RNA–Protein interactions for RNA: ENST00000440439.5

EFEMP1-208, Transcript of EGF containing fibulin extracellular matrix protein 1, human

TSL 4

Gene EFEMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFEMP1-208	ENST00000440439	PHYHIPL	Q96FC7	376 aa		12	□□□□□ -0.49
EFEMP1-208	ENST00000440439	HYLS1	Q96M11	299 aa		12	□□□□□ -0.49
EFEMP1-208	ENST00000440439	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	ZNF705D	P0CH99	300 aa	Predicted RBP	11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	ZNF705B	P0CI00	300 aa	Predicted RBP	11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	STAG3L2	P0CL84	134 aa		11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	STAG3L3	P0CL85	134 aa		11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	CSNK1G2-AS1	Q8NCQ2	148 aa		11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	RAB24	Q969Q5	203 aa		11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	ZNF471	Q9BX82	626 aa	Predicted RBP	11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	C1QTNF4	Q9BXJ3	329 aa		11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	PRELID1	Q9Y255	219 aa		11.99	□□□□□ -0.49
EFEMP1-208	ENST00000440439	PRAC2	D3DTV9	90 aa		11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439		M0R3E3	92 aa		11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	HMGB3	O15347	200 aa	Known RBP	11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	PFDN1	O60925	122 aa		11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	ARL14EPL	P0DKL9	152 aa		11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	HIST1H1A	Q02539	215 aa	Predicted RBP	11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	EXOC3-AS1	Q8N2X6	119 aa		11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	SLC35B3	Q9H1N7	401 aa		11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	AAMDC	Q9H7C9	122 aa		11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	EDA2R	Q9HAV5	297 aa		11.98	□□□□□ -0.49
EFEMP1-208	ENST00000440439	PRB4	P10163	310 aa	Predicted RBP	11.97	□□□□□ -0.49
EFEMP1-208	ENST00000440439	ICAM4	Q14773	271 aa		11.97	□□□□□ -0.49
EFEMP1-208	ENST00000440439	ZNF726P1	Q15940	193 aa		11.97	□□□□□ -0.49
EFEMP1-208	ENST00000440439	AKR1C8P	Q5T2L2	129 aa		11.97	□□□□□ -0.49
EFEMP1-208	ENST00000440439	SSX7	Q7RTT5	188 aa		11.97	□□□□□ -0.49
EFEMP1-208	ENST00000440439	LYPD1	Q8N2G4	141 aa		11.97	□□□□□ -0.49
EFEMP1-208	ENST00000440439	STOML3	Q8TAV4	291 aa		11.97	□□□□□ -0.49
EFEMP1-208	ENST00000440439	WWC2-AS2	Q96NR7	200 aa		11.97	□□□□□ -0.49
EFEMP1-208	ENST00000440439	XCL2	Q9UBD3	114 aa		11.97	□□□□□ -0.49
EFEMP1-208	ENST00000440439	SEC11B	P0C7V7	166 aa		11.96	□□□□□ -0.49
EFEMP1-208	ENST00000440439	EIF5A	P63241	154 aa	Known RBP	11.96	□□□□□ -0.49
EFEMP1-208	ENST00000440439	CTXND1	A0A1B0GTU2	59 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	NPIPB6	E9PJ23	425 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	BOLA2-SMG1P6	H3BVE0	249 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	TPT1	P13693	172 aa	Known RBP	11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	GCHFR	P30047	84 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	FXYD7	P58549	80 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	ZFP69	Q49AA0	526 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	BAP18	Q8IXM2	172 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	C9orf62	Q8N4C0	152 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	OR10J6P	Q8NGY7	276 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	OR11H2	Q8NH07	326 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	SUN5	Q8TC36	379 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439		Q9H3A6	140 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	PLA2G2E	Q9NZK7	142 aa		11.95	□□□□□ -0.5
EFEMP1-208	ENST00000440439	CXorf1	O96002	111 aa		11.94	□□□□□ -0.5
EFEMP1-208	ENST00000440439	AMBP	P02760	352 aa		11.94	□□□□□ -0.5
EFEMP1-208	ENST00000440439	RAN	P62826	216 aa	Known RBP	11.94	□□□□□ -0.5
EFEMP1-208	ENST00000440439	RARRES2	Q99969	163 aa		11.94	□□□□□ -0.5
EFEMP1-208	ENST00000440439	UMAD1	C9J7I0	102 aa		11.93	□□□□□ -0.5
EFEMP1-208	ENST00000440439		M0R2Z0	102 aa		11.93	□□□□□ -0.5
EFEMP1-208	ENST00000440439	SPINK13	Q1W4C9	94 aa		11.93	□□□□□ -0.5
EFEMP1-208	ENST00000440439	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.93	□□□□□ -0.5
EFEMP1-208	ENST00000440439	ODF3	Q96PU9	254 aa		11.93	□□□□□ -0.5
EFEMP1-208	ENST00000440439	OTOR	Q9NRC9	128 aa		11.93	□□□□□ -0.5
EFEMP1-208	ENST00000440439		X6R8D5	127 aa		11.93	□□□□□ -0.5
EFEMP1-208	ENST00000440439	CRX	O43186	299 aa	Predicted RBP	11.92	□□□□□ -0.5
EFEMP1-208	ENST00000440439	TMED6	Q8WW62	240 aa		11.92	□□□□□ -0.5
EFEMP1-208	ENST00000440439	IGF2BP2-AS1	Q96M15	143 aa		11.92	□□□□□ -0.5
EFEMP1-208	ENST00000440439	TMEM167B	Q9NRX6	74 aa		11.92	□□□□□ -0.5
EFEMP1-208	ENST00000440439	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.91	□□□□□ -0.5
EFEMP1-208	ENST00000440439		A0A0J9YWU9	116 aa		11.91	□□□□□ -0.5
EFEMP1-208	ENST00000440439	MAP1LC3B2	A6NCE7	125 aa		11.91	□□□□□ -0.5
EFEMP1-208	ENST00000440439	IGKV2D-40	P01614	121 aa	Predicted RBP	11.91	□□□□□ -0.5
EFEMP1-208	ENST00000440439	FHIT	P49789	147 aa		11.91	□□□□□ -0.5
EFEMP1-208	ENST00000440439	C9orf47	Q6ZRZ4	202 aa		11.91	□□□□□ -0.5
EFEMP1-208	ENST00000440439		Q8NAQ8	132 aa		11.91	□□□□□ -0.5
EFEMP1-208	ENST00000440439	MAP1LC3B	Q9GZQ8	125 aa		11.91	□□□□□ -0.5
EFEMP1-208	ENST00000440439	C11orf68	Q9H3H3	251 aa	Known RBP	11.91	□□□□□ -0.5
EFEMP1-208	ENST00000440439	CT45A10	P0DMU9	189 aa		11.9	□□□□□ -0.5
EFEMP1-208	ENST00000440439	CDKN1B	P46527	198 aa		11.9	□□□□□ -0.5
EFEMP1-208	ENST00000440439	DPPA3	Q6W0C5	159 aa		11.9	□□□□□ -0.5
EFEMP1-208	ENST00000440439	SLC51B	Q86UW2	128 aa		11.9	□□□□□ -0.5
EFEMP1-208	ENST00000440439	C1orf158	Q8N1D5	194 aa		11.9	□□□□□ -0.5
EFEMP1-208	ENST00000440439	ARL6IP6	Q8N6S5	226 aa		11.9	□□□□□ -0.5
EFEMP1-208	ENST00000440439	PPP1R14D	Q9NXH3	145 aa		11.9	□□□□□ -0.5
EFEMP1-208	ENST00000440439	RBAKDN	A6NC62	111 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	PGP	A6NDG6	321 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	INS	P01308	110 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	MIF	P14174	115 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	CSN1S1	P47710	185 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	FGF8	P55075	233 aa	Predicted RBP	11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	ERCC8	Q13216	396 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	FAM74A1	Q5RGS3	127 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	FAM213B	Q8TBF2	198 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	RXFP4	Q8TDU9	374 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	FAM19A4	Q96LR4	140 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	LINC00477	Q96M19	166 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	NEU1	Q99519	415 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	AGPAT4-IT1	Q9H0P7	198 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	GOLT1B	Q9Y3E0	138 aa		11.89	□□□□□ -0.51
EFEMP1-208	ENST00000440439	TRAV12-2	A0A075B6T6	113 aa		11.88	□□□□□ -0.51
EFEMP1-208	ENST00000440439	IGHV4-28	A0A0C4DH34	117 aa		11.88	□□□□□ -0.51
EFEMP1-208	ENST00000440439	DIRC3	C9JPN6	131 aa		11.88	□□□□□ -0.51
EFEMP1-208	ENST00000440439	SLC25A5	P05141	298 aa	Known RBP	11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms