RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 GFI1BQ5VTD9 330 aa11.31□□□□□ -0.6
ACTB-205ENST00000432588 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
ACTB-205ENST00000432588 OR1L4Q8NGR5 311 aa11.31□□□□□ -0.6
ACTB-205ENST00000432588 GNPNAT1Q96EK6 184 aaPredicted RBP11.31□□□□□ -0.6
ACTB-205ENST00000432588 LSM5Q9Y4Y9 91 aaKnown RBP11.31□□□□□ -0.6
ACTB-205ENST00000432588 FAM25EA8MYX2 175 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 C16orf90A8MZG2 172 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 PRAC2D3DTV9 90 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 CCSO14618 274 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 LEPP41159 167 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 MORN5Q5VZ52 161 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 NRARPQ7Z6K4 114 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 SAT2Q96F10 170 aaPredicted RBP11.3□□□□□ -0.6
ACTB-205ENST00000432588 ZNF503Q96F45 646 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 PFDN5Q99471 154 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 PARD6GQ9BYG4 376 aaPredicted RBP11.3□□□□□ -0.6
ACTB-205ENST00000432588 UQCC1Q9NVA1 299 aa11.3□□□□□ -0.6
ACTB-205ENST00000432588 RYR1P21817 5038 aa11.29□□□□□ -0.6
ACTB-205ENST00000432588 TRAV26-1A0A087WT03 109 aa11.29□□□□□ -0.6
ACTB-205ENST00000432588 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
ACTB-205ENST00000432588 H3BQ15 152 aa11.29□□□□□ -0.6
ACTB-205ENST00000432588 CST7O76096 145 aa11.29□□□□□ -0.6
ACTB-205ENST00000432588 PVALBP20472 110 aaPredicted RBP11.29□□□□□ -0.6
ACTB-205ENST00000432588 KIR3DS1Q14943 382 aa11.29□□□□□ -0.6
ACTB-205ENST00000432588 TTC32Q5I0X7 151 aa11.29□□□□□ -0.6
ACTB-205ENST00000432588 LINC00612Q8N6U2 182 aa11.29□□□□□ -0.6
ACTB-205ENST00000432588 ODF3Q96PU9 254 aa11.29□□□□□ -0.6
ACTB-205ENST00000432588 GAGE12BA1L429 117 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 J3KRW8 73 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 LYRM1O43325 122 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 ZNF253O75346 499 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 GAGE7O76087 117 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 GAGE12FP0CL80 117 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 GAGE12GP0CL81 117 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 GAGE12IP0CL82 117 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 MIC13Q5XKP0 118 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 C12orf45Q8N5I9 185 aaPredicted RBP11.28□□□□□ -0.6
ACTB-205ENST00000432588 RXFP4Q8TDU9 374 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 Q9H8V8 135 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 WDR83OSQ9Y284 106 aa11.28□□□□□ -0.6
ACTB-205ENST00000432588 TRAV5A0A0B4J249 113 aa11.27□□□□□ -0.61
ACTB-205ENST00000432588 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.61
ACTB-205ENST00000432588 NPIPB6E9PJ23 425 aa11.27□□□□□ -0.61
ACTB-205ENST00000432588 ZNF431Q8TF32 576 aaPredicted RBP11.27□□□□□ -0.61
ACTB-205ENST00000432588 TRAV6A0A075B6T7 132 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 A0A0J9YY99 117 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 H3BNG1 76 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 PLA2G10O15496 165 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 TCRBP04435 133 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 CT45A10P0DMU9 189 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 S100A11P31949 105 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
ACTB-205ENST00000432588 HBG1P69891 147 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 HBG2P69892 147 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 BAXQ07812 192 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 VWC2Q2TAL6 325 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 STX12Q86Y82 276 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
ACTB-205ENST00000432588 C2orf50Q96LR7 162 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 NUDT15Q9NV35 164 aa11.26□□□□□ -0.61
ACTB-205ENST00000432588 UBE2L5PA0A1B0GUS4 154 aa11.25□□□□□ -0.61
ACTB-205ENST00000432588 FAM24AA6NFZ4 105 aa11.25□□□□□ -0.61
ACTB-205ENST00000432588 CDK2AP2O75956 126 aa11.25□□□□□ -0.61
ACTB-205ENST00000432588 SLC25A5P05141 298 aaKnown RBP11.25□□□□□ -0.61
ACTB-205ENST00000432588 HOXA5P20719 270 aa11.25□□□□□ -0.61
ACTB-205ENST00000432588 SULT1A1P50225 295 aa11.25□□□□□ -0.61
ACTB-205ENST00000432588 S100A10P60903 97 aa11.25□□□□□ -0.61
ACTB-205ENST00000432588 DAZ2Q13117 558 aaKnown RBP11.25□□□□□ -0.61
ACTB-205ENST00000432588 ZNF680Q8NEM1 530 aa11.25□□□□□ -0.61
ACTB-205ENST00000432588 ZNF586Q9NXT0 402 aa11.25□□□□□ -0.61
ACTB-205ENST00000432588 PRELID1Q9Y255 219 aa11.25□□□□□ -0.61
ACTB-205ENST00000432588 TRBV19A0A075B6N1 114 aa11.24□□□□□ -0.61
ACTB-205ENST00000432588 SEC22CQ9BRL7 303 aa11.24□□□□□ -0.61
ACTB-205ENST00000432588 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
ACTB-205ENST00000432588 Q9H3A6 140 aa11.24□□□□□ -0.61
ACTB-205ENST00000432588 C11orf1Q9H5F2 150 aa11.24□□□□□ -0.61
ACTB-205ENST00000432588 LYRM2Q9NU23 88 aaPredicted RBP11.24□□□□□ -0.61
ACTB-205ENST00000432588 TIMM9Q9Y5J7 89 aa11.24□□□□□ -0.61
ACTB-205ENST00000432588 TRGV2A0A075B6R0 118 aa11.23□□□□□ -0.61
ACTB-205ENST00000432588 C7orf71A4D174 169 aa11.23□□□□□ -0.61
ACTB-205ENST00000432588 PDE6HQ13956 83 aa11.23□□□□□ -0.61
ACTB-205ENST00000432588 Q6ZTI0 123 aa11.23□□□□□ -0.61
ACTB-205ENST00000432588 CHAC2Q8WUX2 184 aa11.23□□□□□ -0.61
ACTB-205ENST00000432588 LINC00477Q96M19 166 aa11.23□□□□□ -0.61
ACTB-205ENST00000432588 TMPRSS5Q9H3S3 457 aa11.23□□□□□ -0.61
ACTB-205ENST00000432588 TMEM14CQ9P0S9 112 aa11.23□□□□□ -0.61
ACTB-205ENST00000432588 HSPG2P98160 4391 aa11.23□□□□□ -0.61
ACTB-205ENST00000432588 A0A1W2PPQ1 181 aa11.22□□□□□ -0.61
ACTB-205ENST00000432588 IGSF23A1L1A6 192 aa11.22□□□□□ -0.61
ACTB-205ENST00000432588 M0R3E3 92 aa11.22□□□□□ -0.61
ACTB-205ENST00000432588 MPDU1O75352 247 aa11.22□□□□□ -0.61
ACTB-205ENST00000432588 H2AFB2P0C5Z0 115 aa11.22□□□□□ -0.61
ACTB-205ENST00000432588 HIST1H1EP10412 219 aaKnown RBP11.22□□□□□ -0.61
ACTB-205ENST00000432588 FGF7P21781 194 aa11.22□□□□□ -0.61
ACTB-205ENST00000432588 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
ACTB-205ENST00000432588 ESRGQ1W209 222 aa11.22□□□□□ -0.61
ACTB-205ENST00000432588 TMEM252Q8N6L7 170 aa11.22□□□□□ -0.61
ACTB-205ENST00000432588 AAMDCQ9H7C9 122 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms