RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 ALKAL2Q6UX46 152 aa17.84■□□□□ 0.45
APOE-202ENST00000425718 RNF182Q8N6D2 247 aa17.84■□□□□ 0.45
APOE-202ENST00000425718 RPUSD4Q96CM3 377 aaKnown RBP17.84■□□□□ 0.45
APOE-202ENST00000425718 C20orf173Q96LM9 149 aa17.84■□□□□ 0.45
APOE-202ENST00000425718 KIR2DL5BA0A0G2JN68 375 aa17.83■□□□□ 0.44
APOE-202ENST00000425718 KIR2DL5BA0A0G2JPC4 375 aa17.83■□□□□ 0.44
APOE-202ENST00000425718 ZNF705EA8MWA4 302 aaPredicted RBP17.83■□□□□ 0.44
APOE-202ENST00000425718 EIF3GO75821 320 aaKnown RBP eCLIP17.83■□□□□ 0.44
APOE-202ENST00000425718 IFNA7P01567 189 aa17.83■□□□□ 0.44
APOE-202ENST00000425718 ICAM4Q14773 271 aa17.83■□□□□ 0.44
APOE-202ENST00000425718 MORN3Q6PF18 240 aaPredicted RBP17.83■□□□□ 0.44
APOE-202ENST00000425718 KIR2DL5AQ8N109 375 aa17.83■□□□□ 0.44
APOE-202ENST00000425718 OR10J6PQ8NGY7 276 aa17.83■□□□□ 0.44
APOE-202ENST00000425718 KIR2DL5BQ8NHK3 375 aa17.83■□□□□ 0.44
APOE-202ENST00000425718 CMTM2Q8TAZ6 248 aa17.83■□□□□ 0.44
APOE-202ENST00000425718 A0A0J9YX75 114 aa17.82■□□□□ 0.44
APOE-202ENST00000425718 FGF8P55075 233 aaPredicted RBP17.82■□□□□ 0.44
APOE-202ENST00000425718 IGFL4Q6B9Z1 124 aa17.82■□□□□ 0.44
APOE-202ENST00000425718 H3BMM0 161 aa17.81■□□□□ 0.44
APOE-202ENST00000425718 UBE2CO00762 179 aa17.81■□□□□ 0.44
APOE-202ENST00000425718 FRMD6-AS1P0C7T7 363 aa17.81■□□□□ 0.44
APOE-202ENST00000425718 OR8A1Q8NGG7 326 aa17.81■□□□□ 0.44
APOE-202ENST00000425718 CITED4Q96RK1 184 aa17.81■□□□□ 0.44
APOE-202ENST00000425718 SERTM2A0A1B0GWG4 89 aa17.8■□□□□ 0.44
APOE-202ENST00000425718 PGPA6NDG6 321 aa17.8■□□□□ 0.44
APOE-202ENST00000425718 KNCNA6PVL3 124 aa17.8■□□□□ 0.44
APOE-202ENST00000425718 TEX261Q6UWH6 196 aa17.8■□□□□ 0.44
APOE-202ENST00000425718 TRPT1Q86TN4 253 aaKnown RBP17.8■□□□□ 0.44
APOE-202ENST00000425718 EXOC3-AS1Q8N2X6 119 aa17.8■□□□□ 0.44
APOE-202ENST00000425718 HLA-DMBP28068 263 aa17.79■□□□□ 0.44
APOE-202ENST00000425718 ZNF124Q15973 351 aa17.79■□□□□ 0.44
APOE-202ENST00000425718 LINC00322Q6ZN03 302 aaPredicted RBP17.79■□□□□ 0.44
APOE-202ENST00000425718 C5orf17Q8NAS9 161 aa17.79■□□□□ 0.44
APOE-202ENST00000425718 TCEAL7Q9BRU2 100 aa17.79■□□□□ 0.44
APOE-202ENST00000425718 MANBALQ9NQG1 85 aa17.79■□□□□ 0.44
APOE-202ENST00000425718 RBMY1BA6NDE4 496 aaKnown RBP17.78■□□□□ 0.44
APOE-202ENST00000425718 RBMY1EA6NEQ0 496 aaKnown RBP17.78■□□□□ 0.44
APOE-202ENST00000425718 IFNA1P01562 189 aa17.78■□□□□ 0.44
APOE-202ENST00000425718 RBMY1DP0C7P1 496 aaKnown RBP17.78■□□□□ 0.44
APOE-202ENST00000425718 B9D2Q9BPU9 175 aa17.78■□□□□ 0.44
APOE-202ENST00000425718 C1QTNF4Q9BXJ3 329 aa17.78■□□□□ 0.44
APOE-202ENST00000425718 PPP1R14DQ9NXH3 145 aa17.78■□□□□ 0.44
APOE-202ENST00000425718 FBN3Q75N90 2809 aa17.78■□□□□ 0.44
APOE-202ENST00000425718 RBAKDNA6NC62 111 aa17.77■□□□□ 0.44
APOE-202ENST00000425718 K7EQM0 130 aa17.77■□□□□ 0.44
APOE-202ENST00000425718 SLC25A5P05141 298 aaKnown RBP17.77■□□□□ 0.44
APOE-202ENST00000425718 TAGLN2P37802 199 aaKnown RBP17.77■□□□□ 0.44
APOE-202ENST00000425718 HIST1H1AQ02539 215 aaPredicted RBP17.77■□□□□ 0.44
APOE-202ENST00000425718 OR4B1Q8NGF8 309 aa17.77■□□□□ 0.44
APOE-202ENST00000425718 TXNDC17Q9BRA2 123 aa17.77■□□□□ 0.44
APOE-202ENST00000425718 CSTL1Q9H114 145 aa17.77■□□□□ 0.44
APOE-202ENST00000425718 TMPRSS5Q9H3S3 457 aa17.77■□□□□ 0.44
APOE-202ENST00000425718 A8MTW9 85 aa17.76■□□□□ 0.43
APOE-202ENST00000425718 ZNF705FA8MVS1 300 aaPredicted RBP17.76■□□□□ 0.43
APOE-202ENST00000425718 M0R3E3 92 aa17.76■□□□□ 0.43
APOE-202ENST00000425718 AMBPP02760 352 aa17.76■□□□□ 0.43
APOE-202ENST00000425718 RPL35AP18077 110 aaKnown RBP17.76■□□□□ 0.43
APOE-202ENST00000425718 PMS2P11Q13670 270 aa17.76■□□□□ 0.43
APOE-202ENST00000425718 ZNF680Q8NEM1 530 aa17.76■□□□□ 0.43
APOE-202ENST00000425718 LINC00477Q96M19 166 aa17.76■□□□□ 0.43
APOE-202ENST00000425718 FAM74A7A6NL05 159 aa17.75■□□□□ 0.43
APOE-202ENST00000425718 CNN1P51911 297 aaKnown RBP17.75■□□□□ 0.43
APOE-202ENST00000425718 SUMO1P63165 101 aaKnown RBP17.75■□□□□ 0.43
APOE-202ENST00000425718 FBLL1A6NHQ2 334 aaKnown RBP17.74■□□□□ 0.43
APOE-202ENST00000425718 F6UB75 175 aa17.74■□□□□ 0.43
APOE-202ENST00000425718 F6UZH7 168 aa17.74■□□□□ 0.43
APOE-202ENST00000425718 GDF5OSQ5U4N7 250 aa17.74■□□□□ 0.43
APOE-202ENST00000425718 ODF3Q96PU9 254 aa17.74■□□□□ 0.43
APOE-202ENST00000425718 DIRC3C9JPN6 131 aa17.73■□□□□ 0.43
APOE-202ENST00000425718 TSPOP30536 169 aa17.73■□□□□ 0.43
APOE-202ENST00000425718 UBE2G2P60604 165 aa17.73■□□□□ 0.43
APOE-202ENST00000425718 TMEM78Q5T7P6 136 aa17.73■□□□□ 0.43
APOE-202ENST00000425718 CST9LP1Q5W188 147 aa17.73■□□□□ 0.43
APOE-202ENST00000425718 C9orf47Q6ZRZ4 202 aa17.73■□□□□ 0.43
APOE-202ENST00000425718 HIST1H2BAQ96A08 127 aa17.73■□□□□ 0.43
APOE-202ENST00000425718 MEGF8Q7Z7M0 2845 aa17.73■□□□□ 0.43
APOE-202ENST00000425718 A0A1B0GV50 99 aa17.72■□□□□ 0.43
APOE-202ENST00000425718 NPIPB6E9PJ23 425 aa17.72■□□□□ 0.43
APOE-202ENST00000425718 NHLRC4P0CG21 123 aaPredicted RBP17.72■□□□□ 0.43
APOE-202ENST00000425718 HAGHQ16775 308 aa17.72■□□□□ 0.43
APOE-202ENST00000425718 Q6ZWC4 215 aa17.72■□□□□ 0.43
APOE-202ENST00000425718 TRBV7-9A0A0J9YWB2 115 aa17.71■□□□□ 0.43
APOE-202ENST00000425718 GGTLC3B5MD39 225 aa17.71■□□□□ 0.43
APOE-202ENST00000425718 ATG101Q9BSB4 218 aa17.71■□□□□ 0.43
APOE-202ENST00000425718 ZMAT4Q9H898 229 aa17.71■□□□□ 0.43
APOE-202ENST00000425718 EPDR1Q9UM22 224 aa17.71■□□□□ 0.43
APOE-202ENST00000425718 YTHDF2Q9Y5A9 579 aaKnown RBP17.71■□□□□ 0.43
APOE-202ENST00000425718 PRAC2D3DTV9 90 aa17.7■□□□□ 0.42
APOE-202ENST00000425718 PAGE4O60829 102 aa17.7■□□□□ 0.42
APOE-202ENST00000425718 CA1P00915 261 aaPredicted RBP17.7■□□□□ 0.42
APOE-202ENST00000425718 DEFB1P60022 68 aa17.7■□□□□ 0.42
APOE-202ENST00000425718 LYPD6BQ8NI32 183 aa17.7■□□□□ 0.42
APOE-202ENST00000425718 SPATA25Q9BR10 227 aa17.7■□□□□ 0.42
APOE-202ENST00000425718 GNG13Q9P2W3 67 aa17.7■□□□□ 0.42
APOE-202ENST00000425718 LENEPQ9Y5L5 61 aa17.7■□□□□ 0.42
APOE-202ENST00000425718 IGKV3-20P01619 116 aa17.69■□□□□ 0.42
APOE-202ENST00000425718 TCRAP04437 139 aa17.69■□□□□ 0.42
APOE-202ENST00000425718 LEPP41159 167 aa17.69■□□□□ 0.42
APOE-202ENST00000425718 ZNF767PQ75MW2 155 aa17.69■□□□□ 0.42
APOE-202ENST00000425718 CYB561D1Q8N8Q1 229 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms