RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 TRAV8-6A0A0B4J262 113 aa9.98□□□□□ -0.81
LRRTM1-206ENST00000433224 ITLN2Q8WWU7 325 aaPredicted RBP9.98□□□□□ -0.81
LRRTM1-206ENST00000433224 LSM4Q9Y4Z0 139 aaKnown RBP9.98□□□□□ -0.81
LRRTM1-206ENST00000433224 E7EUB6 86 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 MSMBP08118 114 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 ID1P41134 155 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 RIPPLY3P57055 190 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 C8orf46Q8TAG6 207 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 YPEL4Q96NS1 127 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 CACNG7P62955 275 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 MYOZ3Q8TDC0 251 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 MOB4Q9Y3A3 225 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 PHLDA3Q9Y5J5 127 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 FMC1Q96HJ9 113 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
LRRTM1-206ENST00000433224 KIR2DL5BA0A0G2JN68 375 aa9.96□□□□□ -0.81
LRRTM1-206ENST00000433224 KIR2DL5BA0A0G2JPC4 375 aa9.96□□□□□ -0.81
LRRTM1-206ENST00000433224 PAX8Q06710 450 aa9.96□□□□□ -0.81
LRRTM1-206ENST00000433224 UBE2V1Q13404 147 aa9.96□□□□□ -0.81
LRRTM1-206ENST00000433224 Q1RN00 199 aa9.96□□□□□ -0.81
LRRTM1-206ENST00000433224 KIR2DL5AQ8N109 375 aa9.96□□□□□ -0.81
LRRTM1-206ENST00000433224 IGHV4-30-2A0A087WSY4 118 aa9.96□□□□□ -0.82
LRRTM1-206ENST00000433224 PSG9Q00887 426 aa9.96□□□□□ -0.82
LRRTM1-206ENST00000433224 Q5PR19 223 aa9.96□□□□□ -0.82
LRRTM1-206ENST00000433224 TEX43Q6ZNM6 134 aa9.96□□□□□ -0.82
LRRTM1-206ENST00000433224 MAP1LC3AQ9H492 121 aa9.96□□□□□ -0.82
LRRTM1-206ENST00000433224 TMEM160Q9NX00 188 aa9.96□□□□□ -0.82
LRRTM1-206ENST00000433224 MINOS1Q5TGZ0 78 aa9.96□□□□□ -0.82
LRRTM1-206ENST00000433224 FAM71F2Q6NXP2 309 aa9.96□□□□□ -0.82
LRRTM1-206ENST00000433224 MINOS1-NBL1R4GNA1 71 aa9.96□□□□□ -0.82
LRRTM1-206ENST00000433224 A0A0G2JLM5 398 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 IGLL1P15814 213 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 C1orf229Q6ZS94 237 aaPredicted RBP9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 ZNF502Q8TBZ5 544 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 Q96MF0 132 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 PSG8Q9UQ74 426 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 IGHV2-70DA0A0C4DH43 119 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 ITGB1BP1O14713 200 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 IGHV4-39P01824 125 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 ZFP36P26651 326 aaKnown RBP9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 ZNF562Q6V9R5 426 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 NPFFR1Q9GZQ6 430 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 KAAG1Q9UBP8 84 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 SYS1-DBNDD2H3BUS1 97 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 PVRIGQ6DKI7 326 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 COX11Q9Y6N1 276 aa9.95□□□□□ -0.82
LRRTM1-206ENST00000433224 NCR2O95944 276 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 ZNF688P0C7X2 276 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 TMEM95Q3KNT9 176 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 HIST2H2BCQ6DN03 193 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 ST20Q9HBF5 79 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 UBE2E1P51965 193 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 MEGF9Q9H1U4 602 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 SPCS1Q9Y6A9 102 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 LOC107984156A0A0G2JMH3 177 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 OVOL3O00110 214 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 TCRAP04437 139 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 RNASE4P34096 147 aaKnown RBP9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 ARL17AQ8IVW1 177 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 HIST1H4GQ99525 98 aa9.94□□□□□ -0.82
LRRTM1-206ENST00000433224 BRWD1-AS2P59051 145 aa9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 ORMDL3Q8N138 153 aa9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 PRSS22Q9GZN4 317 aa9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 RNF182Q8N6D2 247 aa9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 ARL6IP6Q8N6S5 226 aa9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 MRPL27Q9P0M9 148 aaKnown RBP9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 HCFC1P51610 2035 aa9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 OR4X2Q8NGF9 303 aa9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 OTORQ9NRC9 128 aa9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 SOX21Q9Y651 276 aaPredicted RBP9.93□□□□□ -0.82
LRRTM1-206ENST00000433224 IGHV1-69DA0A0B4J2H0 117 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 IGHV1-69P01742 117 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 ORAOV1Q8WV07 137 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 H3BVH4 76 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 IGHV4-38-2P0DP08 117 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 PET117Q6UWS5 81 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 TRGV9Q99603 122 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 FOXC2Q99958 501 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 EVI2AP22794 236 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 ATP5L2Q7Z4Y8 100 aa9.92□□□□□ -0.82
LRRTM1-206ENST00000433224 DAZAP2Q15038 168 aaPredicted RBP9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 SAPCD1Q5SSQ6 148 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 MORN5Q5VZ52 161 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 C11orf52Q96A22 123 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 ANKRD17O75179 2603 aaKnown RBP9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 D6R8Y8 96 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 SNRPD3P62318 126 aaKnown RBP9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 DGAT2L7PQ6IED9 249 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 FAM159AQ6UWV7 190 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 C17orf77Q96MU5 243 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 AKAP13Q12802 2813 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 PRR20EP86478 221 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 PRR20CP86479 221 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 PRR20DP86480 221 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 PRR20BP86481 221 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 PRR20AP86496 221 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 NSUN5P1Q3KNT7 163 aa9.91□□□□□ -0.82
LRRTM1-206ENST00000433224 DDB2Q92466 427 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms