RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 COL18A1P39060 1754 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 HIVEP3Q5T1R4 2406 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 IGHV1-45A0A0A0MS14 117 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 C4orf48Q5BLP8 95 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 Q6ZWC4 215 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 PIANPQ8IYJ0 282 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 NRTNQ99748 197 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 CXXC4Q9H2H0 198 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 THSD7AQ9UPZ6 1657 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 IGKV3D-7A0A0C4DH55 119 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 CCL11P51671 97 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 LIM2P55344 173 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 IGKV3OR2-268A0A0C4DH90 116 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 TMEM256-PLSCR3K7ERE1 68 aa6.42□□□□□ -1.38
LINC00649-203ENST00000427447 C3orf56Q8N813 242 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 SARAFQ96BY9 339 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 PRR13Q9NZ81 148 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 H0YIZ8 118 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 VSIG8P0DPA2 414 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 EGR1P18146 543 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 HIGD2BQ4VC39 106 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 NHSL1Q5SYE7 1610 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 Q6ZS92 163 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 NRACQ8N912 160 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 SMRP1Q8NCR6 262 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 A0A087WX48 190 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 TRBV6-7A0A0A0MS04 114 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 TNS1Q9HBL0 1735 aaKnown RBP6.41□□□□□ -1.38
LINC00649-203ENST00000427447 ZNF831Q5JPB2 1677 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 CLLU1OSQ5K130 101 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 GLI3P10071 1580 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 IGKV3D-11A0A0A0MRZ8 115 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 IGKV3-11P04433 115 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 CBLN3Q6UW01 205 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 TRPT1Q86TN4 253 aaKnown RBP6.41□□□□□ -1.38
LINC00649-203ENST00000427447 RFLNBQ8N5W9 214 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 KLF16Q9BXK1 252 aaPredicted RBP6.41□□□□□ -1.38
LINC00649-203ENST00000427447 LOC107984640A0A0U1RRK4 108 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 EGR4Q05215 589 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 Q9H3A6 140 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 C1orf100Q5SVJ3 147 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 GAFA1Q96PS6 74 aa6.41□□□□□ -1.38
LINC00649-203ENST00000427447 H0YIG0 161 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 UPK3BQ9BT76 320 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 MT-ATP8P03928 68 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 NPPCP23582 126 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 CD27P26842 260 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 MRPL51Q4U2R6 128 aaKnown RBP6.4□□□□□ -1.38
LINC00649-203ENST00000427447 C1QL2Q7Z5L3 287 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 MCRIP2Q9BUT9 160 aaKnown RBP6.4□□□□□ -1.38
LINC00649-203ENST00000427447 SAA2-SAA4A0A096LPE2 208 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 IGHMP01871 453 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 SAA2P0DJI9 122 aaPredicted RBP6.4□□□□□ -1.38
LINC00649-203ENST00000427447 DKK2Q9UBU2 259 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 LIFP15018 202 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 DAND5Q8N907 189 aa6.4□□□□□ -1.38
LINC00649-203ENST00000427447 IGHV1OR21-1A0A087WYE8 117 aa6.4□□□□□ -1.39
LINC00649-203ENST00000427447 HEXA-AS1Q9H8Q6 139 aa6.4□□□□□ -1.39
LINC00649-203ENST00000427447 E9PQ18 207 aa6.4□□□□□ -1.39
LINC00649-203ENST00000427447 C3orf36Q3SXR2 165 aa6.4□□□□□ -1.39
LINC00649-203ENST00000427447 CSPG4Q6UVK1 2322 aa6.4□□□□□ -1.39
LINC00649-203ENST00000427447 PGLYRP1O75594 196 aaPredicted RBP6.4□□□□□ -1.39
LINC00649-203ENST00000427447 EIF4EBP2Q13542 120 aaPredicted RBP6.4□□□□□ -1.39
LINC00649-203ENST00000427447 VN1R4Q7Z5H5 301 aa6.4□□□□□ -1.39
LINC00649-203ENST00000427447 FAM216BQ8N7L0 139 aa6.4□□□□□ -1.39
LINC00649-203ENST00000427447 IGKV1D-42A0A075B6H8 117 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 COX7A2LO14548 114 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 TRAV14DV4A0A0A6YYC5 116 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 TRAV40A0A0B4J280 105 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 TEX22C9J3V5 150 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 DIAPH2-AS1Q14236 149 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 C18orf12Q96KH6 178 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 RCHY1Q96PM5 261 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 CXCL13O43927 109 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 CDAP32320 146 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 APRG1Q8IVJ8 170 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 LINC00526Q96FQ7 95 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 AGPAT4-IT1Q9H0P7 198 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 KCNE3Q9Y6H6 103 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 J3QT63 122 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 PTCRAQ6ISU1 281 aaPredicted RBP6.39□□□□□ -1.39
LINC00649-203ENST00000427447 OSR1Q8TAX0 266 aaPredicted RBP6.39□□□□□ -1.39
LINC00649-203ENST00000427447 DPH3P1Q9H4G8 78 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 SRSF3P84103 164 aaKnown RBP6.39□□□□□ -1.39
LINC00649-203ENST00000427447 FAM53BQ14153 422 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 TOMM6Q96B49 74 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.39□□□□□ -1.39
LINC00649-203ENST00000427447 MBD3L4A6NDZ8 208 aaPredicted RBP6.39□□□□□ -1.39
LINC00649-203ENST00000427447 MBD3L3A6NE82 208 aaPredicted RBP6.39□□□□□ -1.39
LINC00649-203ENST00000427447 IGLV3-10A0A075B6K4 115 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 CRYGNQ8WXF5 182 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 PRSS22Q9GZN4 317 aa6.39□□□□□ -1.39
LINC00649-203ENST00000427447 COL9A3Q14050 684 aaPredicted RBP6.38□□□□□ -1.39
LINC00649-203ENST00000427447 IGHV1OR15-1A0A075B7D0 117 aa6.38□□□□□ -1.39
LINC00649-203ENST00000427447 PRR4Q16378 134 aa6.38□□□□□ -1.39
LINC00649-203ENST00000427447 FAM19A3Q7Z5A8 133 aa6.38□□□□□ -1.39
LINC00649-203ENST00000427447 A0A096LPE4 126 aa6.38□□□□□ -1.39
LINC00649-203ENST00000427447 A0A1W2PPZ6 126 aa6.38□□□□□ -1.39
LINC00649-203ENST00000427447 LIMD2Q9BT23 127 aa6.38□□□□□ -1.39
LINC00649-203ENST00000427447 DEFB108AA8MXU0 73 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms