RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 IGLV2-8P01709 118 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 MYCNOSP40205 109 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 MUC21Q5SSG8 566 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 GLMPQ8WWB7 406 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 GRAMD2BQ96HH9 432 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 IGLV1-40P01703 118 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 IGHG4P01861 327 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 TCF24Q7RTU0 167 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 Q86TA4 180 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 DPF1Q92782 380 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 C8orf49Q96NF6 230 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 VGLL1Q99990 258 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 TRAPPC1Q9Y5R8 145 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 DIRC3C9JPN6 131 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 PSMB8P28062 276 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 LCN12Q6JVE5 192 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 WFDC12Q8WWY7 111 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 IL36BQ9NZH7 164 aa11.55□□□□□ -0.56
CPSF7-205ENST00000439958 V9GYV3 84 aa11.55□□□□□ -0.56
CPSF7-205ENST00000439958 PRAC2D3DTV9 90 aa11.55□□□□□ -0.56
CPSF7-205ENST00000439958 LINC00322Q6ZN03 302 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-205ENST00000439958 C8orf86Q6ZUL3 223 aa11.55□□□□□ -0.56
CPSF7-205ENST00000439958 CLEC5AQ9NY25 188 aa11.55□□□□□ -0.56
CPSF7-205ENST00000439958 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.55□□□□□ -0.56
CPSF7-205ENST00000439958 MRPS12O15235 138 aaKnown RBP11.55□□□□□ -0.56
CPSF7-205ENST00000439958 GCGP01275 180 aa11.55□□□□□ -0.56
CPSF7-205ENST00000439958 TRGC1P0CF51 173 aa11.55□□□□□ -0.56
CPSF7-205ENST00000439958 ESM1Q9NQ30 184 aa11.55□□□□□ -0.56
CPSF7-205ENST00000439958 NDUFA4O00483 81 aa11.54□□□□□ -0.56
CPSF7-205ENST00000439958 KIAA1644Q3SXP7 199 aa11.54□□□□□ -0.56
CPSF7-205ENST00000439958 DAZ1Q9NQZ3 744 aaKnown RBP11.54□□□□□ -0.56
CPSF7-205ENST00000439958 H3BUA1 57 aa11.54□□□□□ -0.56
CPSF7-205ENST00000439958 CD5LO43866 347 aa11.54□□□□□ -0.56
CPSF7-205ENST00000439958 CRIP2P52943 208 aaPredicted RBP11.54□□□□□ -0.56
CPSF7-205ENST00000439958 ZNF331Q9NQX6 463 aaPredicted RBP11.54□□□□□ -0.56
CPSF7-205ENST00000439958 TRBV24-1A0A075B6N3 115 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 SNURFLB1AK76 121 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 CD99P14209 185 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 PSG3Q16557 428 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 C9orf139Q6ZV77 190 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 KLHL30-AS1Q8NEE0 82 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 PGLYRP4Q96LB8 373 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 ATRQ13535 2644 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 IGHV4OR15-8A0A075B7B6 117 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 A0A087WW49 117 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 IGKV3-20P01619 116 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 TEX29Q8N6K0 151 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 NAT8BQ9UHF3 227 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 A0A1W2PS18 150 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 PDE6HQ13956 83 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 ZC2HC1AQ96GY0 325 aa11.53□□□□□ -0.56
CPSF7-205ENST00000439958 HIGD1CA8MV81 97 aa11.52□□□□□ -0.56
CPSF7-205ENST00000439958 SLURP1P55000 103 aa11.52□□□□□ -0.56
CPSF7-205ENST00000439958 ZNF418Q8TF45 676 aaPredicted RBP11.52□□□□□ -0.56
CPSF7-205ENST00000439958 BTF3L4Q96K17 158 aa11.52□□□□□ -0.56
CPSF7-205ENST00000439958 OSTCQ9NRP0 149 aa11.52□□□□□ -0.56
CPSF7-205ENST00000439958 HIST1H2BKO60814 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST1H2BJP06899 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST1H2BOP23527 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST1H2BBP33778 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST1H2BDP58876 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST1H2BCP62807 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST2H2BEQ16778 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-205ENST00000439958 TMEM190Q8WZ59 177 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST1H2BHQ93079 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST1H2BNQ99877 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 HIST1H2BMQ99879 126 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 F6UB75 175 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 CD33P20138 364 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 Q6ZSV7 163 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 NEU1Q99519 415 aa11.52□□□□□ -0.57
CPSF7-205ENST00000439958 LY6G6DO95868 133 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 HOXD3P31249 432 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-205ENST00000439958 LYPD1Q8N2G4 141 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 OR11H1Q8NG94 326 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 NDFIP1Q9BT67 221 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 SRD5A3Q9H8P0 318 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 NAGKQ9UJ70 344 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 TIMM8BQ9Y5J9 83 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-205ENST00000439958 LY96Q9Y6Y9 160 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 GRIFINA4D1Z8 144 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 LTAP01374 205 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 ORM1P02763 201 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 CFHR3Q02985 330 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 KRTAP1-1Q07627 177 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 HIST1H1AQ02539 215 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-205ENST00000439958 FAM209BQ5JX69 171 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 GFI1BQ5VTD9 330 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 BAHCC1Q9P281 2608 aa11.51□□□□□ -0.57
CPSF7-205ENST00000439958 NSD1Q96L73 2696 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-205ENST00000439958 TMEM78Q5T7P6 136 aa11.5□□□□□ -0.57
CPSF7-205ENST00000439958 TMEM75Q8N9X5 138 aa11.5□□□□□ -0.57
CPSF7-205ENST00000439958 TCEAL7Q9BRU2 100 aa11.5□□□□□ -0.57
CPSF7-205ENST00000439958 RPP21Q9H633 154 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms