RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 LINC00052Q96N35 136 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 MANBALQ9NQG1 85 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 C19orf73Q9NVV2 129 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 LINC00862A6NCI5 91 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 CD7P09564 240 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 ID1P41134 155 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 DEFB1P60022 68 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 CD81P60033 236 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 EGFEM1PQ0D2K5 195 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 ODF3L2Q3SX64 289 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 ZNF506Q5JVG8 444 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 CST9LP1Q5W188 147 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 GPR61Q9BZJ8 451 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 MED9Q9NWA0 146 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 VAX2Q9UIW0 290 aa5.57□□□□□ -1.52
UBR3-205ENST00000439681 C9JQL5 133 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 C11orf94C9JXX5 98 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 IFNA1P01562 189 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 GNG5P63218 68 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 PSMG4Q5JS54 123 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 RXFP4Q8TDU9 374 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 MRPL53Q96EL3 112 aaKnown RBP5.56□□□□□ -1.52
UBR3-205ENST00000439681 NKX6-2Q9C056 277 aaPredicted RBP5.56□□□□□ -1.52
UBR3-205ENST00000439681 AAMDCQ9H7C9 122 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 MAP6D1Q9H9H5 199 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 CLEC5AQ9NY25 188 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 EPDR1Q9UM22 224 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 PRELID1Q9Y255 219 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 NOTCH3Q9UM47 2321 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 SLC25A5P05141 298 aaKnown RBP5.56□□□□□ -1.52
UBR3-205ENST00000439681 DEFB131AP59861 70 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 SNRPD3P62318 126 aaKnown RBP5.56□□□□□ -1.52
UBR3-205ENST00000439681 MEF2BQ02080 365 aaPredicted RBP5.56□□□□□ -1.52
UBR3-205ENST00000439681 ZNF124Q15973 351 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 TOR2AQ5JU69 321 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 Q8N1Y9 231 aa5.56□□□□□ -1.52
UBR3-205ENST00000439681 RPUSD4Q96CM3 377 aaKnown RBP5.56□□□□□ -1.52
UBR3-205ENST00000439681 DIRC3C9JPN6 131 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 F6UB75 175 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 TAGLN2P37802 199 aaKnown RBP5.55□□□□□ -1.52
UBR3-205ENST00000439681 APRG1Q8IVJ8 170 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 C5orf17Q8NAS9 161 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 ZNF738Q8NE65 137 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 FAM110AQ9BQ89 295 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 TXNDC17Q9BRA2 123 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 EIF5A2Q9GZV4 153 aaKnown RBP5.55□□□□□ -1.52
UBR3-205ENST00000439681 DNAH3Q8TD57 4116 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 RAB19A4D1S5 217 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 TCRAP04437 139 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 ZNF705DP0CH99 300 aaPredicted RBP5.55□□□□□ -1.52
UBR3-205ENST00000439681 ZNF705BP0CI00 300 aaPredicted RBP5.55□□□□□ -1.52
UBR3-205ENST00000439681 CMC4P56277 68 aaPredicted RBP5.55□□□□□ -1.52
UBR3-205ENST00000439681 CTAG1AP78358 180 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 GDF5OSQ5U4N7 250 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 CFAP161Q6P656 301 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 CMTM2Q8TAZ6 248 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 C11orf52Q96A22 123 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 LINC00479Q96M42 142 aa5.55□□□□□ -1.52
UBR3-205ENST00000439681 IGKV2-40A0A087WW87 121 aaPredicted RBP5.54□□□□□ -1.52
UBR3-205ENST00000439681 A0A0J9YX75 114 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 SCO2A0A1W2PP80 73 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 KNCNA6PVL3 124 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 OR11H12B2RN74 326 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 PEX7O00628 323 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 PDE6DO43924 150 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 IGKV2D-40P01614 121 aaPredicted RBP5.54□□□□□ -1.52
UBR3-205ENST00000439681 IGLV2-11P01706 119 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 SRP19P09132 144 aaKnown RBP5.54□□□□□ -1.52
UBR3-205ENST00000439681 CSN1S1P47710 185 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 ERCC8Q13216 396 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 PEA15Q15121 130 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 KPRPQ5T749 579 aaPredicted RBP5.54□□□□□ -1.52
UBR3-205ENST00000439681 GOLT1AQ6ZVE7 132 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 COMMD7Q86VX2 200 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 OR8A1Q8NGG7 326 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 C2CD4CQ8TF44 421 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 HIST1H2BAQ96A08 127 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 PRR25Q96S07 402 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 VGLL1Q99990 258 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 TCEAL7Q9BRU2 100 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 ATG101Q9BSB4 218 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 WFDC10AQ9H1F0 79 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 SAV1Q9H4B6 383 aaPredicted RBP5.54□□□□□ -1.52
UBR3-205ENST00000439681 RPH3ALQ9UNE2 315 aa5.54□□□□□ -1.52
UBR3-205ENST00000439681 NDUFS6O75380 124 aaKnown RBP5.53□□□□□ -1.52
UBR3-205ENST00000439681 FOXI2Q6ZQN5 318 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 EIF4E3Q8N5X7 224 aaKnown RBP5.53□□□□□ -1.52
UBR3-205ENST00000439681 DEFB125Q8N687 156 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 AGPAT4-IT1Q9H0P7 198 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 KLF12Q9Y4X4 402 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 TRAV8-1A0A0A6YYK1 113 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 TRAV34A0A0B4J273 112 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 RBAKDNA6NC62 111 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 NPIPB6E9PJ23 425 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 F6UZH7 168 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 H3BMM0 161 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 SMUG1Q53HV7 270 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 ACTL10Q5JWF8 245 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
UBR3-205ENST00000439681 GTSCR1Q86UQ5 136 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms