RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 MORN3Q6PF18 240 aaPredicted RBP16.36■□□□□ 0.21
PTPN18-205ENST00000428843 EXOC3-AS1Q8N2X6 119 aa16.36■□□□□ 0.21
PTPN18-205ENST00000428843 PHYHIPLQ96FC7 376 aa16.36■□□□□ 0.21
PTPN18-205ENST00000428843 GIG44P09565 113 aaPredicted RBP16.35■□□□□ 0.21
PTPN18-205ENST00000428843 C4BPBP20851 252 aa16.35■□□□□ 0.21
PTPN18-205ENST00000428843 DEFB135Q30KP9 77 aa16.35■□□□□ 0.21
PTPN18-205ENST00000428843 Q6ZWC4 215 aa16.35■□□□□ 0.21
PTPN18-205ENST00000428843 OR8A1Q8NGG7 326 aa16.35■□□□□ 0.21
PTPN18-205ENST00000428843 CLUHP3Q96NS8 147 aa16.35■□□□□ 0.21
PTPN18-205ENST00000428843 CTXND1A0A1B0GTU2 59 aa16.34■□□□□ 0.21
PTPN18-205ENST00000428843 A8MTW9 85 aa16.34■□□□□ 0.21
PTPN18-205ENST00000428843 PRAC2D3DTV9 90 aa16.34■□□□□ 0.21
PTPN18-205ENST00000428843 DUSP14O95147 198 aaKnown RBP16.34■□□□□ 0.21
PTPN18-205ENST00000428843 CNN1P51911 297 aaKnown RBP16.34■□□□□ 0.21
PTPN18-205ENST00000428843 ICAM4Q14773 271 aa16.34■□□□□ 0.21
PTPN18-205ENST00000428843 MRPL53Q96EL3 112 aaKnown RBP16.34■□□□□ 0.21
PTPN18-205ENST00000428843 RCHY1Q96PM5 261 aa16.34■□□□□ 0.21
PTPN18-205ENST00000428843 AAMDCQ9H7C9 122 aa16.34■□□□□ 0.21
PTPN18-205ENST00000428843 PRELID1Q9Y255 219 aa16.34■□□□□ 0.21
PTPN18-205ENST00000428843 U3KQK5 164 aa16.34■□□□□ 0.21
PTPN18-205ENST00000428843 HUWE1Q7Z6Z7 4374 aaKnown RBP16.33■□□□□ 0.21
PTPN18-205ENST00000428843 M0R3E3 92 aa16.33■□□□□ 0.2
PTPN18-205ENST00000428843 NKX2-5P52952 324 aaPredicted RBP16.33■□□□□ 0.2
PTPN18-205ENST00000428843 NUTF2P61970 127 aaKnown RBP16.33■□□□□ 0.2
PTPN18-205ENST00000428843 HIST1H1AQ02539 215 aaPredicted RBP16.33■□□□□ 0.2
PTPN18-205ENST00000428843 SLC51BQ86UW2 128 aa16.33■□□□□ 0.2
PTPN18-205ENST00000428843 TMED6Q8WW62 240 aa16.33■□□□□ 0.2
PTPN18-205ENST00000428843 OVOL2Q9BRP0 275 aa16.33■□□□□ 0.2
PTPN18-205ENST00000428843 CXorf1O96002 111 aa16.32■□□□□ 0.2
PTPN18-205ENST00000428843 GCHFRP30047 84 aa16.32■□□□□ 0.2
PTPN18-205ENST00000428843 FXYD7P58549 80 aa16.32■□□□□ 0.2
PTPN18-205ENST00000428843 RANP62826 216 aaKnown RBP16.32■□□□□ 0.2
PTPN18-205ENST00000428843 LYPD1Q8N2G4 141 aa16.32■□□□□ 0.2
PTPN18-205ENST00000428843 RNF183Q96D59 192 aa16.32■□□□□ 0.2
PTPN18-205ENST00000428843 Q9H3A6 140 aa16.32■□□□□ 0.2
PTPN18-205ENST00000428843 COL7A1Q02388 2944 aa16.32■□□□□ 0.2
PTPN18-205ENST00000428843 UMAD1C9J7I0 102 aa16.31■□□□□ 0.2
PTPN18-205ENST00000428843 SPRY2O43597 315 aa16.31■□□□□ 0.2
PTPN18-205ENST00000428843 SLC35B3Q9H1N7 401 aa16.31■□□□□ 0.2
PTPN18-205ENST00000428843 TP53TG1Q9Y2A0 90 aa16.31■□□□□ 0.2
PTPN18-205ENST00000428843 TGP01266 2768 aa16.3■□□□□ 0.2
PTPN18-205ENST00000428843 FHITP49789 147 aa16.3■□□□□ 0.2
PTPN18-205ENST00000428843 AMTNQ6UX39 209 aa16.3■□□□□ 0.2
PTPN18-205ENST00000428843 OR10J6PQ8NGY7 276 aa16.3■□□□□ 0.2
PTPN18-205ENST00000428843 SUN5Q8TC36 379 aa16.3■□□□□ 0.2
PTPN18-205ENST00000428843 XCL2Q9UBD3 114 aa16.3■□□□□ 0.2
PTPN18-205ENST00000428843 FGF8P55075 233 aaPredicted RBP16.29■□□□□ 0.2
PTPN18-205ENST00000428843 FAM213BQ8TBF2 198 aa16.29■□□□□ 0.2
PTPN18-205ENST00000428843 TMEM167BQ9NRX6 74 aa16.29■□□□□ 0.2
PTPN18-205ENST00000428843 MAP1LC3B2A6NCE7 125 aa16.28■□□□□ 0.2
PTPN18-205ENST00000428843 EIF5AL1Q6IS14 154 aaKnown RBP16.28■□□□□ 0.2
PTPN18-205ENST00000428843 IQCF2Q8IXL9 164 aa16.28■□□□□ 0.2
PTPN18-205ENST00000428843 C1QTNF4Q9BXJ3 329 aa16.28■□□□□ 0.2
PTPN18-205ENST00000428843 MAP1LC3BQ9GZQ8 125 aa16.28■□□□□ 0.2
PTPN18-205ENST00000428843 OTORQ9NRC9 128 aa16.28■□□□□ 0.2
PTPN18-205ENST00000428843 PGPA6NDG6 321 aa16.27■□□□□ 0.2
PTPN18-205ENST00000428843 DPPA3Q6W0C5 159 aa16.27■□□□□ 0.2
PTPN18-205ENST00000428843 CSNK1G2-AS1Q8NCQ2 148 aa16.27■□□□□ 0.2
PTPN18-205ENST00000428843 TMPRSS5Q9H3S3 457 aa16.27■□□□□ 0.2
PTPN18-205ENST00000428843 NPIPB6E9PJ23 425 aa16.26■□□□□ 0.19
PTPN18-205ENST00000428843 PPP1R14DQ9NXH3 145 aa16.26■□□□□ 0.19
PTPN18-205ENST00000428843 IGKV2-40A0A087WW87 121 aaPredicted RBP16.25■□□□□ 0.19
PTPN18-205ENST00000428843 M0R2Z0 102 aa16.25■□□□□ 0.19
PTPN18-205ENST00000428843 IGKV2D-40P01614 121 aaPredicted RBP16.25■□□□□ 0.19
PTPN18-205ENST00000428843 CSN1S1P47710 185 aa16.25■□□□□ 0.19
PTPN18-205ENST00000428843 ERCC8Q13216 396 aa16.25■□□□□ 0.19
PTPN18-205ENST00000428843 SPINK13Q1W4C9 94 aa16.25■□□□□ 0.19
PTPN18-205ENST00000428843 FAM74A1Q5RGS3 127 aa16.25■□□□□ 0.19
PTPN18-205ENST00000428843 BOLA1Q9Y3E2 137 aa16.25■□□□□ 0.19
PTPN18-205ENST00000428843 BOLA2-SMG1P6H3BVE0 249 aa16.24■□□□□ 0.19
PTPN18-205ENST00000428843 OR11H2Q8NH07 326 aa16.24■□□□□ 0.19
PTPN18-205ENST00000428843 MBD3L1Q8WWY6 194 aa16.24■□□□□ 0.19
PTPN18-205ENST00000428843 TENM3Q9P273 2699 aa16.24■□□□□ 0.19
PTPN18-205ENST00000428843 NBEAL2Q6ZNJ1 2754 aa16.24■□□□□ 0.19
PTPN18-205ENST00000428843 AMBPP02760 352 aa16.23■□□□□ 0.19
PTPN18-205ENST00000428843 CT45A10P0DMU9 189 aa16.23■□□□□ 0.19
PTPN18-205ENST00000428843 SULT1A2P50226 295 aa16.23■□□□□ 0.19
PTPN18-205ENST00000428843 RAB5CP51148 216 aa16.23■□□□□ 0.19
PTPN18-205ENST00000428843 CMTM2Q8TAZ6 248 aa16.23■□□□□ 0.19
PTPN18-205ENST00000428843 RXFP4Q8TDU9 374 aa16.23■□□□□ 0.19
PTPN18-205ENST00000428843 SFT2D1Q8WV19 159 aa16.23■□□□□ 0.19
PTPN18-205ENST00000428843 RARRES2Q99969 163 aa16.23■□□□□ 0.19
PTPN18-205ENST00000428843 DIRC3C9JPN6 131 aa16.22■□□□□ 0.19
PTPN18-205ENST00000428843 C9orf47Q6ZRZ4 202 aa16.22■□□□□ 0.19
PTPN18-205ENST00000428843 VGLL1Q99990 258 aa16.22■□□□□ 0.19
PTPN18-205ENST00000428843 AGPAT4-IT1Q9H0P7 198 aa16.22■□□□□ 0.19
PTPN18-205ENST00000428843 RPH3ALQ9UNE2 315 aa16.22■□□□□ 0.19
PTPN18-205ENST00000428843 CRXO43186 299 aaPredicted RBP16.21■□□□□ 0.19
PTPN18-205ENST00000428843 SLC25A5P05141 298 aaKnown RBP16.21■□□□□ 0.19
PTPN18-205ENST00000428843 H2AFB1P0C5Y9 115 aa16.21■□□□□ 0.19
PTPN18-205ENST00000428843 IGF2BP2-AS1Q96M15 143 aa16.21■□□□□ 0.19
PTPN18-205ENST00000428843 LINC00477Q96M19 166 aa16.21■□□□□ 0.19
PTPN18-205ENST00000428843 TRAV12-2A0A075B6T6 113 aa16.2■□□□□ 0.18
PTPN18-205ENST00000428843 A0A1B0GV50 99 aa16.2■□□□□ 0.18
PTPN18-205ENST00000428843 A0A1W2PRE2 83 aa16.2■□□□□ 0.18
PTPN18-205ENST00000428843 RBAKDNA6NC62 111 aa16.2■□□□□ 0.18
PTPN18-205ENST00000428843 GGTLC3B5MD39 225 aa16.2■□□□□ 0.18
PTPN18-205ENST00000428843 UBE2G2P60604 165 aa16.2■□□□□ 0.18
PTPN18-205ENST00000428843 SUMO1P63165 101 aaKnown RBP16.2■□□□□ 0.18
PTPN18-205ENST00000428843 GNG5P63218 68 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms