RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 KLF17Q5JT82 389 aaPredicted RBP10.66□□□□□ -0.7
COL6A3-207ENST00000433762 LYZL1Q6UWQ5 148 aa10.66□□□□□ -0.7
COL6A3-207ENST00000433762 SIRPDQ9H106 197 aa10.66□□□□□ -0.7
COL6A3-207ENST00000433762 PIEZO2Q9H5I5 2752 aa10.66□□□□□ -0.7
COL6A3-207ENST00000433762 IGHV7-81A0A0B4J1V7 117 aa10.65□□□□□ -0.7
COL6A3-207ENST00000433762 TMEM11P17152 192 aa10.65□□□□□ -0.7
COL6A3-207ENST00000433762 HIST1H1AQ02539 215 aaPredicted RBP10.65□□□□□ -0.7
COL6A3-207ENST00000433762 UBE2V1Q13404 147 aa10.65□□□□□ -0.7
COL6A3-207ENST00000433762 Q71RC1 249 aaPredicted RBP10.65□□□□□ -0.7
COL6A3-207ENST00000433762 OR1N2Q8NGR9 330 aa10.65□□□□□ -0.7
COL6A3-207ENST00000433762 LINC01546A6NGU7 62 aa10.65□□□□□ -0.71
COL6A3-207ENST00000433762 PPBPP02775 128 aa10.65□□□□□ -0.71
COL6A3-207ENST00000433762 FAM106CPP0CH98 169 aa10.65□□□□□ -0.71
COL6A3-207ENST00000433762 EGR2P11161 476 aaPredicted RBP10.65□□□□□ -0.71
COL6A3-207ENST00000433762 RELQ04864 619 aaPredicted RBP10.65□□□□□ -0.71
COL6A3-207ENST00000433762 LGALS9BQ3B8N2 356 aa10.65□□□□□ -0.71
COL6A3-207ENST00000433762 LINC01559Q495D7 138 aa10.65□□□□□ -0.71
COL6A3-207ENST00000433762 LGALS9CQ6DKI2 356 aa10.65□□□□□ -0.71
COL6A3-207ENST00000433762 PRELID3AQ96N28 172 aa10.65□□□□□ -0.71
COL6A3-207ENST00000433762 PRORYQ9H606 182 aa10.65□□□□□ -0.71
COL6A3-207ENST00000433762 NCBP2LA6PVI3 153 aaKnown RBP10.64□□□□□ -0.71
COL6A3-207ENST00000433762 COX8AP10176 69 aa10.64□□□□□ -0.71
COL6A3-207ENST00000433762 Q8N9W7 124 aa10.64□□□□□ -0.71
COL6A3-207ENST00000433762 SLC50A1Q9BRV3 221 aa10.64□□□□□ -0.71
COL6A3-207ENST00000433762 hDV102S1A0JD36 115 aa10.63□□□□□ -0.71
COL6A3-207ENST00000433762 FER1L6-AS1Q8NA97 138 aa10.63□□□□□ -0.71
COL6A3-207ENST00000433762 ZNF502Q8TBZ5 544 aa10.63□□□□□ -0.71
COL6A3-207ENST00000433762 MRPL53Q96EL3 112 aaKnown RBP10.63□□□□□ -0.71
COL6A3-207ENST00000433762 D6R8Y8 96 aa10.63□□□□□ -0.71
COL6A3-207ENST00000433762 UBE2E1P51965 193 aa10.63□□□□□ -0.71
COL6A3-207ENST00000433762 ZNF138P52744 262 aa10.63□□□□□ -0.71
COL6A3-207ENST00000433762 SIGLEC8Q9NYZ4 499 aa10.63□□□□□ -0.71
COL6A3-207ENST00000433762 CSN3P07498 182 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 PAX8Q06710 450 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 BVES-AS1Q5T3Y7 98 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 BCL6BQ8N143 479 aaPredicted RBP10.62□□□□□ -0.71
COL6A3-207ENST00000433762 DYNAPQ8N1N2 210 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 DEFB125Q8N687 156 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 ATMQ13315 3056 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 A0A096LNJ9 63 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 IGHV2-70DA0A0C4DH43 119 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 IGHG4P01861 327 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 HBDP02042 147 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 PTTG1IPP53801 180 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
COL6A3-207ENST00000433762 FBLN7Q53RD9 439 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 UNQ5815/PRO19632Q6UWF5 114 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 HIF1ANQ9NWT6 349 aa10.62□□□□□ -0.71
COL6A3-207ENST00000433762 IGKV2-40A0A087WW87 121 aaPredicted RBP10.61□□□□□ -0.71
COL6A3-207ENST00000433762 OR2T8A6NH00 312 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 FABP5P3A8MUU1 101 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 IGKV2D-40P01614 121 aaPredicted RBP10.61□□□□□ -0.71
COL6A3-207ENST00000433762 PSMG3-AS1Q96PY0 264 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 CBY1Q9Y3M2 126 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 A0A1W2PRD5 423 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 A0A1W2PRF3 423 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 A0A1W2PRM7 423 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 LY6HO94772 140 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
COL6A3-207ENST00000433762 MPV17L2Q567V2 206 aa10.61□□□□□ -0.71
COL6A3-207ENST00000433762 TMEM213A2RRL7 107 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 TCF21O43680 179 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 CD5LO43866 347 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 GOSR1O95249 250 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 RHOGP84095 191 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 PRR31Q5SQ13 230 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 AMN1Q8IY45 258 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 PIFOQ8TCI5 191 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 ASCL2Q99929 193 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 S4R3C0 116 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 K7EP13 123 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 CCL25O15444 150 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 BUB3O43684 328 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 NUDT3O95989 172 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 TPPP3Q9BW30 176 aa10.6□□□□□ -0.71
COL6A3-207ENST00000433762 TLN1Q9Y490 2541 aaKnown RBP10.6□□□□□ -0.71
COL6A3-207ENST00000433762 SIVA1O15304 175 aa10.59□□□□□ -0.71
COL6A3-207ENST00000433762 SFTPCP11686 197 aa10.59□□□□□ -0.71
COL6A3-207ENST00000433762 SEC11AP67812 179 aa10.59□□□□□ -0.71
COL6A3-207ENST00000433762 TRBV7-1A0A0A6YYK4 115 aa10.59□□□□□ -0.71
COL6A3-207ENST00000433762 ZFP36P26651 326 aaKnown RBP10.59□□□□□ -0.71
COL6A3-207ENST00000433762 GPR183P32249 361 aa10.59□□□□□ -0.71
COL6A3-207ENST00000433762 CKS2P33552 79 aa10.59□□□□□ -0.71
COL6A3-207ENST00000433762 CDSNQ15517 529 aa10.59□□□□□ -0.71
COL6A3-207ENST00000433762 VGLL1Q99990 258 aa10.59□□□□□ -0.71
COL6A3-207ENST00000433762 ARHGAP32A7KAX9 2087 aa10.59□□□□□ -0.71
COL6A3-207ENST00000433762 LY6DQ14210 128 aa10.58□□□□□ -0.72
COL6A3-207ENST00000433762 AJUBAQ96IF1 538 aa10.58□□□□□ -0.72
COL6A3-207ENST00000433762 NXT2Q9NPJ8 142 aaKnown RBP10.58□□□□□ -0.72
COL6A3-207ENST00000433762 TAX1BP3O14907 124 aa10.58□□□□□ -0.72
COL6A3-207ENST00000433762 ZNF80P51504 273 aaPredicted RBP10.58□□□□□ -0.72
COL6A3-207ENST00000433762 EFNA4P52798 201 aa10.58□□□□□ -0.72
COL6A3-207ENST00000433762 CRIP2P52943 208 aaPredicted RBP10.58□□□□□ -0.72
COL6A3-207ENST00000433762 C15orf32Q32M92 178 aa10.58□□□□□ -0.72
COL6A3-207ENST00000433762 OR9G4Q8NGQ1 327 aa10.58□□□□□ -0.72
COL6A3-207ENST00000433762 ZZEF1O43149 2961 aa10.57□□□□□ -0.72
COL6A3-207ENST00000433762 TWIST1Q15672 202 aa10.57□□□□□ -0.72
COL6A3-207ENST00000433762 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms