RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 Q6ZS92 163 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 AAMDCQ9H7C9 122 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 OTORQ9NRC9 128 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 BUB1B-PAK6H3BSN5 160 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 ERCC8Q13216 396 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 PCP2Q8IVA1 136 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 ATP5IP56385 69 aaPredicted RBP9.85□□□□□ -0.83
CDH3-202ENST00000429102 OR10AG1Q8NH19 301 aa9.85□□□□□ -0.83
CDH3-202ENST00000429102 PRSS22Q9GZN4 317 aa9.85□□□□□ -0.83
CDH3-202ENST00000429102 ST20Q9HBF5 79 aa9.85□□□□□ -0.83
CDH3-202ENST00000429102 LINC00527Q9UJ94 153 aa9.85□□□□□ -0.83
CDH3-202ENST00000429102 K7ERU9 68 aa9.85□□□□□ -0.83
CDH3-202ENST00000429102 RASL11AQ6T310 242 aa9.85□□□□□ -0.83
CDH3-202ENST00000429102 TEX22C9J3V5 150 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 ECSCRQ19T08 205 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 RNF182Q8N6D2 247 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 FAM169BQ8N8A8 192 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 HIF1ANQ9NWT6 349 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 DKK2Q9UBU2 259 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 TRBV19A0A075B6N1 114 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 IGHV2-70DA0A0C4DH43 119 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 RHOGP84095 191 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 CHCHD1Q96BP2 118 aaKnown RBP9.84□□□□□ -0.83
CDH3-202ENST00000429102 SIGLEC8Q9NYZ4 499 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 UFC1Q9Y3C8 167 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 ZFHX3Q15911 3703 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 ZNF785A8K8V0 405 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 IGLV2-11P01706 119 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 VGLL1Q99990 258 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 RABAC1Q9UI14 185 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 KLF12Q9Y4X4 402 aa9.84□□□□□ -0.83
CDH3-202ENST00000429102 MRPL52Q86TS9 123 aaKnown RBP9.83□□□□□ -0.84
CDH3-202ENST00000429102 ZNF747Q9BV97 191 aa9.83□□□□□ -0.84
CDH3-202ENST00000429102 COL27A1Q8IZC6 1860 aaPredicted RBP9.83□□□□□ -0.84
CDH3-202ENST00000429102 IGHV3OR16-10A0A075B7F0 116 aa9.83□□□□□ -0.84
CDH3-202ENST00000429102 C1RLQ9NZP8 487 aa9.83□□□□□ -0.84
CDH3-202ENST00000429102 TRAV30A0A087WSZ9 112 aa9.83□□□□□ -0.84
CDH3-202ENST00000429102 SH2D1AO60880 128 aa9.83□□□□□ -0.84
CDH3-202ENST00000429102 TMEM97Q5BJF2 176 aa9.83□□□□□ -0.84
CDH3-202ENST00000429102 ZNF491Q8N8L2 437 aa9.83□□□□□ -0.84
CDH3-202ENST00000429102 OR4A5Q8NH83 315 aa9.83□□□□□ -0.84
CDH3-202ENST00000429102 SCRT2Q9NQ03 307 aa9.83□□□□□ -0.84
CDH3-202ENST00000429102 SETD2Q9BYW2 2564 aaPredicted RBP9.83□□□□□ -0.84
CDH3-202ENST00000429102 C2CD3Q4AC94 2353 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 NPYP01303 97 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 CD3EP07766 207 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 FAM162BQ5T6X4 162 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 PEF1Q9UBV8 284 aaKnown RBP9.82□□□□□ -0.84
CDH3-202ENST00000429102 K7EIM0 57 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 Q5PR19 223 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 USP9YO00507 2555 aaPredicted RBP9.82□□□□□ -0.84
CDH3-202ENST00000429102 I3L2K1 104 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 PLP1P60201 277 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 PSG3Q16557 428 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 SIGLEC15Q6ZMC9 328 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 LINC00574Q9H8X3 128 aa9.82□□□□□ -0.84
CDH3-202ENST00000429102 TRAV26-2A0A0B4J265 109 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 K7ERJ3 54 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 SCGB2A2Q13296 93 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 PET117Q6UWS5 81 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 NUP37Q8NFH4 326 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 ZNF414Q96IQ9 312 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 NDFIP1Q9BT67 221 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 CRYGCP07315 174 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 ZNF80P51504 273 aaPredicted RBP9.81□□□□□ -0.84
CDH3-202ENST00000429102 FOXC1Q12948 553 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 Q6ZQT7 251 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 NCOR1P1Q9H4R4 102 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 TMEM160Q9NX00 188 aa9.81□□□□□ -0.84
CDH3-202ENST00000429102 EGR2P11161 476 aaPredicted RBP9.81□□□□□ -0.84
CDH3-202ENST00000429102 MRPL51Q4U2R6 128 aaKnown RBP9.81□□□□□ -0.84
CDH3-202ENST00000429102 A1L4Q6 167 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 SHISA9B4DS77 424 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 HAX1O00165 279 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 GTSCR1Q86UQ5 136 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 DEFB125Q8N687 156 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 SPCS1Q9Y6A9 102 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 NDUFS7O75251 213 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 DLX6P56179 175 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 KIR3DS1Q14943 382 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 PIP4P1Q86T03 277 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 ORMDL3Q8N138 153 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 SHANK2-AS3Q9BTD1 123 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 CACNA1AO00555 2505 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 DEFB1P60022 68 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 HIST1H1AQ02539 215 aaPredicted RBP9.8□□□□□ -0.84
CDH3-202ENST00000429102 GTF2H5Q6ZYL4 71 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 ASCL5Q7RTU5 278 aa9.8□□□□□ -0.84
CDH3-202ENST00000429102 ARL3P36405 182 aa9.79□□□□□ -0.84
CDH3-202ENST00000429102 NDPQ00604 133 aa9.79□□□□□ -0.84
CDH3-202ENST00000429102 ZNF672Q499Z4 452 aaPredicted RBP9.79□□□□□ -0.84
CDH3-202ENST00000429102 NHP2Q9NX24 153 aaKnown RBP9.79□□□□□ -0.84
CDH3-202ENST00000429102 ZNF492Q9P255 531 aa9.79□□□□□ -0.84
CDH3-202ENST00000429102 PRAC2D3DTV9 90 aa9.79□□□□□ -0.84
CDH3-202ENST00000429102 TGFAP01135 160 aa9.79□□□□□ -0.84
CDH3-202ENST00000429102 IGLV1-47P01700 117 aa9.79□□□□□ -0.84
CDH3-202ENST00000429102 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
CDH3-202ENST00000429102 POLQO75417 2590 aa9.79□□□□□ -0.84
CDH3-202ENST00000429102 A6NDN8 102 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 NBR2O15453 112 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms