RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 POLEQ07864 2286 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 LY6HO94772 140 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 GUSBP1Q15486 140 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 SPINK13Q1W4C9 94 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 C1orf122Q6ZSJ8 110 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 TRAV3A0A0B4J244 114 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 PRSS29PA6NIE9 313 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 ARMS2P0C7Q2 107 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 MAJINQ3KP22 176 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 SHANK2-AS3Q9BTD1 123 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 DIDO1Q9BTC0 2240 aaKnown RBP7.23□□□□□ -1.25
CTNND1-208ENST00000428599 GBF1Q92538 1859 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 IGKV1-12A0A0C4DH73 117 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 IGKV1D-12P01611 117 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 GAGE6Q13070 117 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 DMRTC2Q8IXT2 367 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-208ENST00000428599 IGHV2-70DA0A0C4DH43 119 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 AGMATQ9BSE5 352 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 KLK9Q9UKQ9 250 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 KIAA1671Q9BY89 1806 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 IGHV1OR15-1A0A075B7D0 117 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 A0A0A6YYD4 124 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 WFDC1Q9HC57 220 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 LY96Q9Y6Y9 160 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 NMSQ5H8A3 153 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 SCRT2Q9NQ03 307 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 TCTEX1D4Q5JR98 221 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 NUP35Q8NFH5 326 aa7.22□□□□□ -1.25
CTNND1-208ENST00000428599 IGKV2D-24A0A075B6R9 120 aa7.21□□□□□ -1.25
CTNND1-208ENST00000428599 IGKV1D-17A0A075B6S4 117 aa7.21□□□□□ -1.25
CTNND1-208ENST00000428599 ZNRF2Q8NHG8 242 aa7.21□□□□□ -1.25
CTNND1-208ENST00000428599 IGF2BP2-AS1Q96M15 143 aa7.21□□□□□ -1.25
CTNND1-208ENST00000428599 UBL5Q9BZL1 73 aa7.21□□□□□ -1.25
CTNND1-208ENST00000428599 TMEM242Q9NWH2 141 aa7.21□□□□□ -1.25
CTNND1-208ENST00000428599 IGKV1-5P01602 117 aa7.21□□□□□ -1.25
CTNND1-208ENST00000428599 DSCR8Q96T75 97 aa7.21□□□□□ -1.25
CTNND1-208ENST00000428599 TP53TG1Q9Y2A0 90 aa7.21□□□□□ -1.25
CTNND1-208ENST00000428599 CACNA1DQ01668 2161 aa7.21□□□□□ -1.26
CTNND1-208ENST00000428599 CRLF1O75462 422 aa7.21□□□□□ -1.26
CTNND1-208ENST00000428599 ANGP03950 147 aaKnown RBP7.21□□□□□ -1.26
CTNND1-208ENST00000428599 Q86TA4 180 aa7.21□□□□□ -1.26
CTNND1-208ENST00000428599 CACNA1HO95180 2353 aa7.21□□□□□ -1.26
CTNND1-208ENST00000428599 NXPH4O95158 308 aa7.21□□□□□ -1.26
CTNND1-208ENST00000428599 PIP4P1Q86T03 277 aa7.21□□□□□ -1.26
CTNND1-208ENST00000428599 NDUFAF3Q9BU61 184 aa7.21□□□□□ -1.26
CTNND1-208ENST00000428599 GFRA4Q9GZZ7 299 aa7.21□□□□□ -1.26
CTNND1-208ENST00000428599 PNRC2Q9NPJ4 139 aaKnown RBP7.21□□□□□ -1.26
CTNND1-208ENST00000428599 HEATR1Q9H583 2144 aaKnown RBP7.21□□□□□ -1.26
CTNND1-208ENST00000428599 IGKV1OR2-108A0A075B7D4 117 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 IGKV1D-8A0A087WSZ0 117 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 MYLKQ15746 1914 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 NUP210Q8TEM1 1887 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-208ENST00000428599 TRBV6-6A0A0A6YYG2 114 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 FNDC10F2Z333 226 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 NDUFA4O00483 81 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 TMEM75Q8N9X5 138 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 GSN-AS1Q9NRJ2 163 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 IGKV1-27A0A075B6S5 117 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 SMKR1H3BMG3 65 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 PFN1P07737 140 aaKnown RBP7.2□□□□□ -1.26
CTNND1-208ENST00000428599 CDKN1BP46527 198 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 FER1L5A0AVI2 2057 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 C5orf63A6NC05 138 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 CFHR2P36980 270 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 ZC2HC1BQ5TFG8 222 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 TSSC4Q9Y5U2 329 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-208ENST00000428599 RNASE2P10153 161 aaKnown RBP7.2□□□□□ -1.26
CTNND1-208ENST00000428599 YPEL3P61236 119 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-208ENST00000428599 C1orf194Q5T5A4 169 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 GFI1Q99684 422 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 REG4Q9BYZ8 158 aa7.2□□□□□ -1.26
CTNND1-208ENST00000428599 TCF15Q12870 199 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 TMEM14EPQ6UXP3 125 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 hADV29S1A0JD25 119 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 Q6P435 159 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 IGFL3Q6UXB1 125 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 MRPL27Q9P0M9 148 aaKnown RBP7.19□□□□□ -1.26
CTNND1-208ENST00000428599 AKAP6Q13023 2319 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 TRAV1-1A0A0B4J248 108 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 LINC00473A8K010 186 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 A0A096LPF7 62 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 C9JAW5 83 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 ELANEP08246 267 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 HAMPP81172 84 aa7.19□□□□□ -1.26
CTNND1-208ENST00000428599 RPP25LQ8N5L8 163 aaKnown RBP7.19□□□□□ -1.26
CTNND1-208ENST00000428599 SPTBN1Q01082 2364 aaKnown RBP7.19□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BKO60814 126 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BJP06899 126 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BOP23527 126 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 LMO1P25800 156 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BBP33778 126 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BDP58876 126 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BCP62807 126 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST2H2BEQ16778 126 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-208ENST00000428599 PRR31Q5SQ13 230 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BHQ93079 126 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BNQ99877 126 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BMQ99879 126 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms