RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 NDFIP1Q9BT67 221 aa13.14□□□□□ -0.31
TTC3-209ENST00000438055 SH2D1AO60880 128 aa13.14□□□□□ -0.31
TTC3-209ENST00000438055 NHLH1Q02575 133 aa13.14□□□□□ -0.31
TTC3-209ENST00000438055 KLRB1Q12918 225 aa13.14□□□□□ -0.31
TTC3-209ENST00000438055 CFHR4Q92496 578 aa13.14□□□□□ -0.31
TTC3-209ENST00000438055 IGHV3OR16-10A0A075B7F0 116 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 MPV17L2Q567V2 206 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 FAM120AOSQ5T036 256 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 WFDC3Q8IUB2 231 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 OR10AG1Q8NH19 301 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 IFI27P40305 119 aaPredicted RBP13.13□□□□□ -0.31
TTC3-209ENST00000438055 PSG9Q00887 426 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 LYPD1Q8N2G4 141 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 PRELID3AQ96N28 172 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 SMKR1H3BMG3 65 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 M0R1W7 72 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 PPIFP30405 207 aaKnown RBP13.13□□□□□ -0.31
TTC3-209ENST00000438055 CKS2P33552 79 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 CRIP1P50238 77 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 ADORA2A-AS1P86434 159 aa13.13□□□□□ -0.31
TTC3-209ENST00000438055 NEU4Q8WWR8 484 aaPredicted RBP13.13□□□□□ -0.31
TTC3-209ENST00000438055 FAM106CPP0CH98 169 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 LY6G5BQ8NDX9 201 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 ZNF738Q8NE65 137 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 IGLV11-55A0A075B6I3 123 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 CBY3A6NI87 242 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 NPIPB6E9PJ23 425 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 NCR2O95944 276 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 CREBBPQ92793 2442 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 C15orf32Q32M92 178 aa13.12□□□□□ -0.31
TTC3-209ENST00000438055 CLEC3BP05452 202 aa13.11□□□□□ -0.31
TTC3-209ENST00000438055 VGLL1Q99990 258 aa13.11□□□□□ -0.31
TTC3-209ENST00000438055 MRPS16Q9Y3D3 137 aaKnown RBP13.11□□□□□ -0.31
TTC3-209ENST00000438055 ZFP36P26651 326 aaKnown RBP13.11□□□□□ -0.31
TTC3-209ENST00000438055 NPBQ8NG41 125 aa13.11□□□□□ -0.31
TTC3-209ENST00000438055 NDUFA3O95167 84 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 RHOGP84095 191 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 SAPCD1Q5SSQ6 148 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 CLEC19AQ6UXS0 136 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 ST20Q9HBF5 79 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 LINC00527Q9UJ94 153 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 WI2-2373I1.2A0A1W2PRP0 233 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 J3KRW8 73 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 PAX2Q02962 417 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 Q6AWC8 147 aa13.1□□□□□ -0.31
TTC3-209ENST00000438055 ERCC8Q13216 396 aa13.09□□□□□ -0.31
TTC3-209ENST00000438055 PET117Q6UWS5 81 aa13.09□□□□□ -0.31
TTC3-209ENST00000438055 ORMDL3Q8N138 153 aa13.09□□□□□ -0.31
TTC3-209ENST00000438055 FER1L6-AS1Q8NA97 138 aa13.09□□□□□ -0.31
TTC3-209ENST00000438055 FAM106AQ4KMX7 169 aa13.09□□□□□ -0.31
TTC3-209ENST00000438055 RNF182Q8N6D2 247 aa13.09□□□□□ -0.31
TTC3-209ENST00000438055 PDE6HQ13956 83 aa13.09□□□□□ -0.31
TTC3-209ENST00000438055 LY6DQ14210 128 aa13.09□□□□□ -0.31
TTC3-209ENST00000438055 G3V318 75 aa13.08□□□□□ -0.31
TTC3-209ENST00000438055 C18orf15Q96N68 181 aa13.08□□□□□ -0.31
TTC3-209ENST00000438055 A0A087X0K7 114 aa13.08□□□□□ -0.32
TTC3-209ENST00000438055 CTSGP08311 255 aa13.08□□□□□ -0.32
TTC3-209ENST00000438055 BMI1P35226 326 aa13.08□□□□□ -0.32
TTC3-209ENST00000438055 PRR25Q96S07 402 aa13.08□□□□□ -0.32
TTC3-209ENST00000438055 GOSR1O95249 250 aa13.08□□□□□ -0.32
TTC3-209ENST00000438055 OR4C5Q8NGB2 326 aa13.08□□□□□ -0.32
TTC3-209ENST00000438055 CSMD1Q96PZ7 3565 aa13.08□□□□□ -0.32
TTC3-209ENST00000438055 MAP1AP78559 2803 aaPredicted RBP13.07□□□□□ -0.32
TTC3-209ENST00000438055 EGR2P11161 476 aaPredicted RBP13.07□□□□□ -0.32
TTC3-209ENST00000438055 LOXL1Q08397 574 aaPredicted RBP13.07□□□□□ -0.32
TTC3-209ENST00000438055 CSPG4Q6UVK1 2322 aa13.07□□□□□ -0.32
TTC3-209ENST00000438055 IGHV7-81A0A0B4J1V7 117 aa13.07□□□□□ -0.32
TTC3-209ENST00000438055 A0A1B0GW15 77 aa13.07□□□□□ -0.32
TTC3-209ENST00000438055 GAGE1Q13065 139 aa13.07□□□□□ -0.32
TTC3-209ENST00000438055 FBXL19-AS1Q494R0 122 aa13.07□□□□□ -0.32
TTC3-209ENST00000438055 TTC9CQ8N5M4 171 aa13.07□□□□□ -0.32
TTC3-209ENST00000438055 ASH1LQ9NR48 2969 aaKnown RBP13.07□□□□□ -0.32
TTC3-209ENST00000438055 TMEM219Q86XT9 240 aa13.07□□□□□ -0.32
TTC3-209ENST00000438055 ODF3BA8MYP8 253 aa13.06□□□□□ -0.32
TTC3-209ENST00000438055 ATP6V0E1O15342 81 aa13.06□□□□□ -0.32
TTC3-209ENST00000438055 HOXB4P17483 251 aaPredicted RBP13.06□□□□□ -0.32
TTC3-209ENST00000438055 S100A7P31151 101 aa13.06□□□□□ -0.32
TTC3-209ENST00000438055 UCNP55089 124 aa13.06□□□□□ -0.32
TTC3-209ENST00000438055 SAA4P35542 130 aa13.06□□□□□ -0.32
TTC3-209ENST00000438055 MSRB2Q9Y3D2 182 aa13.06□□□□□ -0.32
TTC3-209ENST00000438055 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
TTC3-209ENST00000438055 SIGLEC8Q9NYZ4 499 aa13.06□□□□□ -0.32
TTC3-209ENST00000438055 DCHS2Q6V1P9 2916 aa13.05□□□□□ -0.32
TTC3-209ENST00000438055 UQCRFS1P47985 274 aa13.05□□□□□ -0.32
TTC3-209ENST00000438055 CACNG7P62955 275 aa13.05□□□□□ -0.32
TTC3-209ENST00000438055 MSRB1Q9NZV6 116 aa13.05□□□□□ -0.32
TTC3-209ENST00000438055 MRPS12O15235 138 aaKnown RBP13.05□□□□□ -0.32
TTC3-209ENST00000438055 RPL11P62913 178 aaKnown RBP13.05□□□□□ -0.32
TTC3-209ENST00000438055 ZNF747Q9BV97 191 aa13.05□□□□□ -0.32
TTC3-209ENST00000438055 BPESC1Q9GZL8 116 aa13.05□□□□□ -0.32
TTC3-209ENST00000438055 UFC1Q9Y3C8 167 aa13.05□□□□□ -0.32
TTC3-209ENST00000438055 COX11Q9Y6N1 276 aa13.05□□□□□ -0.32
TTC3-209ENST00000438055 IGKV3-7A0A075B6H7 116 aa13.05□□□□□ -0.32
TTC3-209ENST00000438055 MRPL51Q4U2R6 128 aaKnown RBP13.05□□□□□ -0.32
TTC3-209ENST00000438055 EVI2AP22794 236 aa13.04□□□□□ -0.32
TTC3-209ENST00000438055 ZNF80P51504 273 aaPredicted RBP13.04□□□□□ -0.32
TTC3-209ENST00000438055 MINOS1Q5TGZ0 78 aa13.04□□□□□ -0.32
TTC3-209ENST00000438055 MINOS1-NBL1R4GNA1 71 aa13.04□□□□□ -0.32
TTC3-209ENST00000438055 F8W735 103 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms