RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TRBV19A0A075B6N1 114 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 IGHV3-72A0A0B4J1Y9 119 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 A0A1B0GUT8 65 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 LEPROTL1O95214 131 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 GPR6P46095 362 aaPredicted RBP6.88□□□□□ -1.31
GABPB1-205ENST00000429662 PLGLAQ15195 96 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 Q56UQ5 140 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 NPBQ8NG41 125 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 KRTAP4-12Q9BQ66 201 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 PMCHL2Q9BQD1 86 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
GABPB1-205ENST00000429662 MAP1LC3CQ9BXW4 147 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 VWC2LB2RUY7 222 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 M0R1W7 72 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 CCL21O00585 134 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 CNIH1O95406 144 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 IGLV2-11P01706 119 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 HTR1DP28221 377 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 CSN1S1P47710 185 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 RPS20P60866 119 aaKnown RBP6.87□□□□□ -1.31
GABPB1-205ENST00000429662 PSG9Q00887 426 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 FBXL19-AS1Q494R0 122 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 LINC00322Q6ZN03 302 aaPredicted RBP6.87□□□□□ -1.31
GABPB1-205ENST00000429662 GOLT1AQ6ZVE7 132 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 PRNTQ86SH4 94 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 CIARTQ8N365 385 aaPredicted RBP6.87□□□□□ -1.31
GABPB1-205ENST00000429662 MUC15Q8N387 334 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 LY6G5BQ8NDX9 201 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 ZNF738Q8NE65 137 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 OR11H6Q8NGC7 330 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 FBXL15Q9H469 300 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 AAMDCQ9H7C9 122 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 DPM3Q9P2X0 92 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
GABPB1-205ENST00000429662 HIVEP2P31629 2446 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 IGHV1-24A0A0C4DH33 117 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 WI2-2373I1.2A0A1W2PRP0 233 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 OR4C46A6NHA9 309 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 A6NNC1 897 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 NPIPB5A8MRT5 1133 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 OOSP1A8MZH6 123 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 K7EIM0 57 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 NBR2O15453 112 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 NDUFA3O95167 84 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 IGKV1-17P01599 117 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 HLA-DRB1P01911 266 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 APOHP02749 345 aaPredicted RBP6.86□□□□□ -1.31
GABPB1-205ENST00000429662 CT45A10P0DMU9 189 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 IGLL1P15814 213 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 CNTFRP26992 372 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 MFAP4P55083 255 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 PSG3Q16557 428 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 FAM120AOSQ5T036 256 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 LCN12Q6JVE5 192 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 COX8CQ7Z4L0 72 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 SPATA12Q7Z6I5 190 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 IGFBPL1Q8WX77 278 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 TIMD4Q96H15 378 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 URB1-AS1Q96HZ7 61 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 THYN1Q9P016 225 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 PSG8Q9UQ74 426 aa6.86□□□□□ -1.31
GABPB1-205ENST00000429662 SH2D7A6NKC9 451 aaPredicted RBP6.85□□□□□ -1.31
GABPB1-205ENST00000429662 SRSF2Q01130 221 aaKnown RBP6.85□□□□□ -1.31
GABPB1-205ENST00000429662 PSMG4Q5JS54 123 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 SAPCD1Q5SSQ6 148 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 CCDC144NLQ6NUI1 221 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 SLC25A34Q6PIV7 304 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 C12orf54Q6X4T0 127 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 SIGLEC15Q6ZMC9 328 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 ZNF493Q6ZR52 646 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 C1orf122Q6ZSJ8 110 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 STPG4Q8N801 248 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 ZNF491Q8N8L2 437 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 WFDC11Q8NEX6 87 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 DPF1Q92782 380 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 RNF125Q96EQ8 232 aa6.85□□□□□ -1.31
GABPB1-205ENST00000429662 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.84□□□□□ -1.31
GABPB1-205ENST00000429662 MRPS12O15235 138 aaKnown RBP6.84□□□□□ -1.31
GABPB1-205ENST00000429662 NPSP0C0P6 89 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 COX7A1P24310 79 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 RELQ04864 619 aaPredicted RBP6.84□□□□□ -1.31
GABPB1-205ENST00000429662 RUSC1-AS1Q66K80 236 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 LEMD1Q68G75 181 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 FA2HQ7L5A8 372 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 EXOC3-AS1Q8N2X6 119 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 TTC9CQ8N5M4 171 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 OR10AG1Q8NH19 301 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 NEU4Q8WWR8 484 aaPredicted RBP6.84□□□□□ -1.31
GABPB1-205ENST00000429662 ZNF414Q96IQ9 312 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 SGK494Q96LW2 274 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 COX11Q9Y6N1 276 aa6.84□□□□□ -1.31
GABPB1-205ENST00000429662 YLPM1P49750 1951 aaKnown RBP6.84□□□□□ -1.32
GABPB1-205ENST00000429662 IGHV3-21A0A0B4J1V1 117 aa6.83□□□□□ -1.32
GABPB1-205ENST00000429662 TIMM23O14925 209 aa6.83□□□□□ -1.32
GABPB1-205ENST00000429662 GNG7O60262 68 aa6.83□□□□□ -1.32
GABPB1-205ENST00000429662 NDUFB8O95169 186 aa6.83□□□□□ -1.32
GABPB1-205ENST00000429662 IL4P05112 153 aa6.83□□□□□ -1.32
GABPB1-205ENST00000429662 RPL7P18124 248 aaKnown RBP6.83□□□□□ -1.32
GABPB1-205ENST00000429662 PRTN3P24158 256 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms