RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 OR10J4P0C629 311 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 ZNF705DP0CH99 300 aaPredicted RBP8.58□□□□□ -1.04
HSPG2-206ENST00000439717 ZNF705BP0CI00 300 aaPredicted RBP8.58□□□□□ -1.04
HSPG2-206ENST00000439717 FXYD7P58549 80 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 FAM122CQ6P4D5 195 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 ZNF705AQ6ZN79 300 aaPredicted RBP8.58□□□□□ -1.04
HSPG2-206ENST00000439717 PQLC2Q6ZP29 291 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 TCTE3Q8IZS6 198 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 LYPD1Q8N2G4 141 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 OR11H4Q8NGC9 324 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 ZNF503Q96F45 646 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 ST6GAL2Q96JF0 529 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 ARPC5LQ9BPX5 153 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 CYTL1Q9NRR1 136 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 PPP1R14DQ9NXH3 145 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 PRAC2D3DTV9 90 aa8.57□□□□□ -1.04
HSPG2-206ENST00000439717 BOLA2-SMG1P6H3BVE0 249 aa8.57□□□□□ -1.04
HSPG2-206ENST00000439717 CDC34P49427 236 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-206ENST00000439717 UBE2L3P68036 154 aaKnown RBP8.57□□□□□ -1.04
HSPG2-206ENST00000439717 EXOC3-AS1Q8N2X6 119 aa8.57□□□□□ -1.04
HSPG2-206ENST00000439717 RPP25LQ8N5L8 163 aaKnown RBP8.57□□□□□ -1.04
HSPG2-206ENST00000439717 Q8NAQ8 132 aa8.57□□□□□ -1.04
HSPG2-206ENST00000439717 IGF2BP2-AS1Q96M15 143 aa8.57□□□□□ -1.04
HSPG2-206ENST00000439717 NEU1Q99519 415 aa8.57□□□□□ -1.04
HSPG2-206ENST00000439717 SH3BGRL3Q9H299 93 aa8.57□□□□□ -1.04
HSPG2-206ENST00000439717 GOLT1BQ9Y3E0 138 aa8.57□□□□□ -1.04
HSPG2-206ENST00000439717 X6R8D5 127 aa8.57□□□□□ -1.04
HSPG2-206ENST00000439717 SMIM9A6NGZ8 99 aa8.56□□□□□ -1.04
HSPG2-206ENST00000439717 STAG3L2P0CL84 134 aa8.56□□□□□ -1.04
HSPG2-206ENST00000439717 STAG3L3P0CL85 134 aa8.56□□□□□ -1.04
HSPG2-206ENST00000439717 ICAM4Q14773 271 aa8.56□□□□□ -1.04
HSPG2-206ENST00000439717 SPINK13Q1W4C9 94 aa8.56□□□□□ -1.04
HSPG2-206ENST00000439717 PHYHIPLQ96FC7 376 aa8.56□□□□□ -1.04
HSPG2-206ENST00000439717 ODF3Q96PU9 254 aa8.56□□□□□ -1.04
HSPG2-206ENST00000439717 ACTR3CQ9C0K3 210 aaPredicted RBP8.56□□□□□ -1.04
HSPG2-206ENST00000439717 IGHV4-28A0A0C4DH34 117 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 KANTRA0A1W2PQU2 76 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 NPIPB6E9PJ23 425 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 M0R3E3 92 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 INSP01308 110 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 TSPOP30536 169 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 CDKN1BP46527 198 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 CSN1S1P47710 185 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 RANP62826 216 aaKnown RBP8.55□□□□□ -1.04
HSPG2-206ENST00000439717 CASC10Q5T4H9 136 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 RAB24Q969Q5 203 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 LINC00477Q96M19 166 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 Q9H3A6 140 aa8.55□□□□□ -1.04
HSPG2-206ENST00000439717 M0R2Z0 102 aa8.54□□□□□ -1.04
HSPG2-206ENST00000439717 HMGB3O15347 200 aaKnown RBP8.54□□□□□ -1.04
HSPG2-206ENST00000439717 CRXO43186 299 aaPredicted RBP8.54□□□□□ -1.04
HSPG2-206ENST00000439717 BCL2L11O43521 198 aa8.54□□□□□ -1.04
HSPG2-206ENST00000439717 EIF3GO75821 320 aaKnown RBP eCLIP8.54□□□□□ -1.04
HSPG2-206ENST00000439717 RBMY1A1P0DJD3 496 aaKnown RBP8.54□□□□□ -1.04
HSPG2-206ENST00000439717 RBMY1CP0DJD4 496 aa8.54□□□□□ -1.04
HSPG2-206ENST00000439717 ARL14EPLP0DKL9 152 aa8.54□□□□□ -1.04
HSPG2-206ENST00000439717 EIF5AP63241 154 aaKnown RBP8.54□□□□□ -1.04
HSPG2-206ENST00000439717 RBMY1FQ15415 496 aaKnown RBP8.54□□□□□ -1.04
HSPG2-206ENST00000439717 FAM74A1Q5RGS3 127 aa8.54□□□□□ -1.04
HSPG2-206ENST00000439717 AKR1C8PQ5T2L2 129 aa8.54□□□□□ -1.04
HSPG2-206ENST00000439717 C1orf158Q8N1D5 194 aa8.54□□□□□ -1.04
HSPG2-206ENST00000439717 SUN5Q8TC36 379 aa8.54□□□□□ -1.04
HSPG2-206ENST00000439717 RXFP4Q8TDU9 374 aa8.54□□□□□ -1.04
HSPG2-206ENST00000439717 IGHV3OR16-12A0A075B7B8 117 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 TMEM189A5PLL7 270 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 CXorf1O96002 111 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 C1QBP02746 253 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 CT45A10P0DMU9 189 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 PRB4P10163 310 aaPredicted RBP8.53□□□□□ -1.04
HSPG2-206ENST00000439717 LEPP41159 167 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 C9orf47Q6ZRZ4 202 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 TMUB2Q71RG4 321 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 AKAP14Q86UN6 197 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 BAP18Q8IXM2 172 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 TMEM256Q8N2U0 113 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 ARL6IP6Q8N6S5 226 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 C11orf45Q8TAV5 145 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 C20orf144Q9BQM9 153 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 TMEM208Q9BTX3 173 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 OTORQ9NRC9 128 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 TMEM167BQ9NRX6 74 aa8.53□□□□□ -1.04
HSPG2-206ENST00000439717 hCG_2014768A0A024R1R8 64 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 TRAV12-2A0A075B6T6 113 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 CTXND1A0A1B0GTU2 59 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 RBAKDNA6NC62 111 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 DEFB4AO15263 64 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 PFDN1O60925 122 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 HBE1P02100 147 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 SLC25A5P05141 298 aaKnown RBP8.52□□□□□ -1.05
HSPG2-206ENST00000439717 SEC11BP0C7V7 166 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 GCHFRP30047 84 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 ERCC8Q13216 396 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 ZFAND6Q6FIF0 208 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 HYLS1Q96M11 299 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 ZNF471Q9BX82 626 aaPredicted RBP8.52□□□□□ -1.05
HSPG2-206ENST00000439717 AGPAT4-IT1Q9H0P7 198 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 CSMD3Q7Z407 3707 aa8.52□□□□□ -1.05
HSPG2-206ENST00000439717 IGKV2-40A0A087WW87 121 aaPredicted RBP8.51□□□□□ -1.05
HSPG2-206ENST00000439717 TRBV7-9A0A0J9YWB2 115 aa8.51□□□□□ -1.05
HSPG2-206ENST00000439717 PGPA6NDG6 321 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms