RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 SHISA2Q6UWI4 295 aa10.84□□□□□ -0.67
LINC02048-201ENST00000440556 Q8N8P6 123 aa10.84□□□□□ -0.67
LINC02048-201ENST00000440556 TTTY13Q9BZ97 58 aa10.84□□□□□ -0.67
LINC02048-201ENST00000440556 A0A087WX48 190 aa10.83□□□□□ -0.68
LINC02048-201ENST00000440556 MYMXA0A1B0GTQ4 84 aa10.83□□□□□ -0.68
LINC02048-201ENST00000440556 NTN3O00634 580 aaPredicted RBP10.83□□□□□ -0.68
LINC02048-201ENST00000440556 LHBP01229 141 aa10.83□□□□□ -0.68
LINC02048-201ENST00000440556 IGHV1-2P23083 117 aa10.83□□□□□ -0.68
LINC02048-201ENST00000440556 HERV-K104P63124 156 aa10.83□□□□□ -0.68
LINC02048-201ENST00000440556 VMA21Q3ZAQ7 101 aa10.83□□□□□ -0.68
LINC02048-201ENST00000440556 PMS2CLQ68D20 193 aa10.83□□□□□ -0.68
LINC02048-201ENST00000440556 EXOC3-AS1Q8N2X6 119 aa10.83□□□□□ -0.68
LINC02048-201ENST00000440556 MAPKAPK5-AS1Q8N8E1 139 aa10.83□□□□□ -0.68
LINC02048-201ENST00000440556 A8MWV9 139 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 UTF1Q5T230 341 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 HES3Q5TGS1 186 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 C1orf162Q8NEQ5 155 aaPredicted RBP10.82□□□□□ -0.68
LINC02048-201ENST00000440556 CARD19Q96LW7 228 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 NGBQ9NPG2 151 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 FSCN3Q9NQT6 498 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 TMEM160Q9NX00 188 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 CACNA1EQ15878 2313 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 H3BTX0 84 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 CEACAM4O75871 244 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 PSMB2P49721 201 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 UBE2D3P61077 147 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 UBE2D2P62837 147 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 GAGE2BQ13066 116 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 FHL3Q13643 280 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 GAGE2EQ4V326 116 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 WFDC3Q8IUB2 231 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 FAM169BQ8N8A8 192 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 OR11H6Q8NGC7 330 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 GAGE2DQ9UEU5 116 aa10.82□□□□□ -0.68
LINC02048-201ENST00000440556 PI4KAP42356 2102 aa10.81□□□□□ -0.68
LINC02048-201ENST00000440556 IGHV3OR15-7A0A075B7D8 119 aa10.81□□□□□ -0.68
LINC02048-201ENST00000440556 TRAV40A0A0B4J280 105 aa10.81□□□□□ -0.68
LINC02048-201ENST00000440556 E7EUB6 86 aa10.81□□□□□ -0.68
LINC02048-201ENST00000440556 RBP4P02753 201 aa10.81□□□□□ -0.68
LINC02048-201ENST00000440556 PPIFP30405 207 aaKnown RBP10.81□□□□□ -0.68
LINC02048-201ENST00000440556 RPL32P62910 135 aaKnown RBP10.81□□□□□ -0.68
LINC02048-201ENST00000440556 LPAL2Q16609 132 aa10.81□□□□□ -0.68
LINC02048-201ENST00000440556 GLMPQ8WWB7 406 aa10.81□□□□□ -0.68
LINC02048-201ENST00000440556 MRPL20Q9BYC9 149 aaKnown RBP10.81□□□□□ -0.68
LINC02048-201ENST00000440556 TNCP24821 2201 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 SH2D1AO60880 128 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 TNFRSF6BO95407 300 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 NDUFV3P56181 108 aaKnown RBP10.8□□□□□ -0.68
LINC02048-201ENST00000440556 PDE6HQ13956 83 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 SIGLEC15Q6ZMC9 328 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 C1orf122Q6ZSJ8 110 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 CNFNQ9BYD5 112 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 TNFRSF18Q9Y5U5 241 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 A0A1W2PPI3 338 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 H7C1H1 209 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 IGHV3-48P01763 117 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 IGLC6P0CF74 106 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 NHLRC4P0CG21 123 aaPredicted RBP10.8□□□□□ -0.68
LINC02048-201ENST00000440556 UBE2D1P51668 147 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 LYZP61626 148 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 TTC32Q5I0X7 151 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 Q6ZT83 130 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 RNF185Q96GF1 192 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 SHANK2-AS3Q9BTD1 123 aa10.8□□□□□ -0.68
LINC02048-201ENST00000440556 MRPL35Q9NZE8 188 aaKnown RBP10.8□□□□□ -0.68
LINC02048-201ENST00000440556 SPEGQ15772 3267 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 GPR179Q6PRD1 2367 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 FABP5P3A8MUU1 101 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 SMKR1H3BMG3 65 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 SNCGO76070 127 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 CFIP05156 583 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 IFITM1P13164 125 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 ARL3P36405 182 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 PIP4P1Q86T03 277 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 C8orf31Q8N9H6 132 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 AAMDCQ9H7C9 122 aa10.79□□□□□ -0.68
LINC02048-201ENST00000440556 LYZL6O75951 148 aa10.78□□□□□ -0.68
LINC02048-201ENST00000440556 IGLV2-23P01705 113 aa10.78□□□□□ -0.68
LINC02048-201ENST00000440556 CLEC3BP05452 202 aa10.78□□□□□ -0.68
LINC02048-201ENST00000440556 FBXL15Q9H469 300 aa10.78□□□□□ -0.68
LINC02048-201ENST00000440556 DKK4Q9UBT3 224 aa10.78□□□□□ -0.68
LINC02048-201ENST00000440556 LOC107984156A0A0G2JMH3 177 aa10.77□□□□□ -0.68
LINC02048-201ENST00000440556 PCNX2A6NKB5 2137 aa10.77□□□□□ -0.68
LINC02048-201ENST00000440556 H3BRN7 92 aa10.77□□□□□ -0.68
LINC02048-201ENST00000440556 CCL4P13236 92 aa10.77□□□□□ -0.68
LINC02048-201ENST00000440556 CD40P25942 277 aa10.77□□□□□ -0.68
LINC02048-201ENST00000440556 LAGE3Q14657 143 aa10.77□□□□□ -0.68
LINC02048-201ENST00000440556 PRR30Q53SZ7 412 aaPredicted RBP10.77□□□□□ -0.68
LINC02048-201ENST00000440556 ARL17AQ8IVW1 177 aa10.77□□□□□ -0.68
LINC02048-201ENST00000440556 LINC01549A6NIU2 74 aa10.77□□□□□ -0.69
LINC02048-201ENST00000440556 F8VRH5 84 aa10.77□□□□□ -0.69
LINC02048-201ENST00000440556 K7EMI3 77 aa10.77□□□□□ -0.69
LINC02048-201ENST00000440556 IGLV1-44P01699 117 aa10.77□□□□□ -0.69
LINC02048-201ENST00000440556 SCGB1C2P0DMR2 95 aa10.77□□□□□ -0.69
LINC02048-201ENST00000440556 GATA4P43694 442 aa10.77□□□□□ -0.69
LINC02048-201ENST00000440556 LINC00311Q8N616 119 aa10.77□□□□□ -0.69
LINC02048-201ENST00000440556 C8orf49Q96NF6 230 aa10.77□□□□□ -0.69
LINC02048-201ENST00000440556 RNF7Q9UBF6 113 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms