RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
ACTN1-204ENST00000438964 RPL27AP46776 148 aaKnown RBP10.56□□□□□ -0.72
ACTN1-204ENST00000438964 C16orf54Q6UWD8 224 aa10.56□□□□□ -0.72
ACTN1-204ENST00000438964 LEPP41159 167 aa10.56□□□□□ -0.72
ACTN1-204ENST00000438964 ZNF474Q6S9Z5 364 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-204ENST00000438964 FOXC2Q99958 501 aa10.56□□□□□ -0.72
ACTN1-204ENST00000438964 RASL11BQ9BPW5 248 aa10.56□□□□□ -0.72
ACTN1-204ENST00000438964 COL12A1Q99715 3063 aa10.56□□□□□ -0.72
ACTN1-204ENST00000438964 CT45A10P0DMU9 189 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 PLGLAQ15195 96 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 LGALS9BQ3B8N2 356 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 LGALS9CQ6DKI2 356 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 CCDC144NLQ6NUI1 221 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 FER1L6-AS2Q96M78 137 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 NCOR1P1Q9H4R4 102 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 TMEM189A5PLL7 270 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 IL4P05112 153 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 RAB9AP51151 201 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 VMA21Q3ZAQ7 101 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 ZC2HC1BQ5TFG8 222 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 FAM104BQ5XKR9 115 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 OR5A1Q8NGJ0 315 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 DKK4Q9UBT3 224 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 WI2-2373I1.2A0A1W2PRP0 233 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 SEM1Q6ZVN7 128 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 MAPKAPK5-AS1Q8N8E1 139 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 OR9G4Q8NGQ1 327 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 VGLL1Q99990 258 aa10.55□□□□□ -0.72
ACTN1-204ENST00000438964 TRBV25-1A0A075B6N4 114 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 SPRY2O43597 315 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 SH2D1AO60880 128 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 COX7A1P24310 79 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 OR4X2Q8NGF9 303 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 SPAG8Q99932 426 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-204ENST00000438964 SH3BGRL2Q9UJC5 107 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 TRGV9Q99603 122 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 KLK15Q9H2R5 256 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 NGBQ9NPG2 151 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 LINC00312Q9Y6C7 94 aa10.54□□□□□ -0.72
ACTN1-204ENST00000438964 TRBV19A0A075B6N1 114 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 TRAV40A0A0B4J280 105 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 TGFAP01135 160 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 ZNF80P51504 273 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-204ENST00000438964 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 RAB9BQ9NP90 201 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 PRRG2O14669 202 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 IGKV1-17P01599 117 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 GLRXP35754 106 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 SIGLEC15Q6ZMC9 328 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 BSNQ9UPA5 3926 aa10.53□□□□□ -0.72
ACTN1-204ENST00000438964 ORM1P02763 201 aa10.52□□□□□ -0.72
ACTN1-204ENST00000438964 EGR2P11161 476 aaPredicted RBP10.52□□□□□ -0.72
ACTN1-204ENST00000438964 C20orf78Q9BR46 151 aa10.52□□□□□ -0.72
ACTN1-204ENST00000438964 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 PRR33A8MZF0 331 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 NDUFA3O95167 84 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 CNIH1O95406 144 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 ATP5IP56385 69 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-204ENST00000438964 ZNF562Q6V9R5 426 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 PLSCR4Q9NRQ2 329 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 IGHV3OR16-13A0A075B7E8 117 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 IGHV3-74A0A0B4J1X5 117 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 TMEM8BA6NDV4 472 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 ZNF479Q96JC4 524 aa10.52□□□□□ -0.73
ACTN1-204ENST00000438964 COL25A1Q9BXS0 654 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-204ENST00000438964 SPANXB1Q9NS25 103 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-204ENST00000438964 LYNX1G3V0Z9 82 aa10.51□□□□□ -0.73
ACTN1-204ENST00000438964 CRYGCP07315 174 aa10.51□□□□□ -0.73
ACTN1-204ENST00000438964 LYNX1P0DP58 116 aa10.51□□□□□ -0.73
ACTN1-204ENST00000438964 CTSZQ9UBR2 303 aa10.51□□□□□ -0.73
ACTN1-204ENST00000438964 HHLA3Q9XRX5 114 aa10.51□□□□□ -0.73
ACTN1-204ENST00000438964 CKS1BP61024 79 aa10.51□□□□□ -0.73
ACTN1-204ENST00000438964 TMEM158Q8WZ71 300 aa10.51□□□□□ -0.73
ACTN1-204ENST00000438964 FTH1P19P0C7X4 201 aa10.5□□□□□ -0.73
ACTN1-204ENST00000438964 ODF1Q14990 250 aa10.5□□□□□ -0.73
ACTN1-204ENST00000438964 CD300EQ496F6 205 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-204ENST00000438964 EFNA4P52798 201 aa10.5□□□□□ -0.73
ACTN1-204ENST00000438964 Q6ZQT7 251 aa10.5□□□□□ -0.73
ACTN1-204ENST00000438964 ATP6V0BQ99437 205 aa10.5□□□□□ -0.73
ACTN1-204ENST00000438964 IGHV3-66A0A0C4DH42 116 aa10.5□□□□□ -0.73
ACTN1-204ENST00000438964 LINC01548A6NM66 108 aa10.5□□□□□ -0.73
ACTN1-204ENST00000438964 IGLL5B9A064 214 aa10.5□□□□□ -0.73
ACTN1-204ENST00000438964 K7EQM0 130 aa10.5□□□□□ -0.73
ACTN1-204ENST00000438964 C1orf162Q8NEQ5 155 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-204ENST00000438964 PHLDA1Q8WV24 401 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-204ENST00000438964 MRPL35Q9NZE8 188 aaKnown RBP10.5□□□□□ -0.73
ACTN1-204ENST00000438964 TM4SF5O14894 197 aa10.49□□□□□ -0.73
ACTN1-204ENST00000438964 ERCC8Q13216 396 aa10.49□□□□□ -0.73
ACTN1-204ENST00000438964 GLMPQ8WWB7 406 aa10.49□□□□□ -0.73
ACTN1-204ENST00000438964 PTH2Q96A98 100 aa10.49□□□□□ -0.73
ACTN1-204ENST00000438964 SIGLEC9Q9Y336 463 aa10.49□□□□□ -0.73
ACTN1-204ENST00000438964 A0A1B0GWB2 263 aa10.49□□□□□ -0.73
ACTN1-204ENST00000438964 HIST1H4GQ99525 98 aa10.49□□□□□ -0.73
ACTN1-204ENST00000438964 IGKCP01834 107 aa10.48□□□□□ -0.73
ACTN1-204ENST00000438964 PAX8Q06710 450 aa10.48□□□□□ -0.73
ACTN1-204ENST00000438964 PPP1R27Q86WC6 154 aa10.48□□□□□ -0.73
ACTN1-204ENST00000438964 CEND1Q8N111 149 aa10.48□□□□□ -0.73
ACTN1-204ENST00000438964 SCNM1Q9BWG6 230 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms