RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 TSPOP30536 169 aa7.67□□□□□ -1.18
LINC01238-202ENST00000426962 TMEM256Q8N2U0 113 aa7.67□□□□□ -1.18
LINC01238-202ENST00000426962 OR10J6PQ8NGY7 276 aa7.67□□□□□ -1.18
LINC01238-202ENST00000426962 FAM210BQ96KR6 192 aa7.67□□□□□ -1.18
LINC01238-202ENST00000426962 NDUFAF3Q9BU61 184 aa7.67□□□□□ -1.18
LINC01238-202ENST00000426962 ZNF586Q9NXT0 402 aa7.67□□□□□ -1.18
LINC01238-202ENST00000426962 TMEM14CQ9P0S9 112 aa7.67□□□□□ -1.18
LINC01238-202ENST00000426962 VPS13DQ5THJ4 4388 aa7.66□□□□□ -1.18
LINC01238-202ENST00000426962 TRBV19A0A075B6N1 114 aa7.66□□□□□ -1.18
LINC01238-202ENST00000426962 PRAC2D3DTV9 90 aa7.66□□□□□ -1.18
LINC01238-202ENST00000426962 MPC2O95563 127 aa7.66□□□□□ -1.18
LINC01238-202ENST00000426962 PET100P0DJ07 73 aa7.66□□□□□ -1.18
LINC01238-202ENST00000426962 HIST1H1EP10412 219 aaKnown RBP7.66□□□□□ -1.18
LINC01238-202ENST00000426962 TAS2R60P59551 318 aa7.66□□□□□ -1.18
LINC01238-202ENST00000426962 DAD1P61803 113 aa7.66□□□□□ -1.18
LINC01238-202ENST00000426962 CLINT1Q14677 625 aa7.66□□□□□ -1.18
LINC01238-202ENST00000426962 THAP6Q8TBB0 222 aa7.66□□□□□ -1.18
LINC01238-202ENST00000426962 WDR61Q9GZS3 305 aaKnown RBP7.66□□□□□ -1.18
LINC01238-202ENST00000426962 LYRM9A8MSI8 78 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 C17orf112F2Z3M2 114 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 P0DMU3 169 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 FAM231AP0DMU4 169 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 FAM231CP0DMU5 169 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 AZU1P20160 251 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 PDE6HQ13956 83 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 GCSAMLQ5JQS6 135 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 MRPL53Q96EL3 112 aaKnown RBP7.65□□□□□ -1.18
LINC01238-202ENST00000426962 C20orf144Q9BQM9 153 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 PRELID1Q9Y255 219 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 TIMM9Q9Y5J7 89 aa7.65□□□□□ -1.18
LINC01238-202ENST00000426962 H7BYZ3 331 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 NDUFB4O95168 129 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 CT45A10P0DMU9 189 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 PYYP10082 97 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 HTN1P15515 57 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 HTN3P15516 51 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 RPL12P30050 165 aaKnown RBP7.64□□□□□ -1.19
LINC01238-202ENST00000426962 ODF3Q96PU9 254 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 ATP5SQ99766 215 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 KCNIP2Q9NS61 270 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 HSPB11Q9Y547 144 aa7.64□□□□□ -1.19
LINC01238-202ENST00000426962 EPPK1P58107 5090 aaKnown RBP7.64□□□□□ -1.19
LINC01238-202ENST00000426962 PLAC8L1A1L4L8 177 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 NPIPB6E9PJ23 425 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 IFNA5P01569 189 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 NBEAP1P0C6P0 100 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 LEPP41159 167 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 KIR3DS1Q14943 382 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 ZNF493Q6ZR52 646 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 MIR17HGQ75NE6 70 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 POM121L12Q8N7R1 296 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 SCGB1C1Q8TD33 95 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 BLNKQ8WV28 456 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 C16orf74Q96GX8 76 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 FAM167A-AS1Q96KT0 104 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 LINC00477Q96M19 166 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 SLC25A2Q9BXI2 301 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 MRPL32Q9BYC8 188 aaKnown RBP7.63□□□□□ -1.19
LINC01238-202ENST00000426962 OR51M1Q9H341 326 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 AAMDCQ9H7C9 122 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 TIMM8BQ9Y5J9 83 aaPredicted RBP7.63□□□□□ -1.19
LINC01238-202ENST00000426962 DNAH6Q9C0G6 4158 aa7.63□□□□□ -1.19
LINC01238-202ENST00000426962 M0R3E3 92 aa7.62□□□□□ -1.19
LINC01238-202ENST00000426962 DEFB130BP0DP73 79 aa7.62□□□□□ -1.19
LINC01238-202ENST00000426962 DEFB130AP0DP74 79 aa7.62□□□□□ -1.19
LINC01238-202ENST00000426962 FCN2Q15485 313 aa7.62□□□□□ -1.19
LINC01238-202ENST00000426962 GFI1BQ5VTD9 330 aa7.62□□□□□ -1.19
LINC01238-202ENST00000426962 CCDC28AQ8IWP9 274 aa7.62□□□□□ -1.19
LINC01238-202ENST00000426962 EXOC3-AS1Q8N2X6 119 aa7.62□□□□□ -1.19
LINC01238-202ENST00000426962 TMEM263Q8WUH6 116 aaKnown RBP7.62□□□□□ -1.19
LINC01238-202ENST00000426962 PARD6GQ9BYG4 376 aaPredicted RBP7.62□□□□□ -1.19
LINC01238-202ENST00000426962 FUT9Q9Y231 359 aa7.62□□□□□ -1.19
LINC01238-202ENST00000426962 CBY3A6NI87 242 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 J3KRW8 73 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 PTTG1O95997 202 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 SLC25A5P05141 298 aaKnown RBP7.61□□□□□ -1.19
LINC01238-202ENST00000426962 ERCC8Q13216 396 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 ICAM4Q14773 271 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 RNASE8Q8TDE3 154 aaKnown RBP7.61□□□□□ -1.19
LINC01238-202ENST00000426962 RNF141Q8WVD5 230 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 PAXXQ9BUH6 204 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 SMIM3Q9BZL3 60 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 MBD2Q9UBB5 411 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 ALG5Q9Y673 324 aa7.61□□□□□ -1.19
LINC01238-202ENST00000426962 TRAV12-3A0A0B4J271 114 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 ATP5G1P05496 136 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 OR10J4P0C629 311 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 ATP5G3P48201 142 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 FFAR4Q5NUL3 377 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 TMEM88Q6PEY1 159 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 C9orf47Q6ZRZ4 202 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 C15orf53Q8NAA6 179 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 FXYD5Q96DB9 178 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 PYGO2Q9BRQ0 406 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
LINC01238-202ENST00000426962 NOP10Q9NPE3 64 aaKnown RBP7.6□□□□□ -1.19
LINC01238-202ENST00000426962 DNAH10Q8IVF4 4471 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 F5H768 121 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 OR7C2O60412 319 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 NMBP08949 121 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms