RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SEM1Q6ZVN7 128 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 PLEKHB2Q96CS7 222 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 TMEM14CQ9P0S9 112 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE12BA1L429 117 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE7O76087 117 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 IGKCP01834 107 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 C11orf53Q8IXP5 236 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 TMEM170AQ8WVE7 144 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 C1orf159Q96HA4 380 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 C11orf68Q9H3H3 251 aaKnown RBP12.42□□□□□ -0.42
NEDD4-202ENST00000435532 ALPK2Q86TB3 2170 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 CLPSL1A2RUU4 121 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 PFN1P07737 140 aaKnown RBP12.42□□□□□ -0.42
NEDD4-202ENST00000435532 CFHR3Q02985 330 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 NPBQ8NG41 125 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 C6orf226Q5I0X4 101 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 PGPEP1LA6NFU8 196 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 GP9P14770 177 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 MYCNOSP40205 109 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 TPSG1Q9NRR2 321 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 TRBV19A0A075B6N1 114 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 A0A087WWL8 130 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 SLC25A2Q9BXI2 301 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 LAMTOR2Q9Y2Q5 125 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 PAX9P55771 341 aa12.41□□□□□ -0.42
NEDD4-202ENST00000435532 PHLDA1Q8WV24 401 aaPredicted RBP12.41□□□□□ -0.42
NEDD4-202ENST00000435532 D6R8Y8 96 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 ARMS2P0C7Q2 107 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 ZNF134P52741 427 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 DIAPH2-AS1Q14236 149 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 POU2AF1Q16633 256 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 KRTAP27-1Q3LI81 207 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 GFRA4Q9GZZ7 299 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 KLK9Q9UKQ9 250 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE12JA6NER3 117 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE1Q13065 139 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE4Q13068 117 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE5Q13069 117 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE13Q4V321 117 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 TMEM256Q8N2U0 113 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 LIME1Q9H400 295 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 C1orf147Q96MC9 270 aaPredicted RBP12.4□□□□□ -0.42
NEDD4-202ENST00000435532 SPAG8Q99932 426 aaPredicted RBP12.4□□□□□ -0.42
NEDD4-202ENST00000435532 JPT2Q9H910 190 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 LYL1P12980 280 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 CST9LQ9H4G1 147 aa12.4□□□□□ -0.42
NEDD4-202ENST00000435532 ZNF561-AS1K7EIQ3 104 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 IFITM2Q01629 132 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 CYTL1Q9NRR1 136 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 DIDO1Q9BTC0 2240 aaKnown RBP12.39□□□□□ -0.43
NEDD4-202ENST00000435532 IFI27L1Q96BM0 104 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 A8MXK9 166 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 SRSF4Q08170 494 aaKnown RBP12.39□□□□□ -0.43
NEDD4-202ENST00000435532 PRSS57Q6UWY2 283 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 TMEM242Q9NWH2 141 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 FAM19A2Q8N3H0 131 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 TECTAO75443 2155 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 ZNF815PA8K554 130 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 NCR2O95944 276 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 WT1-ASQ06250 92 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 THAP8Q8NA92 274 aa12.39□□□□□ -0.43
NEDD4-202ENST00000435532 TMEM89A2RUT3 159 aa12.38□□□□□ -0.43
NEDD4-202ENST00000435532 VWC2Q2TAL6 325 aa12.38□□□□□ -0.43
NEDD4-202ENST00000435532 NIT1Q86X76 327 aa12.38□□□□□ -0.43
NEDD4-202ENST00000435532 ZNF318Q5VUA4 2279 aa12.38□□□□□ -0.43
NEDD4-202ENST00000435532 PKIGQ9Y2B9 76 aa12.38□□□□□ -0.43
NEDD4-202ENST00000435532 LOC102724200A0A096LPH7 203 aaPredicted RBP12.38□□□□□ -0.43
NEDD4-202ENST00000435532 ZNF492Q9P255 531 aa12.38□□□□□ -0.43
NEDD4-202ENST00000435532 TRAV8-1A0A0A6YYK1 113 aa12.37□□□□□ -0.43
NEDD4-202ENST00000435532 SSBP2P81877 361 aaPredicted RBP12.37□□□□□ -0.43
NEDD4-202ENST00000435532 SERF1AO75920 110 aa12.37□□□□□ -0.43
NEDD4-202ENST00000435532 Q8NFD4 153 aa12.37□□□□□ -0.43
NEDD4-202ENST00000435532 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
NEDD4-202ENST00000435532 TMEM238C9JI98 176 aa12.36□□□□□ -0.43
NEDD4-202ENST00000435532 CGB3P0DN86 165 aa12.36□□□□□ -0.43
NEDD4-202ENST00000435532 SRSF2Q01130 221 aaKnown RBP12.36□□□□□ -0.43
NEDD4-202ENST00000435532 LINC01551Q86U37 167 aa12.36□□□□□ -0.43
NEDD4-202ENST00000435532 TRAV2A0A0B4J234 112 aa12.36□□□□□ -0.43
NEDD4-202ENST00000435532 PAX4O43316 350 aa12.36□□□□□ -0.43
NEDD4-202ENST00000435532 CD5LO43866 347 aa12.36□□□□□ -0.43
NEDD4-202ENST00000435532 MED12Q93074 2177 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 SPRNQ5BIV9 151 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 NUP35Q8NFH5 326 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 TRAV13-1A0A0B4J241 112 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 IGLC1P0CG04 106 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 MUC6Q6W4X9 2439 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 LY6G5BQ8NDX9 201 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 OR2K2Q8NGT1 345 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 TMEM243Q9BU79 118 aa12.35□□□□□ -0.43
NEDD4-202ENST00000435532 F8WEM9 126 aa12.34□□□□□ -0.43
NEDD4-202ENST00000435532 MRPL53Q96EL3 112 aaKnown RBP12.34□□□□□ -0.43
NEDD4-202ENST00000435532 SLURP1P55000 103 aa12.34□□□□□ -0.43
NEDD4-202ENST00000435532 TMEM95Q3KNT9 176 aa12.34□□□□□ -0.43
NEDD4-202ENST00000435532 SNRNP200O75643 2136 aaKnown RBP12.34□□□□□ -0.43
NEDD4-202ENST00000435532 I3L3M4 83 aa12.34□□□□□ -0.43
NEDD4-202ENST00000435532 DEFB136Q30KP8 78 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms