RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 DCTN3O75935 186 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 CNIH1O95406 144 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 IFNA4P05014 189 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 GZMHP20718 246 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 CD200P41217 278 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 PCBD1P61457 104 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 COPZ1P61923 177 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR2F1Q13607 317 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 SPA17Q15506 151 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 TSNQ15631 228 aaKnown RBP1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 TPRXLQ17RH7 258 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 RGS21Q2M5E4 152 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 SPANXN3Q5MJ09 141 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR10K2Q6IF99 312 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 C5orf46Q6UWT4 87 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 SLC36A1Q7Z2H8 476 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 COMMD6Q7Z4G1 85 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 VMO1Q7Z5L0 202 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 RPP25LQ8N5L8 163 aaKnown RBP1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 DEFB125Q8N687 156 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 C10orf82Q8WW14 230 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 ASB17Q8WXJ9 295 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 MALSU1Q96EH3 234 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 TMEM222Q9H0R3 208 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR51I1Q9H343 314 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 DNAH1Q9P2D7 4330 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 C11orf86A6NJI1 115 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 LST1O00453 97 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 COX7A2LO14548 114 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 NDUFB3O43676 98 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 IFNA14P01570 189 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 TFPTP0C1Z6 253 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 HIST1H1EP10412 219 aaKnown RBP1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 NEFHP12036 1026 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 BRS3P32247 399 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 GABRA2P47869 451 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 MARCKSL1P49006 195 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 DYNLT3P51808 116 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 AP2S1P53680 142 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 TAS2R30P59541 319 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 KRTAP12-4P60329 112 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 HES1Q14469 280 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 RSU1Q15404 277 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR8B8Q15620 311 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 TNFAIP8L3Q5GJ75 292 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 RASSF6Q6ZTQ3 369 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 GID4Q8IVV7 300 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 C20orf196Q8IYI0 205 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 SLC22A24Q8N4F4 322 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR2T27Q8NH04 317 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 CCDC115Q96NT0 180 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 TSPAN32Q96QS1 320 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR4C12Q96R67 309 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 PECRQ9BY49 303 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 DPY30Q9C005 99 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR2J1Q9GZK6 312 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 CACYBPQ9HB71 228 aaKnown RBP1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 KAAG1Q9UBP8 84 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 GUCA1BQ9UMX6 200 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 RNF11Q9Y3C5 154 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 DOCK11Q5JSL3 2073 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 ARFGEF3Q5TH69 2177 aa1.28□□□□□ -2.2
HMGB1P27-201ENST00000431429 RYR2Q92736 4967 aa1.28□□□□□ -2.21
HMGB1P27-201ENST00000431429 UBR4Q5T4S7 5183 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 HERC2O95714 4834 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 SNRNP200O75643 2136 aaKnown RBP1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 HEATR5BQ9P2D3 2071 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 TRGV4A0A0C4DH28 118 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 A0A1W2PQL4 384 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR4C45A6NMZ5 311 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 A8MUN3 132 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 ZNF878C9JN71 531 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 H3BQF6 201 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 FAAHO00519 579 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 SMIM24O75264 130 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 S1PR2O95136 353 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 NPYP01303 97 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 HMGN2P05204 90 aaKnown RBP1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 RBP1P09455 135 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR5G3P0C626 314 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 ANP32AP39687 249 aaKnown RBP1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 RPL27AP46776 148 aaKnown RBP1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 BLCAPP62952 87 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 GLO1Q04760 184 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 HIST3H3Q16695 136 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 PCOTHQ58A44 107 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 C1orf140Q5VVS0 124 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 LPCAT4Q643R3 524 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 DCXRQ7Z4W1 244 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 PACRGLQ8N7B6 248 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR9Q1Q8NGQ5 310 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR13D1Q8NGV5 346 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 SLC25A40Q8TBP6 338 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 C12orf43Q96C57 262 aaKnown RBP1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 SDF2Q99470 211 aa1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 V9GYY5 206 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 HEATR1Q9H583 2144 aaKnown RBP1.27□□□□□ -2.21
HMGB1P27-201ENST00000431429 DMBT1Q9UGM3 2413 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 A0A0G2JQZ4 141 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 CLDN24A6NM45 220 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms