000441580 HLA-DMBP28068 263 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 FOXA3P55318 350 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-206ENST00000441580 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 HIST2H2BCQ6DN03 193 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 LCNL1Q6ZST4 164 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 Q8TAT8 98 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 GTSF1Q8WW33 167 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 UBE2E2Q96LR5 201 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 VGLL1Q99990 258 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 PPP1R14DQ9NXH3 145 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 LENEPQ9Y5L5 61 aa10.06□□□□□ -0.8
CPSF4-206ENST00000441580 TMEM189A5PLL7 270 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 HAX1O00165 279 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 SOCS3O14543 225 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 OVOL1O14753 267 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 AMBPP02760 352 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 ESDP10768 282 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 RIGQ13278 110 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 C9orf47Q6ZRZ4 202 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 RNF182Q8N6D2 247 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 ZNF738Q8NE65 137 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 OR10D4PQ8NGN7 298 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 RHPN1-AS1Q9BWJ2 59 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 SMPXQ9UHP9 88 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 DOPEY2Q9Y3R5 2298 aa10.05□□□□□ -0.8
CPSF4-206ENST00000441580 A0A1B0GUT8 65 aa10.04□□□□□ -0.8
CPSF4-206ENST00000441580 ZNF705FA8MVS1 300 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-206ENST00000441580 LGALS9O00182 355 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms