RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ARF6P62330 175 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 C2orf91Q6ZV80 131 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 ZNF491Q8N8L2 437 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 C1RLQ9NZP8 487 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 MSRB1Q9NZV6 116 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 RNF24Q9Y225 148 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 CBY3A6NI87 242 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 A8MWL6 223 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 LY6LH3BQJ8 138 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 NUDT3O95989 172 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 IGHG4P01861 327 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 IL4P05112 153 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 SMCPP49901 116 aaPredicted RBP5.62□□□□□ -1.51
COL28A1-202ENST00000430711 ATP5IP56385 69 aaPredicted RBP5.62□□□□□ -1.51
COL28A1-202ENST00000430711 PLP1P60201 277 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 ANKRD39Q53RE8 183 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 RASL11AQ6T310 242 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 MRPL52Q86TS9 123 aaKnown RBP5.62□□□□□ -1.51
COL28A1-202ENST00000430711 AMN1Q8IY45 258 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 ZNF492Q9P255 531 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 ONECUT1Q9UBC0 465 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 KAAG1Q9UBP8 84 aa5.62□□□□□ -1.51
COL28A1-202ENST00000430711 MRPS16Q9Y3D3 137 aaKnown RBP5.62□□□□□ -1.51
COL28A1-202ENST00000430711 PPIAL4CA0A0B4J2A2 164 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 FAM90A27PA6NNH2 459 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 H3BRN7 92 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 CRXO43186 299 aaPredicted RBP5.61□□□□□ -1.51
COL28A1-202ENST00000430711 HLA-DRB1P01911 266 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 PPIAL4GP0DN37 164 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 FCGR2BP31994 310 aaPredicted RBP5.61□□□□□ -1.51
COL28A1-202ENST00000430711 COX19Q49B96 90 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 BVES-AS1Q5T3Y7 98 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 PRSS57Q6UWY2 283 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 ATP5L2Q7Z4Y8 100 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 CFHR4Q92496 578 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 FANCD2OSQ96PS1 177 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 RASL11BQ9BPW5 248 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 NGBQ9NPG2 151 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 SCRT2Q9NQ03 307 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 PSG8Q9UQ74 426 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 FBN2P35556 2912 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 SPTAN1Q13813 2472 aaKnown RBP5.61□□□□□ -1.51
COL28A1-202ENST00000430711 ABCA12Q86UK0 2595 aa5.61□□□□□ -1.51
COL28A1-202ENST00000430711 UBR5O95071 2799 aaPredicted RBP5.61□□□□□ -1.51
COL28A1-202ENST00000430711 IGHV3OR16-13A0A075B7E8 117 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 IGHV3-74A0A0B4J1X5 117 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 K7EMI3 77 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 K7EP13 123 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 PRRG2O14669 202 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 CHEK1O14757 476 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 NDUFS7O75251 213 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 CRYABP02511 175 aaKnown RBP5.6□□□□□ -1.51
COL28A1-202ENST00000430711 PPIFP30405 207 aaKnown RBP5.6□□□□□ -1.51
COL28A1-202ENST00000430711 MC5RP33032 325 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 LGALS7P47929 136 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 PLGLAQ15195 96 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 TMEM30BQ3MIR4 351 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 C8orf31Q8N9H6 132 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 OTORQ9NRC9 128 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 DOPEY2Q9Y3R5 2298 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 ABCA2Q9BZC7 2435 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 TRAV8-6A0A0B4J262 113 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 IGHV3-66A0A0C4DH42 116 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 A0A1W2PPR1 153 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 PRAC2D3DTV9 90 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 D6R8Y8 96 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 SPRY2O43597 315 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 CNIH1O95406 144 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 SFTPCP11686 197 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 GATA1P15976 413 aaPredicted RBP5.6□□□□□ -1.51
COL28A1-202ENST00000430711 HTR1DP28221 377 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 LYZL1Q6UWQ5 148 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 RPEQ96AT9 228 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 RNF125Q96EQ8 232 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 VGLL1Q99990 258 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 SHANK2-AS3Q9BTD1 123 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 CHRDL1Q9BU40 450 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 SMAD5-AS1Q9Y6J3 95 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 FBN3Q75N90 2809 aa5.6□□□□□ -1.51
COL28A1-202ENST00000430711 C20orf202A1L168 122 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 FGF6P10767 208 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 RBPJQ06330 500 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 LY6DQ14210 128 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 ZNF672Q499Z4 452 aaPredicted RBP5.59□□□□□ -1.51
COL28A1-202ENST00000430711 IGF2-ASQ6U949 168 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 OR8A1Q8NGG7 326 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 ORAOV1Q8WV07 137 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 DAZAP1Q96EP5 407 aaKnown RBP5.59□□□□□ -1.51
COL28A1-202ENST00000430711 ZNF747Q9BV97 191 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 SIGLEC8Q9NYZ4 499 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.59□□□□□ -1.51
COL28A1-202ENST00000430711 SERTM2A0A1B0GWG4 89 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 LINC01548A6NM66 108 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 SH2D1AO60880 128 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 EGR2P11161 476 aaPredicted RBP5.59□□□□□ -1.51
COL28A1-202ENST00000430711 UQCRFS1P47985 274 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 ERCC8Q13216 396 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 UBE2V1Q13404 147 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 PSG3Q16557 428 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms