RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FCN2Q15485 313 aa13.02□□□□□ -0.33
PSPC1-202ENST00000427943 LRRC37A5PQ49AS3 106 aa13.02□□□□□ -0.33
PSPC1-202ENST00000427943 TMEM256Q8N2U0 113 aa13.02□□□□□ -0.33
PSPC1-202ENST00000427943 OR10J6PQ8NGY7 276 aa13.02□□□□□ -0.33
PSPC1-202ENST00000427943 SAT2Q96F10 170 aaPredicted RBP13.02□□□□□ -0.33
PSPC1-202ENST00000427943 ZNF586Q9NXT0 402 aa13.02□□□□□ -0.33
PSPC1-202ENST00000427943 PTTG2Q9NZH5 202 aa13.02□□□□□ -0.33
PSPC1-202ENST00000427943 M0R2N4 97 aa13.01□□□□□ -0.33
PSPC1-202ENST00000427943 NHLH2Q02577 135 aa13.01□□□□□ -0.33
PSPC1-202ENST00000427943 ATP6V1FQ16864 119 aa13.01□□□□□ -0.33
PSPC1-202ENST00000427943 OR5AC2Q9NZP5 309 aa13.01□□□□□ -0.33
PSPC1-202ENST00000427943 J3KRW8 73 aa13□□□□□ -0.33
PSPC1-202ENST00000427943 TAS2R60P59551 318 aa13□□□□□ -0.33
PSPC1-202ENST00000427943 GUK1Q16774 197 aa13□□□□□ -0.33
PSPC1-202ENST00000427943 THAP6Q8TBB0 222 aa13□□□□□ -0.33
PSPC1-202ENST00000427943 C16orf74Q96GX8 76 aa13□□□□□ -0.33
PSPC1-202ENST00000427943 NPCDR1Q9BY65 106 aa13□□□□□ -0.33
PSPC1-202ENST00000427943 HECTD4Q9Y4D8 3996 aa13□□□□□ -0.33
PSPC1-202ENST00000427943 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
PSPC1-202ENST00000427943 GFI1BQ5VTD9 330 aa12.99□□□□□ -0.33
PSPC1-202ENST00000427943 OR5C1Q8NGR4 320 aa12.99□□□□□ -0.33
PSPC1-202ENST00000427943 CHAC2Q8WUX2 184 aa12.99□□□□□ -0.33
PSPC1-202ENST00000427943 IGLV2-18A0A075B6J9 118 aa12.98□□□□□ -0.33
PSPC1-202ENST00000427943 INMT-MINDY4F8WBC2 141 aa12.98□□□□□ -0.33
PSPC1-202ENST00000427943 PRAF2O60831 178 aa12.98□□□□□ -0.33
PSPC1-202ENST00000427943 MPDU1O75352 247 aa12.98□□□□□ -0.33
PSPC1-202ENST00000427943 RLN2P04090 185 aa12.98□□□□□ -0.33
PSPC1-202ENST00000427943 PYYP10082 97 aa12.98□□□□□ -0.33
PSPC1-202ENST00000427943 CLINT1Q14677 625 aa12.98□□□□□ -0.33
PSPC1-202ENST00000427943 NMES1Q9C002 83 aa12.98□□□□□ -0.33
PSPC1-202ENST00000427943 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
PSPC1-202ENST00000427943 E5RGE8 158 aa12.97□□□□□ -0.33
PSPC1-202ENST00000427943 NPIPB6E9PJ23 425 aa12.97□□□□□ -0.33
PSPC1-202ENST00000427943 F5H768 121 aa12.97□□□□□ -0.33
PSPC1-202ENST00000427943 H0YIZ8 118 aa12.97□□□□□ -0.33
PSPC1-202ENST00000427943 H7BYZ3 331 aa12.97□□□□□ -0.33
PSPC1-202ENST00000427943 M0R3E3 92 aa12.97□□□□□ -0.33
PSPC1-202ENST00000427943 CT45A10P0DMU9 189 aa12.97□□□□□ -0.33
PSPC1-202ENST00000427943 RNASE8Q8TDE3 154 aaKnown RBP12.97□□□□□ -0.33
PSPC1-202ENST00000427943 SLC25A31Q9H0C2 315 aa12.97□□□□□ -0.33
PSPC1-202ENST00000427943 NOP10Q9NPE3 64 aaKnown RBP12.97□□□□□ -0.33
PSPC1-202ENST00000427943 ZNF253O75346 499 aa12.96□□□□□ -0.33
PSPC1-202ENST00000427943 NDUFB4O95168 129 aa12.96□□□□□ -0.33
PSPC1-202ENST00000427943 TMEM263Q8WUH6 116 aaKnown RBP12.96□□□□□ -0.33
PSPC1-202ENST00000427943 BLNKQ8WV28 456 aa12.96□□□□□ -0.33
PSPC1-202ENST00000427943 C20orf144Q9BQM9 153 aa12.96□□□□□ -0.33
PSPC1-202ENST00000427943 TMEM14CQ9P0S9 112 aa12.96□□□□□ -0.33
PSPC1-202ENST00000427943 TIMM8BQ9Y5J9 83 aaPredicted RBP12.96□□□□□ -0.33
PSPC1-202ENST00000427943 ATP5G1P05496 136 aa12.95□□□□□ -0.34
PSPC1-202ENST00000427943 HIST1H1EP10412 219 aaKnown RBP12.95□□□□□ -0.34
PSPC1-202ENST00000427943 LEPP41159 167 aa12.95□□□□□ -0.34
PSPC1-202ENST00000427943 ATP5G3P48201 142 aa12.95□□□□□ -0.34
PSPC1-202ENST00000427943 H2BFSP57053 126 aa12.95□□□□□ -0.34
PSPC1-202ENST00000427943 ERCC8Q13216 396 aa12.95□□□□□ -0.34
PSPC1-202ENST00000427943 C15orf53Q8NAA6 179 aa12.95□□□□□ -0.34
PSPC1-202ENST00000427943 SLC25A2Q9BXI2 301 aa12.95□□□□□ -0.34
PSPC1-202ENST00000427943 TIMM9Q9Y5J7 89 aa12.95□□□□□ -0.34
PSPC1-202ENST00000427943 TRAV12-3A0A0B4J271 114 aa12.94□□□□□ -0.34
PSPC1-202ENST00000427943 ZNF493Q6ZR52 646 aa12.94□□□□□ -0.34
PSPC1-202ENST00000427943 LINC00336Q6ZUF6 198 aa12.94□□□□□ -0.34
PSPC1-202ENST00000427943 MIR17HGQ75NE6 70 aa12.94□□□□□ -0.34
PSPC1-202ENST00000427943 EXOC3-AS1Q8N2X6 119 aa12.94□□□□□ -0.34
PSPC1-202ENST00000427943 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
PSPC1-202ENST00000427943 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
PSPC1-202ENST00000427943 MARVELD1Q9BSK0 173 aa12.94□□□□□ -0.34
PSPC1-202ENST00000427943 CBY3A6NI87 242 aa12.93□□□□□ -0.34
PSPC1-202ENST00000427943 RTL8CO15255 209 aa12.93□□□□□ -0.34
PSPC1-202ENST00000427943 SSNA1O43805 119 aa12.93□□□□□ -0.34
PSPC1-202ENST00000427943 CYCSP99999 105 aaKnown RBP12.93□□□□□ -0.34
PSPC1-202ENST00000427943 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
PSPC1-202ENST00000427943 RNF212Q495C1 297 aa12.93□□□□□ -0.34
PSPC1-202ENST00000427943 CCDC28AQ8IWP9 274 aa12.93□□□□□ -0.34
PSPC1-202ENST00000427943 PPP1R1CQ8WVI7 109 aa12.93□□□□□ -0.34
PSPC1-202ENST00000427943 WDR61Q9GZS3 305 aaKnown RBP12.93□□□□□ -0.34
PSPC1-202ENST00000427943 NUDT3O95989 172 aa12.92□□□□□ -0.34
PSPC1-202ENST00000427943 DEFA1P59665 94 aa12.92□□□□□ -0.34
PSPC1-202ENST00000427943 DEFA3P59666 94 aa12.92□□□□□ -0.34
PSPC1-202ENST00000427943 PDE6HQ13956 83 aa12.92□□□□□ -0.34
PSPC1-202ENST00000427943 FAM167A-AS1Q96KT0 104 aa12.92□□□□□ -0.34
PSPC1-202ENST00000427943 PRELID1Q9Y255 219 aa12.92□□□□□ -0.34
PSPC1-202ENST00000427943 ICAM4Q14773 271 aa12.91□□□□□ -0.34
PSPC1-202ENST00000427943 FAM122CQ6P4D5 195 aa12.91□□□□□ -0.34
PSPC1-202ENST00000427943 ATG101Q9BSB4 218 aa12.91□□□□□ -0.34
PSPC1-202ENST00000427943 AAMDCQ9H7C9 122 aa12.91□□□□□ -0.34
PSPC1-202ENST00000427943 KCNIP2Q9NS61 270 aa12.91□□□□□ -0.34
PSPC1-202ENST00000427943 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.34
PSPC1-202ENST00000427943 GAGE12BA1L429 117 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 PRSS29PA6NIE9 313 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 SNURFLB1AK76 121 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 GAGE7O76087 117 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 MPC2O95563 127 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.34
PSPC1-202ENST00000427943 OR10J4P0C629 311 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 GAGE12FP0CL80 117 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 GAGE12GP0CL81 117 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 GAGE12IP0CL82 117 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 BTN1A1Q13410 526 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 Q6ZR54 194 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 ATP5SQ99766 215 aa12.9□□□□□ -0.34
PSPC1-202ENST00000427943 OR51M1Q9H341 326 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms