RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 AAMDCQ9H7C9 122 aa18.29■□□□□ 0.52
HERPUD2-205ENST00000427455 PRELID1Q9Y255 219 aa18.29■□□□□ 0.52
HERPUD2-205ENST00000427455 ZNF705EA8MWA4 302 aaPredicted RBP18.28■□□□□ 0.52
HERPUD2-205ENST00000427455 TCTE3Q8IZS6 198 aa18.28■□□□□ 0.52
HERPUD2-205ENST00000427455 ARPC5LQ9BPX5 153 aa18.28■□□□□ 0.52
HERPUD2-205ENST00000427455 CYTL1Q9NRR1 136 aa18.28■□□□□ 0.52
HERPUD2-205ENST00000427455 CDC34P49427 236 aaPredicted RBP18.27■□□□□ 0.52
HERPUD2-205ENST00000427455 PQLC2Q6ZP29 291 aa18.27■□□□□ 0.52
HERPUD2-205ENST00000427455 RPP25LQ8N5L8 163 aaKnown RBP18.27■□□□□ 0.52
HERPUD2-205ENST00000427455 OR10J6PQ8NGY7 276 aa18.27■□□□□ 0.52
HERPUD2-205ENST00000427455 A0A0D9SG52 128 aa18.26■□□□□ 0.51
HERPUD2-205ENST00000427455 PRAC2D3DTV9 90 aa18.26■□□□□ 0.51
HERPUD2-205ENST00000427455 C3orf84H3BNL1 204 aa18.26■□□□□ 0.51
HERPUD2-205ENST00000427455 EIF3GO75821 320 aaKnown RBP eCLIP18.26■□□□□ 0.51
HERPUD2-205ENST00000427455 AMBPP02760 352 aa18.26■□□□□ 0.51
HERPUD2-205ENST00000427455 PRB4P10163 310 aaPredicted RBP18.26■□□□□ 0.51
HERPUD2-205ENST00000427455 PHYHIPLQ96FC7 376 aa18.26■□□□□ 0.51
HERPUD2-205ENST00000427455 C11orf68Q9H3H3 251 aaKnown RBP18.26■□□□□ 0.51
HERPUD2-205ENST00000427455 hCG_2014768A0A024R1R8 64 aa18.25■□□□□ 0.51
HERPUD2-205ENST00000427455 BOLA2-SMG1P6H3BVE0 249 aa18.25■□□□□ 0.51
HERPUD2-205ENST00000427455 M0R3E3 92 aa18.25■□□□□ 0.51
HERPUD2-205ENST00000427455 EXOC3-AS1Q8N2X6 119 aa18.25■□□□□ 0.51
HERPUD2-205ENST00000427455 X6R8D5 127 aa18.25■□□□□ 0.51
HERPUD2-205ENST00000427455 MIFP14174 115 aa18.24■□□□□ 0.51
HERPUD2-205ENST00000427455 ICAM4Q14773 271 aa18.24■□□□□ 0.51
HERPUD2-205ENST00000427455 SPINK13Q1W4C9 94 aa18.24■□□□□ 0.51
HERPUD2-205ENST00000427455 IL17DQ8TAD2 202 aa18.24■□□□□ 0.51
HERPUD2-205ENST00000427455 PPP1R14DQ9NXH3 145 aa18.24■□□□□ 0.51
HERPUD2-205ENST00000427455 KANTRA0A1W2PQU2 76 aa18.23■□□□□ 0.51
HERPUD2-205ENST00000427455 M0R2Z0 102 aa18.23■□□□□ 0.51
HERPUD2-205ENST00000427455 HMGB3O15347 200 aaKnown RBP18.23■□□□□ 0.51
HERPUD2-205ENST00000427455 BCL2L11O43521 198 aa18.23■□□□□ 0.51
HERPUD2-205ENST00000427455 ZNF705AQ6ZN79 300 aaPredicted RBP18.23■□□□□ 0.51
HERPUD2-205ENST00000427455 LYPD1Q8N2G4 141 aa18.23■□□□□ 0.51
HERPUD2-205ENST00000427455 Q8NAQ8 132 aa18.23■□□□□ 0.51
HERPUD2-205ENST00000427455 RAB24Q969Q5 203 aa18.23■□□□□ 0.51
HERPUD2-205ENST00000427455 IGF2BP2-AS1Q96M15 143 aa18.23■□□□□ 0.51
HERPUD2-205ENST00000427455 STAG3L2P0CL84 134 aa18.22■□□□□ 0.51
HERPUD2-205ENST00000427455 STAG3L3P0CL85 134 aa18.22■□□□□ 0.51
HERPUD2-205ENST00000427455 AKAP14Q86UN6 197 aa18.22■□□□□ 0.51
HERPUD2-205ENST00000427455 ACTR3CQ9C0K3 210 aaPredicted RBP18.22■□□□□ 0.51
HERPUD2-205ENST00000427455 GOLT1BQ9Y3E0 138 aa18.22■□□□□ 0.51
HERPUD2-205ENST00000427455 IGHV4-28A0A0C4DH34 117 aa18.21■□□□□ 0.51
HERPUD2-205ENST00000427455 NPIPB6E9PJ23 425 aa18.21■□□□□ 0.51
HERPUD2-205ENST00000427455 INSP01308 110 aa18.21■□□□□ 0.51
HERPUD2-205ENST00000427455 ARL14EPLP0DKL9 152 aa18.21■□□□□ 0.51
HERPUD2-205ENST00000427455 RANP62826 216 aaKnown RBP18.2■□□□□ 0.5
HERPUD2-205ENST00000427455 AKR1C8PQ5T2L2 129 aa18.2■□□□□ 0.5
HERPUD2-205ENST00000427455 NEU1Q99519 415 aa18.2■□□□□ 0.5
HERPUD2-205ENST00000427455 Q9H3A6 140 aa18.2■□□□□ 0.5
HERPUD2-205ENST00000427455 IGHV3OR16-12A0A075B7B8 117 aa18.19■□□□□ 0.5
HERPUD2-205ENST00000427455 CRXO43186 299 aaPredicted RBP18.19■□□□□ 0.5
HERPUD2-205ENST00000427455 PFDN1O60925 122 aa18.19■□□□□ 0.5
HERPUD2-205ENST00000427455 CDKN1BP46527 198 aa18.19■□□□□ 0.5
HERPUD2-205ENST00000427455 BAP18Q8IXM2 172 aa18.19■□□□□ 0.5
HERPUD2-205ENST00000427455 ODF3Q96PU9 254 aa18.19■□□□□ 0.5
HERPUD2-205ENST00000427455 ZNF471Q9BX82 626 aaPredicted RBP18.19■□□□□ 0.5
HERPUD2-205ENST00000427455 CSMD3Q7Z407 3707 aa18.18■□□□□ 0.5
HERPUD2-205ENST00000427455 DEFB4AO15263 64 aa18.18■□□□□ 0.5
HERPUD2-205ENST00000427455 C1QBP02746 253 aa18.18■□□□□ 0.5
HERPUD2-205ENST00000427455 TMUB2Q71RG4 321 aa18.18■□□□□ 0.5
HERPUD2-205ENST00000427455 C1orf158Q8N1D5 194 aa18.18■□□□□ 0.5
HERPUD2-205ENST00000427455 SMIM9A6NGZ8 99 aa18.17■□□□□ 0.5
HERPUD2-205ENST00000427455 TSPOP30536 169 aa18.17■□□□□ 0.5
HERPUD2-205ENST00000427455 CSN1S1P47710 185 aa18.17■□□□□ 0.5
HERPUD2-205ENST00000427455 CASC10Q5T4H9 136 aa18.17■□□□□ 0.5
HERPUD2-205ENST00000427455 STARD9Q9P2P6 4700 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 TRAV12-2A0A075B6T6 113 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 CTXND1A0A1B0GTU2 59 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 CXorf1O96002 111 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 RBMY1A1P0DJD3 496 aaKnown RBP18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 RBMY1CP0DJD4 496 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 CT45A10P0DMU9 189 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 GCHFRP30047 84 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 EIF5AP63241 154 aaKnown RBP18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 RBMY1FQ15415 496 aaKnown RBP18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 ZFAND6Q6FIF0 208 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 SSX7Q7RTT5 188 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 TMEM208Q9BTX3 173 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 OTORQ9NRC9 128 aa18.16■□□□□ 0.5
HERPUD2-205ENST00000427455 IGKV2-40A0A087WW87 121 aaPredicted RBP18.15■□□□□ 0.5
HERPUD2-205ENST00000427455 IGKV2D-40P01614 121 aaPredicted RBP18.15■□□□□ 0.5
HERPUD2-205ENST00000427455 ZNF726P1Q15940 193 aa18.15■□□□□ 0.5
HERPUD2-205ENST00000427455 FAM74A1Q5RGS3 127 aa18.15■□□□□ 0.5
HERPUD2-205ENST00000427455 C9orf47Q6ZRZ4 202 aa18.15■□□□□ 0.5
HERPUD2-205ENST00000427455 SUN5Q8TC36 379 aa18.15■□□□□ 0.5
HERPUD2-205ENST00000427455 LINC00477Q96M19 166 aa18.15■□□□□ 0.5
HERPUD2-205ENST00000427455 TMEM167BQ9NRX6 74 aa18.15■□□□□ 0.5
HERPUD2-205ENST00000427455 SEC11BP0C7V7 166 aa18.14■□□□□ 0.49
HERPUD2-205ENST00000427455 LEPP41159 167 aa18.14■□□□□ 0.49
HERPUD2-205ENST00000427455 ERCC8Q13216 396 aa18.14■□□□□ 0.49
HERPUD2-205ENST00000427455 RXFP4Q8TDU9 374 aa18.14■□□□□ 0.49
HERPUD2-205ENST00000427455 HYLS1Q96M11 299 aa18.14■□□□□ 0.49
HERPUD2-205ENST00000427455 HBE1P02100 147 aa18.13■□□□□ 0.49
HERPUD2-205ENST00000427455 TPT1P13693 172 aaKnown RBP18.13■□□□□ 0.49
HERPUD2-205ENST00000427455 TMEM78Q5T7P6 136 aa18.13■□□□□ 0.49
HERPUD2-205ENST00000427455 AGPAT4-IT1Q9H0P7 198 aa18.13■□□□□ 0.49
HERPUD2-205ENST00000427455 A0A1B0GVG6 124 aa18.12■□□□□ 0.49
HERPUD2-205ENST00000427455 RBAKDNA6NC62 111 aa18.12■□□□□ 0.49
HERPUD2-205ENST00000427455 PGPA6NDG6 321 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms