RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 PRR31Q5SQ13 230 aa10.8□□□□□ -0.68
APOBEC3D-202ENST00000427494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.8□□□□□ -0.68
APOBEC3D-202ENST00000427494 KCNS1Q96KK3 526 aa10.8□□□□□ -0.68
APOBEC3D-202ENST00000427494 SPG11Q96JI7 2443 aa10.8□□□□□ -0.68
APOBEC3D-202ENST00000427494 SCGB1D1O95968 90 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 IGHG4P01861 327 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 BLCAPP62952 87 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 IQCJQ1A5X6 159 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 MAPK1IP1LQ8NDC0 245 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 C18orf32Q8TCD1 76 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 PRO1933Q9H354 126 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 ZNF462Q96JM2 2506 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 FBLL1A6NHQ2 334 aaKnown RBP10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 H3BUA1 57 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 PPIFP30405 207 aaKnown RBP10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 PKIAP61925 76 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 C1orf194Q5T5A4 169 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 LCN12Q6JVE5 192 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 Q6ZWC4 215 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 Q8TAT8 98 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 VGLL1Q99990 258 aa10.79□□□□□ -0.68
APOBEC3D-202ENST00000427494 A0A1W2PS18 150 aa10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 A8MWP6 167 aa10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 SAPCD1Q5SSQ6 148 aa10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 LCE2DQ5TA82 110 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 Q6ZS46 218 aa10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 SIGLECL1Q8N7X8 197 aa10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 PRR25Q96S07 402 aa10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 SLC50A1Q9BRV3 221 aa10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 ALKBH7Q9BT30 221 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 ZFYVE26Q68DK2 2539 aa10.78□□□□□ -0.68
APOBEC3D-202ENST00000427494 TSTD3H0UI37 97 aa10.77□□□□□ -0.68
APOBEC3D-202ENST00000427494 SH2D1AO60880 128 aa10.77□□□□□ -0.68
APOBEC3D-202ENST00000427494 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.68
APOBEC3D-202ENST00000427494 KLF5Q13887 457 aaPredicted RBP10.77□□□□□ -0.68
APOBEC3D-202ENST00000427494 FAM162BQ5T6X4 162 aa10.77□□□□□ -0.68
APOBEC3D-202ENST00000427494 RNF182Q8N6D2 247 aa10.77□□□□□ -0.68
APOBEC3D-202ENST00000427494 NAGKQ9UJ70 344 aa10.77□□□□□ -0.68
APOBEC3D-202ENST00000427494 U3KQE9 123 aa10.77□□□□□ -0.68
APOBEC3D-202ENST00000427494 J3QLI3 93 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 TGFAP01135 160 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 TRBV12-3P01733 135 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 GPX1P07203 203 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 PF4V1P10720 104 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 PMCHP20382 165 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 AMTP48728 403 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 DEFB112Q30KQ8 113 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 CRYBG3Q68DQ2 2970 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 USMG5Q96IX5 58 aa10.77□□□□□ -0.69
APOBEC3D-202ENST00000427494 UBR5O95071 2799 aaPredicted RBP10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 TMEM189A5PLL7 270 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 BRI3O95415 125 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 IGHV3-11P01762 117 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 CD33P20138 364 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 KRTAP10-9P60411 292 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 COX8CQ7Z4L0 72 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 CELSR1Q9NYQ6 3014 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 ZFHX3Q15911 3703 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 A0A1B0GUT8 65 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 PRAC2D3DTV9 90 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 ZNF324O75467 553 aaPredicted RBP10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 IGHV4-59P01825 116 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 ARMS2P0C7Q2 107 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 ERCC8Q13216 396 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 RIGQ13278 110 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 NDFIP1Q9BT67 221 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 TPPP3Q9BW30 176 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 KLK15Q9H2R5 256 aa10.76□□□□□ -0.69
APOBEC3D-202ENST00000427494 CELSR2Q9HCU4 2923 aa10.75□□□□□ -0.69
APOBEC3D-202ENST00000427494 TMSB15BA0A087X1C1 80 aa10.75□□□□□ -0.69
APOBEC3D-202ENST00000427494 NDUFA4O00483 81 aa10.75□□□□□ -0.69
APOBEC3D-202ENST00000427494 ZNF705DP0CH99 300 aaPredicted RBP10.75□□□□□ -0.69
APOBEC3D-202ENST00000427494 ZNF705BP0CI00 300 aaPredicted RBP10.75□□□□□ -0.69
APOBEC3D-202ENST00000427494 Q6AWC8 147 aa10.75□□□□□ -0.69
APOBEC3D-202ENST00000427494 ZNF664Q8N3J9 261 aa10.75□□□□□ -0.69
APOBEC3D-202ENST00000427494 LOXL1Q08397 574 aaPredicted RBP10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 UNQ9165/PRO28630Q6UXU0 137 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 LCNL1Q6ZST4 164 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 C8orf86Q6ZUL3 223 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 OR4X2Q8NGF9 303 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 BORCS7Q96B45 105 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 NRN1Q9NPD7 142 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 ANKRD17O75179 2603 aaKnown RBP10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 LOC102724200A0A096LPH7 203 aaPredicted RBP10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 TRAV8-2A0A0B4J237 113 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 RBAKDNA6NC62 111 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 IGLV1-40P01703 118 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 NTF3P20783 257 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 BMI1P35226 326 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 ZNF80P51504 273 aaPredicted RBP10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 CTAG1AP78358 180 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 TMEM95Q3KNT9 176 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 DMRTA1Q5VZB9 504 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 FAM19A2Q8N3H0 131 aa10.74□□□□□ -0.69
APOBEC3D-202ENST00000427494 IGHV4-31P0DP07 118 aa10.73□□□□□ -0.69
APOBEC3D-202ENST00000427494 RNASEKQ6P5S7 137 aaKnown RBP10.73□□□□□ -0.69
APOBEC3D-202ENST00000427494 GLMPQ8WWB7 406 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms