RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 F11RQ9Y624 299 aaKnown RBP6.99□□□□□ -1.29
CDH13-202ENST00000428848 TRAV8-1A0A0A6YYK1 113 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 A1L4Q6 167 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 B9A039 149 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 K7EQM0 130 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 CD3EP07766 207 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 CNTFRP26992 372 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 COL8A1P27658 744 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 ZNF747Q9BV97 191 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 SLC25A39Q9BZJ4 359 aaPredicted RBP6.98□□□□□ -1.29
CDH13-202ENST00000428848 HIF1ANQ9NWT6 349 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 ZGRF1Q86YA3 2104 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.98□□□□□ -1.29
CDH13-202ENST00000428848 IGHV3-72A0A0B4J1Y9 119 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 I3L2K1 104 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 CHEK1O14757 476 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 SMAD7O15105 426 aaKnown RBP6.98□□□□□ -1.29
CDH13-202ENST00000428848 IGLV1-47P01700 117 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 THBDP07204 575 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 ARL3P36405 182 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 RPL24P83731 157 aaKnown RBP6.98□□□□□ -1.29
CDH13-202ENST00000428848 IGSF10Q6WRI0 2623 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 ADAMTSL5Q6ZMM2 481 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 TMUB1Q9BVT8 246 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 TMEM133Q9H2Q1 129 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 GEMIN7Q9H840 131 aaKnown RBP6.98□□□□□ -1.29
CDH13-202ENST00000428848 THYN1Q9P016 225 aa6.98□□□□□ -1.29
CDH13-202ENST00000428848 FASNP49327 2511 aaKnown RBP6.97□□□□□ -1.29
CDH13-202ENST00000428848 IGHV3-21A0A0B4J1V1 117 aa6.97□□□□□ -1.29
CDH13-202ENST00000428848 TRBV7-9A0A0J9YWB2 115 aa6.97□□□□□ -1.29
CDH13-202ENST00000428848 ZNF207O43670 478 aaKnown RBP6.97□□□□□ -1.29
CDH13-202ENST00000428848 ENSAO43768 121 aaKnown RBP6.97□□□□□ -1.29
CDH13-202ENST00000428848 PF4V1P10720 104 aa6.97□□□□□ -1.29
CDH13-202ENST00000428848 CSN1S1P47710 185 aa6.97□□□□□ -1.29
CDH13-202ENST00000428848 ZNF138P52744 262 aa6.97□□□□□ -1.29
CDH13-202ENST00000428848 FOXE3Q13461 319 aa6.97□□□□□ -1.29
CDH13-202ENST00000428848 CCL17Q92583 94 aa6.97□□□□□ -1.29
CDH13-202ENST00000428848 RNASE6Q93091 150 aaKnown RBP6.97□□□□□ -1.29
CDH13-202ENST00000428848 SIGLEC8Q9NYZ4 499 aa6.97□□□□□ -1.29
CDH13-202ENST00000428848 PKDREJQ9NTG1 2253 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 A0A1B0GUT8 65 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 HERV-K104P63124 156 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 LGALS9BQ3B8N2 356 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 SAMD5Q5TGI4 173 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 LGALS9CQ6DKI2 356 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 GOLT1AQ6ZVE7 132 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 EXOC3-AS1Q8N2X6 119 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 TMEM75Q8N9X5 138 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 HILPDAQ9Y5L2 63 aa6.96□□□□□ -1.29
CDH13-202ENST00000428848 TSSC4Q9Y5U2 329 aaPredicted RBP6.96□□□□□ -1.29
CDH13-202ENST00000428848 TRBV19A0A075B6N1 114 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 IGHV1-3A0A0C4DH29 117 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 MRPS12O15235 138 aaKnown RBP6.96□□□□□ -1.3
CDH13-202ENST00000428848 SNAI2O43623 268 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 IGKV1-17P01599 117 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 ARMS2P0C7Q2 107 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 APELAP0DMC3 54 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 LYZP61626 148 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 KLRB1Q12918 225 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 FBXL19-AS1Q494R0 122 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 SIGLEC15Q6ZMC9 328 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 PRNTQ86SH4 94 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 PPP1R27Q86WC6 154 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 BBC3Q96PG8 261 aaPredicted RBP6.96□□□□□ -1.3
CDH13-202ENST00000428848 AP5S1Q9NUS5 200 aa6.96□□□□□ -1.3
CDH13-202ENST00000428848 SMG1Q96Q15 3661 aaKnown RBP6.96□□□□□ -1.3
CDH13-202ENST00000428848 BAHCC1Q9P281 2608 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 A0A1B0GW15 77 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 H3BRN7 92 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 SMIM13P0DJ93 91 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 CRIP1P50238 77 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 RIGQ13278 110 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 PSMG4Q5JS54 123 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 ZNF493Q6ZR52 646 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 LYPD1Q8N2G4 141 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 VGLL1Q99990 258 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 NAA38Q9BRA0 125 aaKnown RBP6.95□□□□□ -1.3
CDH13-202ENST00000428848 SHANK2-AS3Q9BTD1 123 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 MCRIP2Q9BUT9 160 aaKnown RBP6.95□□□□□ -1.3
CDH13-202ENST00000428848 RP1L1Q8IWN7 2480 aaPredicted RBP6.95□□□□□ -1.3
CDH13-202ENST00000428848 PCNX1Q96RV3 2341 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 SHISA9B4DS77 424 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 F8W1H4 67 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 SRSF12Q8WXF0 261 aaKnown RBP6.95□□□□□ -1.3
CDH13-202ENST00000428848 RAB37Q96AX2 223 aa6.95□□□□□ -1.3
CDH13-202ENST00000428848 SRSF8Q9BRL6 282 aaKnown RBP6.95□□□□□ -1.3
CDH13-202ENST00000428848 SPANXB1Q9NS25 103 aaPredicted RBP6.95□□□□□ -1.3
CDH13-202ENST00000428848 A0A096LNJ9 63 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 BUB1B-PAK6H3BSN5 160 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 K7EIM0 57 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 CT45A10P0DMU9 189 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 RAX2Q96IS3 184 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 C17orf77Q96MU5 243 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 RNF5Q99942 180 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 RASL11BQ9BPW5 248 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 MRPL16Q9NX20 251 aaKnown RBP6.94□□□□□ -1.3
CDH13-202ENST00000428848 PSG8Q9UQ74 426 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 PTPRQQ9UMZ3 2332 aa6.94□□□□□ -1.3
CDH13-202ENST00000428848 E7EQL1 145 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms