RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 EMP1P54849 157 aa17.76■□□□□ 0.43
RAPGEF1-206ENST00000438647 FCN2Q15485 313 aa17.76■□□□□ 0.43
RAPGEF1-206ENST00000438647 ASB13Q8WXK3 278 aa17.76■□□□□ 0.43
RAPGEF1-206ENST00000438647 MRPL53Q96EL3 112 aaKnown RBP17.76■□□□□ 0.43
RAPGEF1-206ENST00000438647 TIMM9Q9Y5J7 89 aa17.76■□□□□ 0.43
RAPGEF1-206ENST00000438647 LOC102723971A0A1B0GUV8 181 aa17.75■□□□□ 0.43
RAPGEF1-206ENST00000438647 LY6G6CO95867 125 aa17.75■□□□□ 0.43
RAPGEF1-206ENST00000438647 CDKN1BP46527 198 aa17.75■□□□□ 0.43
RAPGEF1-206ENST00000438647 RGS21Q2M5E4 152 aa17.75■□□□□ 0.43
RAPGEF1-206ENST00000438647 BAP18Q8IXM2 172 aa17.75■□□□□ 0.43
RAPGEF1-206ENST00000438647 SLC25A2Q9BXI2 301 aa17.75■□□□□ 0.43
RAPGEF1-206ENST00000438647 PARD6GQ9BYG4 376 aaPredicted RBP17.75■□□□□ 0.43
RAPGEF1-206ENST00000438647 PYYP10082 97 aa17.74■□□□□ 0.43
RAPGEF1-206ENST00000438647 C12orf74Q32Q52 190 aa17.74■□□□□ 0.43
RAPGEF1-206ENST00000438647 MIR17HGQ75NE6 70 aa17.74■□□□□ 0.43
RAPGEF1-206ENST00000438647 TMEM256Q8N2U0 113 aa17.74■□□□□ 0.43
RAPGEF1-206ENST00000438647 FUT9Q9Y231 359 aa17.74■□□□□ 0.43
RAPGEF1-206ENST00000438647 PRELID1Q9Y255 219 aa17.74■□□□□ 0.43
RAPGEF1-206ENST00000438647 TRAV12-2A0A075B6T6 113 aa17.73■□□□□ 0.43
RAPGEF1-206ENST00000438647 PRAC2D3DTV9 90 aa17.73■□□□□ 0.43
RAPGEF1-206ENST00000438647 TSPOP30536 169 aa17.73■□□□□ 0.43
RAPGEF1-206ENST00000438647 FFAR4Q5NUL3 377 aa17.73■□□□□ 0.43
RAPGEF1-206ENST00000438647 FAM167A-AS1Q96KT0 104 aa17.73■□□□□ 0.43
RAPGEF1-206ENST00000438647 AAMDCQ9H7C9 122 aa17.73■□□□□ 0.43
RAPGEF1-206ENST00000438647 IGLL5B9A064 214 aa17.72■□□□□ 0.43
RAPGEF1-206ENST00000438647 GIPP09681 153 aaPredicted RBP17.72■□□□□ 0.43
RAPGEF1-206ENST00000438647 PRB4P10163 310 aaPredicted RBP17.72■□□□□ 0.43
RAPGEF1-206ENST00000438647 BLNKQ8WV28 456 aa17.72■□□□□ 0.43
RAPGEF1-206ENST00000438647 OR51M1Q9H341 326 aa17.72■□□□□ 0.43
RAPGEF1-206ENST00000438647 DKK2Q9UBU2 259 aa17.72■□□□□ 0.43
RAPGEF1-206ENST00000438647 NDUFB4O95168 129 aa17.71■□□□□ 0.43
RAPGEF1-206ENST00000438647 RPP25LQ8N5L8 163 aaKnown RBP17.71■□□□□ 0.43
RAPGEF1-206ENST00000438647 PAXXQ9BUH6 204 aa17.71■□□□□ 0.43
RAPGEF1-206ENST00000438647 DEFB131BA0A096LNP1 70 aa17.7■□□□□ 0.42
RAPGEF1-206ENST00000438647 NBEAP1P0C6P0 100 aa17.7■□□□□ 0.42
RAPGEF1-206ENST00000438647 FAM222AQ5U5X8 452 aa17.7■□□□□ 0.42
RAPGEF1-206ENST00000438647 ZNF767PQ75MW2 155 aa17.7■□□□□ 0.42
RAPGEF1-206ENST00000438647 ODF3Q96PU9 254 aa17.7■□□□□ 0.42
RAPGEF1-206ENST00000438647 LINC01587Q99440 93 aa17.7■□□□□ 0.42
RAPGEF1-206ENST00000438647 C20orf144Q9BQM9 153 aa17.7■□□□□ 0.42
RAPGEF1-206ENST00000438647 YTHDF2Q9Y5A9 579 aaKnown RBP17.7■□□□□ 0.42
RAPGEF1-206ENST00000438647 OR7C2O60412 319 aa17.69■□□□□ 0.42
RAPGEF1-206ENST00000438647 TAS2R45P59539 299 aa17.69■□□□□ 0.42
RAPGEF1-206ENST00000438647 ZNF266Q14584 549 aa17.69■□□□□ 0.42
RAPGEF1-206ENST00000438647 LGALS9CQ6DKI2 356 aa17.69■□□□□ 0.42
RAPGEF1-206ENST00000438647 AQP10Q96PS8 301 aa17.69■□□□□ 0.42
RAPGEF1-206ENST00000438647 NIPSNAP3BQ9BS92 247 aa17.69■□□□□ 0.42
RAPGEF1-206ENST00000438647 WFDC1Q9HC57 220 aa17.69■□□□□ 0.42
RAPGEF1-206ENST00000438647 ZNF705GA8MUZ8 300 aaPredicted RBP17.68■□□□□ 0.42
RAPGEF1-206ENST00000438647 NPIPB6E9PJ23 425 aa17.68■□□□□ 0.42
RAPGEF1-206ENST00000438647 M0R3E3 92 aa17.68■□□□□ 0.42
RAPGEF1-206ENST00000438647 TAS2R60P59551 318 aa17.68■□□□□ 0.42
RAPGEF1-206ENST00000438647 RNF141Q8WVD5 230 aa17.68■□□□□ 0.42
RAPGEF1-206ENST00000438647 LEPP41159 167 aa17.67■□□□□ 0.42
RAPGEF1-206ENST00000438647 KHDC3LQ587J8 217 aa17.67■□□□□ 0.42
RAPGEF1-206ENST00000438647 EXOC3-AS1Q8N2X6 119 aa17.67■□□□□ 0.42
RAPGEF1-206ENST00000438647 FXYD5Q96DB9 178 aa17.67■□□□□ 0.42
RAPGEF1-206ENST00000438647 H7BYZ3 331 aa17.66■□□□□ 0.42
RAPGEF1-206ENST00000438647 OR10J4P0C629 311 aa17.66■□□□□ 0.42
RAPGEF1-206ENST00000438647 ICAM4Q14773 271 aa17.66■□□□□ 0.42
RAPGEF1-206ENST00000438647 OXA1LQ15070 435 aa17.66■□□□□ 0.42
RAPGEF1-206ENST00000438647 ACOT6Q3I5F7 207 aaPredicted RBP17.66■□□□□ 0.42
RAPGEF1-206ENST00000438647 IGHV4-4A0A075B6R2 117 aa17.65■□□□□ 0.42
RAPGEF1-206ENST00000438647 CT45A10P0DMU9 189 aa17.65■□□□□ 0.42
RAPGEF1-206ENST00000438647 M6PRP20645 277 aa17.65■□□□□ 0.42
RAPGEF1-206ENST00000438647 INO80EQ8NBZ0 244 aaPredicted RBP17.65■□□□□ 0.42
RAPGEF1-206ENST00000438647 LINC00477Q96M19 166 aa17.65■□□□□ 0.42
RAPGEF1-206ENST00000438647 APLNQ9ULZ1 77 aa17.65■□□□□ 0.42
RAPGEF1-206ENST00000438647 LYRM9A8MSI8 78 aa17.64■□□□□ 0.41
RAPGEF1-206ENST00000438647 UBE2L3P68036 154 aaKnown RBP17.64■□□□□ 0.41
RAPGEF1-206ENST00000438647 GFI1BQ5VTD9 330 aa17.64■□□□□ 0.41
RAPGEF1-206ENST00000438647 C16orf74Q96GX8 76 aa17.64■□□□□ 0.41
RAPGEF1-206ENST00000438647 A0A1W2PPV4 95 aa17.63■□□□□ 0.41
RAPGEF1-206ENST00000438647 HTN1P15515 57 aa17.63■□□□□ 0.41
RAPGEF1-206ENST00000438647 DAD1P61803 113 aa17.63■□□□□ 0.41
RAPGEF1-206ENST00000438647 FAM122CQ6P4D5 195 aa17.63■□□□□ 0.41
RAPGEF1-206ENST00000438647 ZNF493Q6ZR52 646 aa17.63■□□□□ 0.41
RAPGEF1-206ENST00000438647 LYPD1Q8N2G4 141 aa17.63■□□□□ 0.41
RAPGEF1-206ENST00000438647 PRM2P04554 102 aa17.62■□□□□ 0.41
RAPGEF1-206ENST00000438647 KIR3DS1Q14943 382 aa17.62■□□□□ 0.41
RAPGEF1-206ENST00000438647 Q5BKY6 102 aa17.62■□□□□ 0.41
RAPGEF1-206ENST00000438647 OR2T35Q8NGX2 323 aa17.62■□□□□ 0.41
RAPGEF1-206ENST00000438647 PHYHIPLQ96FC7 376 aa17.62■□□□□ 0.41
RAPGEF1-206ENST00000438647 KMT2AQ03164 3969 aa17.61■□□□□ 0.41
RAPGEF1-206ENST00000438647 AZU1P20160 251 aa17.61■□□□□ 0.41
RAPGEF1-206ENST00000438647 CSN1S1P47710 185 aa17.61■□□□□ 0.41
RAPGEF1-206ENST00000438647 TMEM78Q5T7P6 136 aa17.61■□□□□ 0.41
RAPGEF1-206ENST00000438647 C9orf47Q6ZRZ4 202 aa17.61■□□□□ 0.41
RAPGEF1-206ENST00000438647 TMEM263Q8WUH6 116 aaKnown RBP17.61■□□□□ 0.41
RAPGEF1-206ENST00000438647 ZNF503Q96F45 646 aa17.61■□□□□ 0.41
RAPGEF1-206ENST00000438647 FAM210BQ96KR6 192 aa17.61■□□□□ 0.41
RAPGEF1-206ENST00000438647 NDUFAF3Q9BU61 184 aa17.61■□□□□ 0.41
RAPGEF1-206ENST00000438647 FXYD6-FXYD2A0A087WZ82 144 aa17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 J3KRW8 73 aa17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 SLC25A5P05141 298 aaKnown RBP17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 RANP62826 216 aaKnown RBP17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 ERCC8Q13216 396 aa17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 PQLC2Q6ZP29 291 aa17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 CCDC28AQ8IWP9 274 aa17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 HSD17B11Q8NBQ5 300 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms