RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZNF329Q86UD4 541 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 TMEM160Q9NX00 188 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 ATP6V0E1O15342 81 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 IGKV3-20P01619 116 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 C1orf122Q6ZSJ8 110 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 DTX2Q86UW9 622 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 LINC01356Q8N9X3 169 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 OSTCQ9NRP0 149 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 G3V318 75 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 PF4P02776 101 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 FABP2P12104 132 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 PKD1L2Q7Z442 2459 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 GPX1P07203 203 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 RPP21Q9H633 154 aaKnown RBP9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 TRBV20OR9-2A0A075B6H5 130 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 IGHV4-39P01824 125 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 BRWD1-AS2P59051 145 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 IGLC7A0M8Q6 106 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 NDUFB8O95169 186 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 MAJINQ3KP22 176 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 Q71RC1 249 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 OR11H6Q8NGC7 330 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 CDC42EP3Q9UKI2 254 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 PSG8Q9UQ74 426 aa9.22□□□□□ -0.93
TRAPPC9-202ENST00000438773 TRBV9A0A0B4J1U6 114 aa9.21□□□□□ -0.93
TRAPPC9-202ENST00000438773 IGHV4-61A0A0C4DH41 118 aa9.21□□□□□ -0.93
TRAPPC9-202ENST00000438773 IGLV1-47P01700 117 aa9.21□□□□□ -0.93
TRAPPC9-202ENST00000438773 OR10AG1Q8NH19 301 aa9.21□□□□□ -0.93
TRAPPC9-202ENST00000438773 RPS20P60866 119 aaKnown RBP9.21□□□□□ -0.94
TRAPPC9-202ENST00000438773 RITA1Q96K30 269 aa9.21□□□□□ -0.94
TRAPPC9-202ENST00000438773 Q6ZWC4 215 aa9.21□□□□□ -0.94
TRAPPC9-202ENST00000438773 HIST1H4GQ99525 98 aa9.21□□□□□ -0.94
TRAPPC9-202ENST00000438773 SNRPD3P62318 126 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 CIARTQ8N365 385 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 C9JCJ5 164 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 TCRAP04437 139 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 MYOZ3Q8TDC0 251 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 NRGNQ92686 78 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 TRAV9-2A0A087WT02 112 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 M0R3E3 92 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 GATA3P23771 443 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 PRR20EP86478 221 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 PRR20CP86479 221 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 PRR20DP86480 221 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 PRR20BP86481 221 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 PRR20AP86496 221 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 SLC50A1Q9BRV3 221 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 TP53TG3Q9ULZ0 132 aa9.2□□□□□ -0.94
TRAPPC9-202ENST00000438773 A0A1B0GUT8 65 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 TOMM40O96008 361 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 NUDT10Q8NFP7 164 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 OR4X2Q8NGF9 303 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 NUDT11Q96G61 164 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 BEX4Q9NWD9 120 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 HOXB4P17483 251 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 VWC2Q2TAL6 325 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 C11orf44Q8N8P7 122 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 KIR2DL5BA0A0G2JN68 375 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 KIR2DL5BA0A0G2JPC4 375 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 IZUMO1RA6ND01 250 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 C19orf84I3L1E1 186 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 KIR2DL5AQ8N109 375 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 ZNF414Q96IQ9 312 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 TNRC6BQ9UPQ9 1833 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 SPENQ96T58 3664 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 IGHV4-30-2A0A087WSY4 118 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 ZFP36P26651 326 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 LINC00310P59036 64 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 NDPQ00604 133 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 FOXL1Q12952 345 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 FAM120AOSQ5T036 256 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 SPOCK3Q9BQ16 436 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 RNF114Q9Y508 228 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 PHLDA3Q9Y5J5 127 aa9.19□□□□□ -0.94
TRAPPC9-202ENST00000438773 TRAV9-1A0A075B6T8 112 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 TRBV7-1A0A0A6YYK4 115 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 C3orf56Q8N813 242 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 TANC2Q9HCD6 1990 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 NCR2O95944 276 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 IGLC1P0CG04 106 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 CACNG7P62955 275 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 CDSNQ15517 529 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 FAM110DQ8TAY7 271 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 SPCS1Q9Y6A9 102 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 PRSS2P07478 247 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 P0C879 139 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 SSBP2P81877 361 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 Q8N7P7 452 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 SHANK2-AS3Q9BTD1 123 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 LINC00574Q9H8X3 128 aa9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 PEF1Q9UBV8 284 aaKnown RBP9.18□□□□□ -0.94
TRAPPC9-202ENST00000438773 IGKV2-40A0A087WW87 121 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 A0A1W2PRX2 142 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 IGKV2D-40P01614 121 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 C1orf229Q6ZS94 237 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 GLMPQ8WWB7 406 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 CFAP47Q6ZTR5 3102 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 HCFC1P51610 2035 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms