RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 LEPP41159 167 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 MRPL51Q4U2R6 128 aaKnown RBP9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 ARPC1AQ92747 370 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 CLUHP3Q96NS8 147 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 FOXC2Q99958 501 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 PLSCR4Q9NRQ2 329 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 LINC00312Q9Y6C7 94 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 IGHV3-49A0A0A0MS15 119 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 K7EQM0 130 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 M0R296 226 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 FCN3O75636 299 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 SEM1Q6ZVN7 128 aa9.83□□□□□ -0.84
SLC38A1-202ENST00000439706 TGFAP01135 160 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 HSD52Q0P140 79 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 OTORQ9NRC9 128 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 ANKHD1Q8IWZ3 2542 aaKnown RBP9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 IGLV2-23P01705 113 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 HBDP02042 147 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 ATP5G2Q06055 141 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 NGBQ9NPG2 151 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 SPG11Q96JI7 2443 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 NDUFS7O75251 213 aa9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 SOX21Q9Y651 276 aaPredicted RBP9.82□□□□□ -0.84
SLC38A1-202ENST00000439706 BOD1L2Q8IYS8 172 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 PRSS33Q8NF86 280 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 NDUFA3O95167 84 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 ZC2HC1BQ5TFG8 222 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 THAP8Q8NA92 274 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 TRAV26-2A0A0B4J265 109 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 SPAARA0A1B0GVQ0 90 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 LGALS7P47929 136 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 INSL3P51460 131 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 ZNF492Q9P255 531 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 UFC1Q9Y3C8 167 aa9.81□□□□□ -0.84
SLC38A1-202ENST00000439706 SH2D1AO60880 128 aa9.8□□□□□ -0.84
SLC38A1-202ENST00000439706 DYNLRB1Q9NP97 96 aa9.8□□□□□ -0.84
SLC38A1-202ENST00000439706 TRAV40A0A0B4J280 105 aa9.8□□□□□ -0.84
SLC38A1-202ENST00000439706 NPIPB6E9PJ23 425 aa9.8□□□□□ -0.84
SLC38A1-202ENST00000439706 CD40P25942 277 aa9.8□□□□□ -0.84
SLC38A1-202ENST00000439706 PPP1R27Q86WC6 154 aa9.8□□□□□ -0.84
SLC38A1-202ENST00000439706 GFRA4Q9GZZ7 299 aa9.8□□□□□ -0.84
SLC38A1-202ENST00000439706 AAMDCQ9H7C9 122 aa9.8□□□□□ -0.84
SLC38A1-202ENST00000439706 CELSR1Q9NYQ6 3014 aa9.8□□□□□ -0.84
SLC38A1-202ENST00000439706 CT83Q5H943 113 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 FAM104BQ5XKR9 115 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 TRGV9Q99603 122 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 TRBV19A0A075B6N1 114 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 TRAV17A0A0B4J275 112 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 IGKV1-17P01599 117 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 CHAC1Q9BUX1 264 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 SCNM1Q9BWG6 230 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 CTSZQ9UBR2 303 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 TM4SF5O14894 197 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 CIDEAO60543 219 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 LY6HO94772 140 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 EGR2P11161 476 aaPredicted RBP9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 APOBEC3AP31941 199 aaPredicted RBP9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 RBPJQ06330 500 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 ERCC8Q13216 396 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 C1orf162Q8NEQ5 155 aaPredicted RBP9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 ABHD17AQ96GS6 310 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 SIGMAR1Q99720 223 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 COL25A1Q9BXS0 654 aaPredicted RBP9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 SIGLEC9Q9Y336 463 aa9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 RAI1Q7Z5J4 1906 aaPredicted RBP9.79□□□□□ -0.84
SLC38A1-202ENST00000439706 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.78□□□□□ -0.845e-7■■■■■ 38.5
SLC38A1-202ENST00000439706 RPEQ96AT9 228 aa9.78□□□□□ -0.84
SLC38A1-202ENST00000439706 VGLL1Q99990 258 aa9.78□□□□□ -0.84
SLC38A1-202ENST00000439706 HIST1H4GQ99525 98 aa9.78□□□□□ -0.84
SLC38A1-202ENST00000439706 CD59P13987 128 aa9.78□□□□□ -0.84
SLC38A1-202ENST00000439706 RNF125Q96EQ8 232 aa9.78□□□□□ -0.84
SLC38A1-202ENST00000439706 TMEM8BA6NDV4 472 aa9.77□□□□□ -0.85
SLC38A1-202ENST00000439706 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.85
SLC38A1-202ENST00000439706 RPS20P60866 119 aaKnown RBP9.77□□□□□ -0.85
SLC38A1-202ENST00000439706 TMEM158Q8WZ71 300 aa9.77□□□□□ -0.85
SLC38A1-202ENST00000439706 NCBP2LA6PVI3 153 aaKnown RBP9.77□□□□□ -0.85
SLC38A1-202ENST00000439706 SCGB2A2Q13296 93 aa9.77□□□□□ -0.85
SLC38A1-202ENST00000439706 SIGLEC15Q6ZMC9 328 aa9.77□□□□□ -0.85
SLC38A1-202ENST00000439706 TRBV25-1A0A075B6N4 114 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 EFNA4P52798 201 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 BSPH1Q075Z2 132 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 NEGR1Q7Z3B1 354 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 OR4X2Q8NGF9 303 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 ONECUT1Q9UBC0 465 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 SORL1Q92673 2214 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 IGHG3P01860 377 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 LGALS9BQ3B8N2 356 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 LGALS9CQ6DKI2 356 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 RNF182Q8N6D2 247 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 OR9G4Q8NGQ1 327 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 OTOGLQ3ZCN5 2332 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 GAGE12HA6NDE8 117 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 C17orf100A8MU93 164 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 IGHV1-8P0DP01 117 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 ZNF479Q96JC4 524 aa9.76□□□□□ -0.85
SLC38A1-202ENST00000439706 A0A1B0GWB2 263 aa9.75□□□□□ -0.85
SLC38A1-202ENST00000439706 CDX4O14627 284 aaPredicted RBP9.75□□□□□ -0.85
SLC38A1-202ENST00000439706 Q6ZQT7 251 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms