RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TMEM136Q6ZRR5 245 aa15.04■□□□□ -0
VRK2-205ENST00000432057 NUP35Q8NFH5 326 aa15.04■□□□□ -0
VRK2-205ENST00000432057 DAZAP1Q96EP5 407 aaKnown RBP15.04■□□□□ -0
VRK2-205ENST00000432057 GNB1LQ9BYB4 327 aa15.04■□□□□ -0
VRK2-205ENST00000432057 VPREB3Q9UKI3 123 aa15.04■□□□□ -0
VRK2-205ENST00000432057 ZFP30Q9Y2G7 519 aa15.04■□□□□ -0
VRK2-205ENST00000432057 U3KQE9 123 aa15.04■□□□□ -0
VRK2-205ENST00000432057 SMIM6P0DI80 62 aa15.03■□□□□ -0
VRK2-205ENST00000432057 S100A2P29034 98 aa15.03■□□□□ -0
VRK2-205ENST00000432057 WDR73Q6P4I2 378 aa15.03■□□□□ -0
VRK2-205ENST00000432057 Q6YL49 198 aa15.03■□□□□ -0
VRK2-205ENST00000432057 NAT8BQ9UHF3 227 aa15.03■□□□□ -0
VRK2-205ENST00000432057 ZNF580Q9UK33 172 aa15.03■□□□□ -0
VRK2-205ENST00000432057 C1orf194Q5T5A4 169 aa15.03■□□□□ -0
VRK2-205ENST00000432057 UNQ9165/PRO28630Q6UXU0 137 aa15.03■□□□□ -0
VRK2-205ENST00000432057 TCF24Q7RTU0 167 aa15.03■□□□□ -0
VRK2-205ENST00000432057 OR4X2Q8NGF9 303 aa15.03■□□□□ -0
VRK2-205ENST00000432057 A0A1B0GUS0 222 aa15.02■□□□□ -0
VRK2-205ENST00000432057 SERTM2A0A1B0GWG4 89 aa15.02■□□□□ -0
VRK2-205ENST00000432057 HIGD1CA8MV81 97 aa15.02■□□□□ -0
VRK2-205ENST00000432057 ZNF705FA8MVS1 300 aaPredicted RBP15.02■□□□□ -0
VRK2-205ENST00000432057 FABP4P15090 132 aa15.02■□□□□ -0
VRK2-205ENST00000432057 RAB4BP61018 213 aa15.02■□□□□ -0
VRK2-205ENST00000432057 CT83Q5H943 113 aa15.02■□□□□ -0
VRK2-205ENST00000432057 WFDC11Q8NEX6 87 aa15.02■□□□□ -0
VRK2-205ENST00000432057 C8orf49Q96NF6 230 aa15.02■□□□□ -0
VRK2-205ENST00000432057 NPIPB6E9PJ23 425 aa15.01□□□□□ -0.01
VRK2-205ENST00000432057 NDUFA4O00483 81 aa15.01□□□□□ -0.01
VRK2-205ENST00000432057 GRIFINA4D1Z8 144 aa15.01□□□□□ -0.01
VRK2-205ENST00000432057 MT-ND6P03923 174 aa15.01□□□□□ -0.01
VRK2-205ENST00000432057 COX19Q49B96 90 aa15.01□□□□□ -0.01
VRK2-205ENST00000432057 RNF182Q8N6D2 247 aa15.01□□□□□ -0.01
VRK2-205ENST00000432057 OR10D4PQ8NGN7 298 aa15.01□□□□□ -0.01
VRK2-205ENST00000432057 HIST1H2BLQ99880 126 aa15.01□□□□□ -0.01
VRK2-205ENST00000432057 ZNF469Q96JG9 3925 aaPredicted RBP15□□□□□ -0.01
VRK2-205ENST00000432057 A0A0G2JLM5 398 aa15□□□□□ -0.01
VRK2-205ENST00000432057 A8MWL6 223 aa15□□□□□ -0.01
VRK2-205ENST00000432057 HOXA3O43365 443 aaPredicted RBP15□□□□□ -0.01
VRK2-205ENST00000432057 C10orf99Q6UWK7 81 aa15□□□□□ -0.01
VRK2-205ENST00000432057 ARL6IP6Q8N6S5 226 aa15□□□□□ -0.01
VRK2-205ENST00000432057 GTSF1Q8WW33 167 aa15□□□□□ -0.01
VRK2-205ENST00000432057 C16orf54Q6UWD8 224 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 OR4B1Q8NGF8 309 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 VGLL1Q99990 258 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 SLC50A1Q9BRV3 221 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 GZMBP10144 247 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 CRIP1P50238 77 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 LCN12Q6JVE5 192 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 OR2D3Q8NGH3 330 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 Q8TAT8 98 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 WIPF2Q8TF74 440 aaPredicted RBP14.99□□□□□ -0.01
VRK2-205ENST00000432057 PDZD2O15018 2839 aa14.99□□□□□ -0.01
VRK2-205ENST00000432057 PRAC2D3DTV9 90 aa14.98□□□□□ -0.01
VRK2-205ENST00000432057 SMAD7O15105 426 aaKnown RBP14.98□□□□□ -0.01
VRK2-205ENST00000432057 HLA-DQA1P01909 254 aa14.98□□□□□ -0.01
VRK2-205ENST00000432057 PSMB8P28062 276 aa14.98□□□□□ -0.01
VRK2-205ENST00000432057 IL17RELQ6ZVW7 336 aa14.98□□□□□ -0.01
VRK2-205ENST00000432057 GLMPQ8WWB7 406 aa14.98□□□□□ -0.01
VRK2-205ENST00000432057 AMBPP02760 352 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 KIAA1644Q3SXP7 199 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 GDF5OSQ5U4N7 250 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 C8orf86Q6ZUL3 223 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 TRAV8-2A0A0B4J237 113 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 CRISP2P16562 243 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 RASL11AQ6T310 242 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 TMEM256Q8N2U0 113 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 PGLYRP4Q96LB8 373 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 PACRGQ96M98 296 aaPredicted RBP14.97□□□□□ -0.01
VRK2-205ENST00000432057 NPFFR1Q9GZQ6 430 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 GFRA4Q9GZZ7 299 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 ZNF702PQ9H963 129 aa14.97□□□□□ -0.01
VRK2-205ENST00000432057 GCN1Q92616 2671 aaKnown RBP14.96□□□□□ -0.01
VRK2-205ENST00000432057 CT45A10P0DMU9 189 aa14.96□□□□□ -0.01
VRK2-205ENST00000432057 PRR25Q96S07 402 aa14.96□□□□□ -0.01
VRK2-205ENST00000432057 TP53TG3Q9ULZ0 132 aa14.96□□□□□ -0.01
VRK2-205ENST00000432057 FLNAP21333 2647 aaKnown RBP14.96□□□□□ -0.02
VRK2-205ENST00000432057 A0A1B0GXF2 115 aa14.95□□□□□ -0.02
VRK2-205ENST00000432057 SLAQ13239 276 aa14.95□□□□□ -0.02
VRK2-205ENST00000432057 FAM209BQ5JX69 171 aa14.95□□□□□ -0.02
VRK2-205ENST00000432057 ATP5L2Q7Z4Y8 100 aa14.95□□□□□ -0.02
VRK2-205ENST00000432057 PRDM13Q9H4Q3 707 aa14.95□□□□□ -0.02
VRK2-205ENST00000432057 FBLL1A6NHQ2 334 aaKnown RBP14.95□□□□□ -0.02
VRK2-205ENST00000432057 CAMPP49913 170 aa14.95□□□□□ -0.02
VRK2-205ENST00000432057 ERCC8Q13216 396 aa14.95□□□□□ -0.02
VRK2-205ENST00000432057 PYY3Q5JQD4 70 aa14.95□□□□□ -0.02
VRK2-205ENST00000432057 RBPMS2Q6ZRY4 209 aaKnown RBP14.95□□□□□ -0.02
VRK2-205ENST00000432057 PEF1Q9UBV8 284 aaKnown RBP14.95□□□□□ -0.02
VRK2-205ENST00000432057 PCP4L1A6NKN8 68 aa14.94□□□□□ -0.02
VRK2-205ENST00000432057 F2Z2F3 143 aa14.94□□□□□ -0.02
VRK2-205ENST00000432057 NUPR1O60356 82 aa14.94□□□□□ -0.02
VRK2-205ENST00000432057 APCSP02743 223 aa14.94□□□□□ -0.02
VRK2-205ENST00000432057 SAPCD1Q5SSQ6 148 aa14.94□□□□□ -0.02
VRK2-205ENST00000432057 DUX5Q96PT3 197 aa14.94□□□□□ -0.02
VRK2-205ENST00000432057 FAM231BA6NCW3 169 aa14.93□□□□□ -0.02
VRK2-205ENST00000432057 SH2D1AO60880 128 aa14.93□□□□□ -0.02
VRK2-205ENST00000432057 SIGLECL1Q8N7X8 197 aa14.93□□□□□ -0.02
VRK2-205ENST00000432057 SSBP4Q9BWG4 385 aaPredicted RBP14.93□□□□□ -0.02
VRK2-205ENST00000432057 TLN2Q9Y4G6 2542 aa14.93□□□□□ -0.02
VRK2-205ENST00000432057 TMEM89A2RUT3 159 aa14.93□□□□□ -0.02
VRK2-205ENST00000432057 RPLP1P05386 114 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms