RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CDX4O14627 284 aaPredicted RBP3.86□□□□□ -1.79
LINC00458-202ENST00000427299 CEACAM4O75871 244 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 P01737 135 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 IGHV1-46P01743 117 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 HLA-DRB1P01911 266 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 SLC25A5P05141 298 aaKnown RBP3.86□□□□□ -1.79
LINC00458-202ENST00000427299 OR5AL1P0C617 328 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 NTF3P20783 257 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 G0S2P27469 103 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 CTRLP40313 264 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 LGALS7P47929 136 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 MFAP2P55001 183 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 OR5I1Q13606 314 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 FXYD3Q14802 87 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 PLGLAQ15195 96 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 FAM106AQ4KMX7 169 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 ATP1A1-AS1Q5TC04 95 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 RNASEKQ6P5S7 137 aaKnown RBP3.86□□□□□ -1.79
LINC00458-202ENST00000427299 Q6ZRP5 223 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF596Q8TC21 504 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 C18orf32Q8TCD1 76 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 TRGV9Q99603 122 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 FAM103A1Q9BTL3 118 aaKnown RBP3.86□□□□□ -1.79
LINC00458-202ENST00000427299 TMEM208Q9BTX3 173 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 MRPL20Q9BYC9 149 aaKnown RBP3.86□□□□□ -1.79
LINC00458-202ENST00000427299 TMEM191AQ9H0A3 160 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 RNASE7Q9H1E1 156 aaKnown RBP3.86□□□□□ -1.79
LINC00458-202ENST00000427299 ST20Q9HBF5 79 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 HSPB8Q9UJY1 196 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 MRPS16Q9Y3D3 137 aaKnown RBP3.86□□□□□ -1.79
LINC00458-202ENST00000427299 MALRD1Q5VYJ5 2156 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 IGKV1OR2-108A0A075B7D4 117 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 TRAV9-2A0A087WT02 112 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 IGHV1-69-2A0A0G2JMI3 117 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 TRBV6-1A0A0K0K1D8 114 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 FBLL1A6NHQ2 334 aaKnown RBP3.85□□□□□ -1.79
LINC00458-202ENST00000427299 HIGD1CA8MV81 97 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 H3BTX0 84 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 NDUFB3O43676 98 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 IGLV2-8P01709 118 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 RBP4P02753 201 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 TFF1P04155 84 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 IGKV1-16P04430 117 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 C3orf79P0CE67 100 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 IGLC2P0DOY2 106 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 IGLC3P0DOY3 106 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 RPL27AP46776 148 aaKnown RBP3.85□□□□□ -1.79
LINC00458-202ENST00000427299 PRRX1P54821 245 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 XGP55808 180 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 TCL1AP56279 114 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 PLP1P60201 277 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 BATFQ16520 125 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 PVRIGQ6DKI7 326 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 IGFL3Q6UXB1 125 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF841Q6ZN19 808 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 Q6ZVQ6 151 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 LINC00305Q7Z4B0 112 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 Q86TA4 180 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 FAM216BQ8N7L0 139 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 OR9G1Q8NH87 305 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 ORAOV1Q8WV07 137 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 FAM167A-AS1Q96KT0 104 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 GPR82Q96P67 336 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 TMEM70Q9BUB7 260 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 OTORQ9NRC9 128 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 TNFRSF19Q9NS68 423 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 HIGD1AQ9Y241 93 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 LAMTOR2Q9Y2Q5 125 aa3.85□□□□□ -1.79
LINC00458-202ENST00000427299 PPIAL4EA0A075B759 164 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 LOC105371242A0A075B767 164 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 IGHV2-26A0A0B4J1V2 119 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 A0A1B0GXF2 115 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 HYPMO75409 117 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 FOXH1O75593 365 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 LTAP01374 205 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 PPIAL4FP0DN26 164 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 REG1BP48304 166 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 SLAQ13239 276 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 MMDQ15546 238 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 PRSS8Q16651 343 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 C12orf54Q6X4T0 127 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 NIT1Q86X76 327 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 LRRC75A-AS1Q8N1F1 130 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 ZCCHC24Q8N2G6 241 aaKnown RBP3.84□□□□□ -1.79
LINC00458-202ENST00000427299 C11orf42Q8N5U0 333 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF738Q8NE65 137 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 NUP35Q8NFH5 326 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 OR4F17Q8NGA8 305 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 OR8B3Q8NGG8 313 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 OR1B1Q8NGR6 318 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 FAM57AQ8TBR7 257 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 LEAP2Q969E1 77 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 FXYD5Q96DB9 178 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 RCHY1Q96PM5 261 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 OR8B2Q96RD0 313 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 CCL13Q99616 98 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 OVOL2Q9BRP0 275 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 MAP1LC3CQ9BXW4 147 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms