RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 MIEN1Q9BRT3 115 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 ZNF471Q9BX82 626 aaPredicted RBP2.91□□□□□ -1.94
USP54-206ENST00000433394 SMIM3Q9BZL3 60 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 LINC00470Q9BZP3 86 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 C11orf1Q9H5F2 150 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 CACYBPQ9HB71 228 aaKnown RBP2.91□□□□□ -1.94
USP54-206ENST00000433394 TAF9BQ9HBM6 251 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 PRTFDC1Q9NRG1 225 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 C14orf105Q9NVL8 296 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 TECTAO75443 2155 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 TRAV36DV7A0A075B6V5 113 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 SPTY2D1-AS1A0A0U1RR47 76 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 A0A1B0GX51 115 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 hADV38S2A0JD32 116 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 TMEM218A2RU14 115 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 TMEM235A6NFC5 223 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 SDHAF1A6NFY7 115 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 OR51F1A6NGY5 319 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 BBIP1A8MTZ0 92 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 CORTO00230 105 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 PIAS1O75925 651 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 TNFP01375 233 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 REG1AP05451 166 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 IL9P15248 144 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 EVI2AP22794 236 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 EVX1P49640 407 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 RAB5CP51148 216 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 DAPP51397 102 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 C20orf196Q8IYI0 205 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 C1orf158Q8N1D5 194 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 TCTEX1D1Q8N7M0 179 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 OR52L1Q8NGH7 329 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 GPR84Q9NQS5 396 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 PCTPQ9UKL6 214 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 ERG28Q9UKR5 140 aa2.9□□□□□ -1.95
USP54-206ENST00000433394 RIF1Q5UIP0 2472 aaKnown RBP2.9□□□□□ -1.95
USP54-206ENST00000433394 KNTC1P50748 2209 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 A0A0G2JND7 137 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 H3BPC8 53 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 CCL22O00626 93 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 NDUFB2O95178 105 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 HBA1P69905 142 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 PRDX4Q13162 271 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 SCGB2B2Q4G0G5 96 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 ARPINQ7Z6K5 226 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 GKN2Q86XP6 184 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 FANCMQ8IYD8 2048 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 CT55Q8WUE5 264 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 NAT14Q8WUY8 206 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 C10orf82Q8WW14 230 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 PSMG3Q9BT73 122 aaPredicted RBP2.89□□□□□ -1.95
USP54-206ENST00000433394 LPAR5Q9H1C0 372 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 CST9LQ9H4G1 147 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 UQCC1Q9NVA1 299 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 LAMTOR3Q9UHA4 124 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 NAT8BQ9UHF3 227 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 PSORS1C2Q9UIG4 136 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 LAMTOR2Q9Y2Q5 125 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 SDK1Q7Z5N4 2213 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 EML5Q05BV3 1969 aa2.89□□□□□ -1.95
USP54-206ENST00000433394 ASCC3Q8N3C0 2202 aaKnown RBP2.88□□□□□ -1.95
USP54-206ENST00000433394 UNC13CQ8NB66 2214 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 EP300Q09472 2414 aaPredicted RBP2.88□□□□□ -1.95
USP54-206ENST00000433394 MUC6Q6W4X9 2439 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 A0A087WX48 190 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 A0A0J9YX75 114 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 A0A1B0GW54 56 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 I3L521 148 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 IGHV1-69P01742 117 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 GZMBP10144 247 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 G6PCP35575 357 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 GABRA2P47869 451 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 CTBP2P56545 445 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 COPZ1P61923 177 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 RUNX1Q01196 453 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 PLCXD2Q0VAA5 305 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 COL5A1-AS1Q5SY13 56 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 Q6ZS52 159 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 GTF2H5Q6ZYL4 71 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 C1orf174Q8IYL3 243 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 TCTE3Q8IZS6 198 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 OR8I2Q8N0Y5 310 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 OR5A2Q8NGI9 324 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 OR13C8Q8NGS7 320 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 THEM6Q8WUY1 208 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 LCN9Q8WX39 176 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 MRPS24Q96EL2 167 aaKnown RBP2.88□□□□□ -1.95
USP54-206ENST00000433394 AP1S3Q96PC3 154 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 TMEM222Q9H0R3 208 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 RNASE7Q9H1E1 156 aaKnown RBP2.88□□□□□ -1.95
USP54-206ENST00000433394 MRPL27Q9P0M9 148 aaKnown RBP2.88□□□□□ -1.95
USP54-206ENST00000433394 DNAJC15Q9Y5T4 150 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 V9GYS6 101 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 MUC3AQ02505 3323 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 OTOGLQ3ZCN5 2332 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 PIEZO1Q92508 2521 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 ZNF292O60281 2723 aa2.88□□□□□ -1.95
USP54-206ENST00000433394 MDC1Q14676 2089 aaKnown RBP2.88□□□□□ -1.95
USP54-206ENST00000433394 VCANP13611 3396 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 FAM186AA6NE01 2351 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms