RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 FAM181BA6NEQ2 426 aa11.02□□□□□ -0.65
CDK3-201ENST00000425876 FOSL1P15407 271 aa11.02□□□□□ -0.65
CDK3-201ENST00000425876 NHLRC2Q8NBF2 726 aa11.02□□□□□ -0.65
CDK3-201ENST00000425876 PSG8Q9UQ74 426 aa11.02□□□□□ -0.65
CDK3-201ENST00000425876 ANK3Q12955 4377 aaKnown RBP11.02□□□□□ -0.65
CDK3-201ENST00000425876 IGHV3OR16-13A0A075B7E8 117 aa11.01□□□□□ -0.65
CDK3-201ENST00000425876 IGHV3-74A0A0B4J1X5 117 aa11.01□□□□□ -0.65
CDK3-201ENST00000425876 IGHV7-4-1A0A0J9YVY3 117 aa11.01□□□□□ -0.65
CDK3-201ENST00000425876 ZNF320A2RRD8 509 aa11.01□□□□□ -0.65
CDK3-201ENST00000425876 FAM3BP58499 235 aaPredicted RBP11.01□□□□□ -0.65
CDK3-201ENST00000425876 RPEL1Q2QD12 228 aa11.01□□□□□ -0.65
CDK3-201ENST00000425876 Q6ZSV7 163 aa11.01□□□□□ -0.65
CDK3-201ENST00000425876 SGK494Q96LW2 274 aa11.01□□□□□ -0.65
CDK3-201ENST00000425876 ESM1Q9NQ30 184 aa11.01□□□□□ -0.65
CDK3-201ENST00000425876 UFC1Q9Y3C8 167 aa11.01□□□□□ -0.65
CDK3-201ENST00000425876 IGHV3-49A0A0A0MS15 119 aa11□□□□□ -0.65
CDK3-201ENST00000425876 TRAV8-1A0A0A6YYK1 113 aa11□□□□□ -0.65
CDK3-201ENST00000425876 CHEK1O14757 476 aa11□□□□□ -0.65
CDK3-201ENST00000425876 RNASE1P07998 156 aaKnown RBP11□□□□□ -0.65
CDK3-201ENST00000425876 LCN12Q6JVE5 192 aa11□□□□□ -0.65
CDK3-201ENST00000425876 Q71RC1 249 aaPredicted RBP11□□□□□ -0.65
CDK3-201ENST00000425876 PRNTQ86SH4 94 aa11□□□□□ -0.65
CDK3-201ENST00000425876 KLHDC1Q8N7A1 406 aa11□□□□□ -0.65
CDK3-201ENST00000425876 NUDT10Q8NFP7 164 aa11□□□□□ -0.65
CDK3-201ENST00000425876 NUDT11Q96G61 164 aa11□□□□□ -0.65
CDK3-201ENST00000425876 SMPXQ9UHP9 88 aa11□□□□□ -0.65
CDK3-201ENST00000425876 SETD2Q9BYW2 2564 aaPredicted RBP11□□□□□ -0.65
CDK3-201ENST00000425876 SMIM27A0A1W2PRY6 76 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 RBAKDNA6NC62 111 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 C19orf71A6NCJ1 209 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 ZNF705GA8MUZ8 300 aaPredicted RBP10.99□□□□□ -0.65
CDK3-201ENST00000425876 GATCO43716 136 aaKnown RBP10.99□□□□□ -0.65
CDK3-201ENST00000425876 LY6G6DO95868 133 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 BMI1P35226 326 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 CDX1P47902 265 aaPredicted RBP10.99□□□□□ -0.65
CDK3-201ENST00000425876 C8orf86Q6ZUL3 223 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 COX8CQ7Z4L0 72 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 REC114Q7Z4M0 266 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 ZNF418Q8TF45 676 aaPredicted RBP10.99□□□□□ -0.65
CDK3-201ENST00000425876 WFDC12Q8WWY7 111 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 NF1P21359 2839 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 LGALS9O00182 355 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 SRD5A1P18405 259 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 RPL19P84098 196 aaKnown RBP10.99□□□□□ -0.65
CDK3-201ENST00000425876 CT83Q5H943 113 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 RHPN1-AS1Q9BWJ2 59 aa10.99□□□□□ -0.65
CDK3-201ENST00000425876 TRAV8-2A0A0B4J237 113 aa10.98□□□□□ -0.65
CDK3-201ENST00000425876 A8MWP6 167 aa10.98□□□□□ -0.65
CDK3-201ENST00000425876 TRGC2P03986 189 aa10.98□□□□□ -0.65
CDK3-201ENST00000425876 TM4SF20Q53R12 229 aa10.98□□□□□ -0.65
CDK3-201ENST00000425876 SAPCD1Q5SSQ6 148 aa10.98□□□□□ -0.65
CDK3-201ENST00000425876 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
CDK3-201ENST00000425876 ZFP82Q8N141 532 aa10.98□□□□□ -0.65
CDK3-201ENST00000425876 WIPF2Q8TF74 440 aaPredicted RBP10.98□□□□□ -0.65
CDK3-201ENST00000425876 NPIPB6E9PJ23 425 aa10.97□□□□□ -0.65
CDK3-201ENST00000425876 PHOX2AO14813 284 aa10.97□□□□□ -0.65
CDK3-201ENST00000425876 HLA-DMBP28068 263 aa10.97□□□□□ -0.65
CDK3-201ENST00000425876 HILS1P60008 231 aa10.97□□□□□ -0.65
CDK3-201ENST00000425876 OR4B1Q8NGF8 309 aa10.97□□□□□ -0.65
CDK3-201ENST00000425876 DAZAP1Q96EP5 407 aaKnown RBP10.97□□□□□ -0.65
CDK3-201ENST00000425876 C16orf95Q9H693 158 aa10.97□□□□□ -0.65
CDK3-201ENST00000425876 IGKV2-40A0A087WW87 121 aaPredicted RBP10.96□□□□□ -0.65
CDK3-201ENST00000425876 IGKV2D-40P01614 121 aaPredicted RBP10.96□□□□□ -0.65
CDK3-201ENST00000425876 P01737 135 aa10.96□□□□□ -0.65
CDK3-201ENST00000425876 SAMD13Q5VXD3 122 aa10.96□□□□□ -0.65
CDK3-201ENST00000425876 IGFL4Q6B9Z1 124 aa10.96□□□□□ -0.65
CDK3-201ENST00000425876 LINC00322Q6ZN03 302 aaPredicted RBP10.96□□□□□ -0.65
CDK3-201ENST00000425876 GBGT1Q8N5D6 347 aa10.96□□□□□ -0.65
CDK3-201ENST00000425876 TSKUQ8WUA8 353 aa10.96□□□□□ -0.65
CDK3-201ENST00000425876 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
CDK3-201ENST00000425876 HIVEP2P31629 2446 aa10.96□□□□□ -0.65
CDK3-201ENST00000425876 IGHV4OR15-8A0A075B7B6 117 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 A0A087WW49 117 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 TMEM213A2RRL7 107 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 FAM231BA6NCW3 169 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 ZNF705FA8MVS1 300 aaPredicted RBP10.95□□□□□ -0.66
CDK3-201ENST00000425876 A8MWL6 223 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 SOCS3O14543 225 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 COX19Q49B96 90 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 C4orf3Q8WVX3 66 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 ZC2HC1AQ96GY0 325 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 C16orf92Q96LL3 132 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 PRR25Q96S07 402 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 JMJD8Q96S16 334 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 NRN1Q9NPD7 142 aa10.95□□□□□ -0.66
CDK3-201ENST00000425876 S100A6P06703 90 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 HOXD3P31249 432 aaPredicted RBP10.94□□□□□ -0.66
CDK3-201ENST00000425876 KLF5Q13887 457 aaPredicted RBP10.94□□□□□ -0.66
CDK3-201ENST00000425876 TCTEX1D4Q5JR98 221 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 RNF182Q8N6D2 247 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 VGLL1Q99990 258 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 GFRA4Q9GZZ7 299 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 PPP1R14DQ9NXH3 145 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 IZUMO1RA6ND01 250 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 CT45A10P0DMU9 189 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 ACTL10Q5JWF8 245 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 NDFIP1Q9BT67 221 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 NAT8BQ9UHF3 227 aa10.94□□□□□ -0.66
CDK3-201ENST00000425876 PRAC2D3DTV9 90 aa10.93□□□□□ -0.66
CDK3-201ENST00000425876 HIST1H2BKO60814 126 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms