RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 BPIFA4PQ86YQ2 179 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 TMEM252Q8N6L7 170 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 LINC00612Q8N6U2 182 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 ZNRF2Q8NHG8 242 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 LRRC20Q8TCA0 184 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 RNF141Q8WVD5 230 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 C2orf50Q96LR7 162 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 LINC01587Q99440 93 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 SLC50A1Q9BRV3 221 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 CCDC32Q9BV29 185 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 KRTAP1-5Q9BYS1 174 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 UQCC1Q9NVA1 299 aa8.23□□□□□ -1.09
HDAC4-202ENST00000430200 SIX6O95475 246 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 HOXA5P20719 270 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 SULT1A1P50225 295 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 CNPY1Q3B7I2 92 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 RNF212Q495C1 297 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 PRR9Q5T870 116 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 Q6ZQT7 251 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 TMEM256Q8N2U0 113 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 TMEM263Q8WUH6 116 aaKnown RBP8.22□□□□□ -1.09
HDAC4-202ENST00000430200 C16orf74Q96GX8 76 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 NOP10Q9NPE3 64 aaKnown RBP8.22□□□□□ -1.09
HDAC4-202ENST00000430200 SLC39A9Q9NUM3 307 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 OR5AC2Q9NZP5 309 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 PXMP4Q9Y6I8 212 aa8.22□□□□□ -1.09
HDAC4-202ENST00000430200 F5H768 121 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 H0YIZ8 118 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 FGF7P21781 194 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 S100A7P31151 101 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 B2MP61769 119 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 BAXQ07812 192 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 ERCC8Q13216 396 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 ASAH1Q13510 395 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 THAP6Q8TBB0 222 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 DNAJC4Q9NNZ3 241 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 LINC00588Q9Y4M8 146 aa8.21□□□□□ -1.1
HDAC4-202ENST00000430200 TRBV19A0A075B6N1 114 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 TRAV12-3A0A0B4J271 114 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 H7BYZ3 331 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 NUDT3O95989 172 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 ATP5G1P05496 136 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 RPL29P47914 159 aaKnown RBP8.2□□□□□ -1.1
HDAC4-202ENST00000430200 ATP5G3P48201 142 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 NHLH2Q02577 135 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 TNP2Q05952 138 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 BTN1A1Q13410 526 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 C15orf53Q8NAA6 179 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 FAM167A-AS1Q96KT0 104 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 FAM19A4Q96LR4 140 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 SLC25A2Q9BXI2 301 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 NPCDR1Q9BY65 106 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
HDAC4-202ENST00000430200 GPN1Q9HCN4 374 aaPredicted RBP8.2□□□□□ -1.1
HDAC4-202ENST00000430200 IGKV2-40A0A087WW87 121 aaPredicted RBP8.19□□□□□ -1.1
HDAC4-202ENST00000430200 FAM240BA0A1B0GVZ2 78 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 CBY3A6NI87 242 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 IGKV2D-40P01614 121 aaPredicted RBP8.19□□□□□ -1.1
HDAC4-202ENST00000430200 CD300CQ08708 224 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 Q6ZTI0 123 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 MIR17HGQ75NE6 70 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 EXOC3-AS1Q8N2X6 119 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 C11orf72Q8NBR9 251 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 OR10J6PQ8NGY7 276 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 TMPRSS5Q9H3S3 457 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 PPP1R14DQ9NXH3 145 aa8.19□□□□□ -1.1
HDAC4-202ENST00000430200 TIMM8BQ9Y5J9 83 aaPredicted RBP8.19□□□□□ -1.1
HDAC4-202ENST00000430200 TRAV26-1A0A087WT03 109 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 NBDYA0A0U1RRE5 68 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 GAGE12BA1L429 117 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 ZNF253O75346 499 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 EIF3GO75821 320 aaKnown RBP eCLIP8.18□□□□□ -1.1
HDAC4-202ENST00000430200 GAGE7O76087 117 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 GAGE12FP0CL80 117 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 GAGE12GP0CL81 117 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 GAGE12IP0CL82 117 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 H2BFSP57053 126 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 LRRC37A5PQ49AS3 106 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 STX12Q86Y82 276 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 OR1L4Q8NGR5 311 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 CHAC2Q8WUX2 184 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 ODF3Q96PU9 254 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 PFDN5Q99471 154 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 C20orf144Q9BQM9 153 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 NDUFA13Q9P0J0 144 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 TMEM14CQ9P0S9 112 aa8.18□□□□□ -1.1
HDAC4-202ENST00000430200 A0A0J9YY99 117 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 KLLNB2CW77 178 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 UPK1BO75841 260 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 S100A11P31949 105 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 CLINT1Q14677 625 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 GUK1Q16774 197 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 C1orf134Q5TEV5 83 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 ZNF493Q6ZR52 646 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 Q6ZRG5 221 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 S100A7AQ86SG5 101 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 ZFAND2AQ8N6M9 145 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 OR5C1Q8NGR4 320 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 Q8TAT8 98 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 BLNKQ8WV28 456 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms