RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 TSPOP30536 169 aa15.72■□□□□ 0.11
SEMA3B-205ENST00000434030 CDKN1BP46527 198 aa15.72■□□□□ 0.11
SEMA3B-205ENST00000434030 H2BFSP57053 126 aa15.72■□□□□ 0.11
SEMA3B-205ENST00000434030 DEFA1P59665 94 aa15.72■□□□□ 0.11
SEMA3B-205ENST00000434030 DEFA3P59666 94 aa15.72■□□□□ 0.11
SEMA3B-205ENST00000434030 TMEM256Q8N2U0 113 aa15.72■□□□□ 0.11
SEMA3B-205ENST00000434030 LINC01587Q99440 93 aa15.72■□□□□ 0.11
SEMA3B-205ENST00000434030 DNAH10Q8IVF4 4471 aa15.71■□□□□ 0.11
SEMA3B-205ENST00000434030 DAD1P61803 113 aa15.71■□□□□ 0.11
SEMA3B-205ENST00000434030 OR10J6PQ8NGY7 276 aa15.71■□□□□ 0.11
SEMA3B-205ENST00000434030 THAP6Q8TBB0 222 aa15.71■□□□□ 0.11
SEMA3B-205ENST00000434030 FAM210BQ96KR6 192 aa15.71■□□□□ 0.11
SEMA3B-205ENST00000434030 BATF3Q9NR55 127 aa15.71■□□□□ 0.11
SEMA3B-205ENST00000434030 HTN3P15516 51 aa15.7■□□□□ 0.1
SEMA3B-205ENST00000434030 GCSAMLQ5JQS6 135 aa15.7■□□□□ 0.1
SEMA3B-205ENST00000434030 PLAC8L1A1L4L8 177 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 LYRM9A8MSI8 78 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 ZNF253O75346 499 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 P0DMU3 169 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 FAM231AP0DMU4 169 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 FAM231CP0DMU5 169 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 TAS2R60P59551 318 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 KIR3DS1Q14943 382 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 PPP1R1CQ8WVI7 109 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 PARD6GQ9BYG4 376 aaPredicted RBP15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 TMEM14CQ9P0S9 112 aa15.69■□□□□ 0.1
SEMA3B-205ENST00000434030 TRBV19A0A075B6N1 114 aa15.68■□□□□ 0.1
SEMA3B-205ENST00000434030 HTN1P15515 57 aa15.68■□□□□ 0.1
SEMA3B-205ENST00000434030 CLINT1Q14677 625 aa15.68■□□□□ 0.1
SEMA3B-205ENST00000434030 POM121L12Q8N7R1 296 aa15.68■□□□□ 0.1
SEMA3B-205ENST00000434030 SSNA1O43805 119 aa15.67■□□□□ 0.1
SEMA3B-205ENST00000434030 PYYP10082 97 aa15.67■□□□□ 0.1
SEMA3B-205ENST00000434030 HIST1H1EP10412 219 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-205ENST00000434030 FCN2Q15485 313 aa15.67■□□□□ 0.1
SEMA3B-205ENST00000434030 C20orf144Q9BQM9 153 aa15.67■□□□□ 0.1
SEMA3B-205ENST00000434030 WDR61Q9GZS3 305 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-205ENST00000434030 NDUFB4O95168 129 aa15.66■□□□□ 0.1
SEMA3B-205ENST00000434030 MPC2O95563 127 aa15.66■□□□□ 0.1
SEMA3B-205ENST00000434030 MRPL53Q96EL3 112 aaKnown RBP15.66■□□□□ 0.1
SEMA3B-205ENST00000434030 NACAE9PAV3 2078 aa15.65■□□□□ 0.1
SEMA3B-205ENST00000434030 NPIPB6E9PJ23 425 aa15.65■□□□□ 0.1
SEMA3B-205ENST00000434030 H7BYZ3 331 aa15.65■□□□□ 0.1
SEMA3B-205ENST00000434030 CT45A10P0DMU9 189 aa15.65■□□□□ 0.1
SEMA3B-205ENST00000434030 DEFB130BP0DP73 79 aa15.65■□□□□ 0.1
SEMA3B-205ENST00000434030 DEFB130AP0DP74 79 aa15.65■□□□□ 0.1
SEMA3B-205ENST00000434030 C16orf74Q96GX8 76 aa15.65■□□□□ 0.1
SEMA3B-205ENST00000434030 SLC25A2Q9BXI2 301 aa15.65■□□□□ 0.1
SEMA3B-205ENST00000434030 M0R3E3 92 aa15.64■□□□□ 0.09
SEMA3B-205ENST00000434030 PDE6HQ13956 83 aa15.64■□□□□ 0.09
SEMA3B-205ENST00000434030 GFI1BQ5VTD9 330 aa15.64■□□□□ 0.09
SEMA3B-205ENST00000434030 TMEM88Q6PEY1 159 aa15.64■□□□□ 0.09
SEMA3B-205ENST00000434030 MIR17HGQ75NE6 70 aa15.64■□□□□ 0.09
SEMA3B-205ENST00000434030 BLNKQ8WV28 456 aa15.64■□□□□ 0.09
SEMA3B-205ENST00000434030 FAM167A-AS1Q96KT0 104 aa15.64■□□□□ 0.09
SEMA3B-205ENST00000434030 ODF3Q96PU9 254 aa15.64■□□□□ 0.09
SEMA3B-205ENST00000434030 TIMM9Q9Y5J7 89 aa15.64■□□□□ 0.09
SEMA3B-205ENST00000434030 ZNF493Q6ZR52 646 aa15.63■□□□□ 0.09
SEMA3B-205ENST00000434030 RNASE8Q8TDE3 154 aaKnown RBP15.63■□□□□ 0.09
SEMA3B-205ENST00000434030 PRELID1Q9Y255 219 aa15.63■□□□□ 0.09
SEMA3B-205ENST00000434030 HSPB11Q9Y547 144 aa15.63■□□□□ 0.09
SEMA3B-205ENST00000434030 TIMM8BQ9Y5J9 83 aaPredicted RBP15.63■□□□□ 0.09
SEMA3B-205ENST00000434030 J3KRW8 73 aa15.62■□□□□ 0.09
SEMA3B-205ENST00000434030 PET100P0DJ07 73 aa15.62■□□□□ 0.09
SEMA3B-205ENST00000434030 EXOC3-AS1Q8N2X6 119 aa15.62■□□□□ 0.09
SEMA3B-205ENST00000434030 TMEM263Q8WUH6 116 aaKnown RBP15.62■□□□□ 0.09
SEMA3B-205ENST00000434030 ATP5SQ99766 215 aa15.62■□□□□ 0.09
SEMA3B-205ENST00000434030 KCNIP2Q9NS61 270 aa15.62■□□□□ 0.09
SEMA3B-205ENST00000434030 C17orf112F2Z3M2 114 aa15.61■□□□□ 0.09
SEMA3B-205ENST00000434030 LEPP41159 167 aa15.61■□□□□ 0.09
SEMA3B-205ENST00000434030 ERCC8Q13216 396 aa15.61■□□□□ 0.09
SEMA3B-205ENST00000434030 OR51M1Q9H341 326 aa15.61■□□□□ 0.09
SEMA3B-205ENST00000434030 NBEAP1P0C6P0 100 aa15.6■□□□□ 0.09
SEMA3B-205ENST00000434030 RPL12P30050 165 aaKnown RBP15.6■□□□□ 0.09
SEMA3B-205ENST00000434030 MRPL32Q9BYC8 188 aaKnown RBP15.6■□□□□ 0.09
SEMA3B-205ENST00000434030 AAMDCQ9H7C9 122 aa15.6■□□□□ 0.09
SEMA3B-205ENST00000434030 NOP10Q9NPE3 64 aaKnown RBP15.6■□□□□ 0.09
SEMA3B-205ENST00000434030 TRAV12-3A0A0B4J271 114 aa15.59■□□□□ 0.09
SEMA3B-205ENST00000434030 CBY3A6NI87 242 aa15.59■□□□□ 0.09
SEMA3B-205ENST00000434030 ICAM4Q14773 271 aa15.59■□□□□ 0.09
SEMA3B-205ENST00000434030 UBE2DNLQ8IWF7 75 aa15.59■□□□□ 0.09
SEMA3B-205ENST00000434030 LINC00477Q96M19 166 aa15.59■□□□□ 0.09
SEMA3B-205ENST00000434030 AGPAT4-IT1Q9H0P7 198 aa15.59■□□□□ 0.09
SEMA3B-205ENST00000434030 MBD2Q9UBB5 411 aa15.59■□□□□ 0.09
SEMA3B-205ENST00000434030 FUT9Q9Y231 359 aa15.59■□□□□ 0.09
SEMA3B-205ENST00000434030 F5H768 121 aa15.58■□□□□ 0.08
SEMA3B-205ENST00000434030 ATP5G1P05496 136 aa15.58■□□□□ 0.08
SEMA3B-205ENST00000434030 ATP5G3P48201 142 aa15.58■□□□□ 0.08
SEMA3B-205ENST00000434030 CCDC28AQ8IWP9 274 aa15.58■□□□□ 0.08
SEMA3B-205ENST00000434030 C15orf53Q8NAA6 179 aa15.58■□□□□ 0.08
SEMA3B-205ENST00000434030 FXYD5Q96DB9 178 aa15.58■□□□□ 0.08
SEMA3B-205ENST00000434030 PAXXQ9BUH6 204 aa15.58■□□□□ 0.08
SEMA3B-205ENST00000434030 SMIM3Q9BZL3 60 aa15.58■□□□□ 0.08
SEMA3B-205ENST00000434030 SLC25A5P05141 298 aaKnown RBP15.57■□□□□ 0.08
SEMA3B-205ENST00000434030 OR10J4P0C629 311 aa15.57■□□□□ 0.08
SEMA3B-205ENST00000434030 RNF212Q495C1 297 aa15.57■□□□□ 0.08
SEMA3B-205ENST00000434030 RNF141Q8WVD5 230 aa15.57■□□□□ 0.08
SEMA3B-205ENST00000434030 FAM19A4Q96LR4 140 aa15.57■□□□□ 0.08
SEMA3B-205ENST00000434030 ALG5Q9Y673 324 aa15.57■□□□□ 0.08
SEMA3B-205ENST00000434030 M0R2N4 97 aa15.56■□□□□ 0.08
SEMA3B-205ENST00000434030 IFNA5P01569 189 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms