RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 ZNF705AQ6ZN79 300 aaPredicted RBP8.3□□□□□ -1.08
COL28A1-203ENST00000435823 Q8NAQ8 132 aa8.3□□□□□ -1.08
COL28A1-203ENST00000435823 OR10J6PQ8NGY7 276 aa8.3□□□□□ -1.08
COL28A1-203ENST00000435823 C11orf45Q8TAV5 145 aa8.3□□□□□ -1.08
COL28A1-203ENST00000435823 BLNKQ8WV28 456 aa8.3□□□□□ -1.08
COL28A1-203ENST00000435823 MRPL53Q96EL3 112 aaKnown RBP8.3□□□□□ -1.08
COL28A1-203ENST00000435823 PAXXQ9BUH6 204 aa8.3□□□□□ -1.08
COL28A1-203ENST00000435823 AAMDCQ9H7C9 122 aa8.3□□□□□ -1.08
COL28A1-203ENST00000435823 TNFSF18Q9UNG2 199 aa8.3□□□□□ -1.08
COL28A1-203ENST00000435823 PRELID1Q9Y255 219 aa8.3□□□□□ -1.08
COL28A1-203ENST00000435823 BORCS7-ASMTA0A0B4J1R7 106 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 A0A1W2PPV4 95 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 NUPR2A6NF83 97 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 SMIM9A6NGZ8 99 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 OR7C2O60412 319 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 INSP01308 110 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 M6PRP20645 277 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 SPINK13Q1W4C9 94 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 KHDC3LQ587J8 217 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 HSD17B11Q8NBQ5 300 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 FAM167A-AS1Q96KT0 104 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 IGF2BP2-AS1Q96M15 143 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 NEU1Q99519 415 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 TMEM208Q9BTX3 173 aa8.29□□□□□ -1.08
COL28A1-203ENST00000435823 RNF222A6NCQ9 220 aa8.28□□□□□ -1.08
COL28A1-203ENST00000435823 M0R2Z0 102 aa8.28□□□□□ -1.08
COL28A1-203ENST00000435823 NDUFB4O95168 129 aa8.28□□□□□ -1.08
COL28A1-203ENST00000435823 HBE1P02100 147 aa8.28□□□□□ -1.08
COL28A1-203ENST00000435823 NBEAP1P0C6P0 100 aa8.28□□□□□ -1.08
COL28A1-203ENST00000435823 RBMY1A1P0DJD3 496 aaKnown RBP8.28□□□□□ -1.08
COL28A1-203ENST00000435823 RBMY1CP0DJD4 496 aa8.28□□□□□ -1.08
COL28A1-203ENST00000435823 UBE2L3P68036 154 aaKnown RBP8.28□□□□□ -1.08
COL28A1-203ENST00000435823 RBMY1FQ15415 496 aaKnown RBP8.28□□□□□ -1.08
COL28A1-203ENST00000435823 RNF141Q8WVD5 230 aa8.28□□□□□ -1.08
COL28A1-203ENST00000435823 PSMG3Q9BT73 122 aaPredicted RBP8.28□□□□□ -1.08
COL28A1-203ENST00000435823 TMEM189A5PLL7 270 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 PRAC2D3DTV9 90 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 ARPC5O15511 151 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 MBP02144 154 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 OR10J4P0C629 311 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 PRB4P10163 310 aaPredicted RBP8.27□□□□□ -1.09
COL28A1-203ENST00000435823 ATP6V0CP27449 155 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 TSPOP30536 169 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 CDKN1BP46527 198 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 NANOS2P60321 138 aaKnown RBP8.27□□□□□ -1.09
COL28A1-203ENST00000435823 RAB2AP61019 212 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 FAM122CQ6P4D5 195 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 C1orf158Q8N1D5 194 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 OR10G4Q8NGN3 311 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 OR10G9Q8NGN4 311 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 OR10G7Q8NGN6 311 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 OR2G3Q8NGZ4 309 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 FXYD5Q96DB9 178 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 KLK5Q9Y337 293 aaPredicted RBP8.27□□□□□ -1.09
COL28A1-203ENST00000435823 RFNGQ9Y644 331 aa8.27□□□□□ -1.09
COL28A1-203ENST00000435823 TRAV12-2A0A075B6T6 113 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 NPIPB6E9PJ23 425 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 G3V3Q6 166 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 SMLR1H3BR10 107 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 M0R3E3 92 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 TAAR5O14804 337 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 SERF2P84101 59 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 ICAM4Q14773 271 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 RRN3P1Q2M238 152 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 RPL7L1Q6DKI1 246 aaKnown RBP8.26□□□□□ -1.09
COL28A1-203ENST00000435823 CEMP1Q6PRD7 247 aaPredicted RBP8.26□□□□□ -1.09
COL28A1-203ENST00000435823 BAP18Q8IXM2 172 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 TMEM256Q8N2U0 113 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 EXOC3-AS1Q8N2X6 119 aa8.26□□□□□ -1.09
COL28A1-203ENST00000435823 PHLDA1Q8WV24 401 aaPredicted RBP8.26□□□□□ -1.09
COL28A1-203ENST00000435823 GNPNAT1Q96EK6 184 aaPredicted RBP8.26□□□□□ -1.09
COL28A1-203ENST00000435823 CRXO43186 299 aaPredicted RBP8.25□□□□□ -1.09
COL28A1-203ENST00000435823 JTBO76095 146 aa8.25□□□□□ -1.09
COL28A1-203ENST00000435823 LEPP41159 167 aa8.25□□□□□ -1.09
COL28A1-203ENST00000435823 CSN1S1P47710 185 aa8.25□□□□□ -1.09
COL28A1-203ENST00000435823 CDC34P49427 236 aaPredicted RBP8.25□□□□□ -1.09
COL28A1-203ENST00000435823 PQLC2Q6ZP29 291 aa8.25□□□□□ -1.09
COL28A1-203ENST00000435823 LYPD1Q8N2G4 141 aa8.25□□□□□ -1.09
COL28A1-203ENST00000435823 RPP25LQ8N5L8 163 aaKnown RBP8.25□□□□□ -1.09
COL28A1-203ENST00000435823 ZNF503Q96F45 646 aa8.25□□□□□ -1.09
COL28A1-203ENST00000435823 PHYHIPLQ96FC7 376 aa8.25□□□□□ -1.09
COL28A1-203ENST00000435823 ODF3Q96PU9 254 aa8.25□□□□□ -1.09
COL28A1-203ENST00000435823 TEX48A0A1B0GUV7 120 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 LOC102723971A0A1B0GUV8 181 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 C11orf94C9JXX5 98 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 SPART-AS1P0CW21 52 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 EMP1P54849 157 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 RANP62826 216 aaKnown RBP8.24□□□□□ -1.09
COL28A1-203ENST00000435823 LINC00477Q96M19 166 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 LINC01587Q99440 93 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 C20orf144Q9BQM9 153 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 SH3BGRL3Q9H299 93 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 Q9H3A6 140 aa8.24□□□□□ -1.09
COL28A1-203ENST00000435823 TENM2Q9NT68 2774 aa8.23□□□□□ -1.09
COL28A1-203ENST00000435823 HMGB3O15347 200 aaKnown RBP8.23□□□□□ -1.09
COL28A1-203ENST00000435823 EIF3GO75821 320 aaKnown RBP eCLIP8.23□□□□□ -1.09
COL28A1-203ENST00000435823 CT45A10P0DMU9 189 aa8.23□□□□□ -1.09
COL28A1-203ENST00000435823 ZNF345Q14585 488 aa8.23□□□□□ -1.09
COL28A1-203ENST00000435823 FAM74A1Q5RGS3 127 aa8.23□□□□□ -1.09
COL28A1-203ENST00000435823 TMEM78Q5T7P6 136 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms