RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 EPDR1Q9UM22 224 aa10.3□□□□□ -0.76
COL12A1-205ENST00000425443 SPG11Q96JI7 2443 aa10.3□□□□□ -0.76
COL12A1-205ENST00000425443 M0R2Z0 102 aa10.3□□□□□ -0.76
COL12A1-205ENST00000425443 TIMM23O14925 209 aa10.3□□□□□ -0.76
COL12A1-205ENST00000425443 AP1S3Q96PC3 154 aa10.3□□□□□ -0.76
COL12A1-205ENST00000425443 TRGV9Q99603 122 aa10.3□□□□□ -0.76
COL12A1-205ENST00000425443 F11RQ9Y624 299 aaKnown RBP10.3□□□□□ -0.76
COL12A1-205ENST00000425443 A0A1B0GXF2 115 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 FAM231BA6NCW3 169 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 CD300EQ496F6 205 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-205ENST00000425443 TM4SF20Q53R12 229 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 FAM120AOSQ5T036 256 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 NEU4Q8WWR8 484 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-205ENST00000425443 RASL11BQ9BPW5 248 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 PRNTQ86SH4 94 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 CIARTQ8N365 385 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-205ENST00000425443 TMEM116Q8NCL8 245 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 IGLL1P15814 213 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 GAGE5Q13069 117 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 GAGE6Q13070 117 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 CDSNQ15517 529 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 OR4F17Q8NGA8 305 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 Q9H3A6 140 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 PEF1Q9UBV8 284 aaKnown RBP10.29□□□□□ -0.76
COL12A1-205ENST00000425443 HIGD1AQ9Y241 93 aa10.29□□□□□ -0.76
COL12A1-205ENST00000425443 NPIPB5A8MRT5 1133 aa10.28□□□□□ -0.76
COL12A1-205ENST00000425443 CSN3P07498 182 aa10.28□□□□□ -0.76
COL12A1-205ENST00000425443 ZNF138P52744 262 aa10.28□□□□□ -0.76
COL12A1-205ENST00000425443 ATP5G2Q06055 141 aa10.28□□□□□ -0.76
COL12A1-205ENST00000425443 KLF5Q13887 457 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-205ENST00000425443 FBXL19-AS1Q494R0 122 aa10.28□□□□□ -0.76
COL12A1-205ENST00000425443 GOLT1AQ6ZVE7 132 aa10.28□□□□□ -0.76
COL12A1-205ENST00000425443 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
COL12A1-205ENST00000425443 DPM3Q9P2X0 92 aa10.28□□□□□ -0.76
COL12A1-205ENST00000425443 HIST1H1EP10412 219 aaKnown RBP10.28□□□□□ -0.76
COL12A1-205ENST00000425443 CELSR1Q9NYQ6 3014 aa10.28□□□□□ -0.76
COL12A1-205ENST00000425443 P01737 135 aa10.27□□□□□ -0.76
COL12A1-205ENST00000425443 CRYGBP07316 175 aa10.27□□□□□ -0.76
COL12A1-205ENST00000425443 KLRD1Q13241 179 aa10.27□□□□□ -0.76
COL12A1-205ENST00000425443 C8orf46Q8TAG6 207 aa10.27□□□□□ -0.76
COL12A1-205ENST00000425443 C17orf77Q96MU5 243 aa10.27□□□□□ -0.76
COL12A1-205ENST00000425443 CITED2Q99967 270 aaPredicted RBP10.27□□□□□ -0.76
COL12A1-205ENST00000425443 COL25A1Q9BXS0 654 aaPredicted RBP10.27□□□□□ -0.76
COL12A1-205ENST00000425443 HSPB8Q9UJY1 196 aa10.27□□□□□ -0.76
COL12A1-205ENST00000425443 IGHV3OR16-8A0A075B7F1 116 aa10.27□□□□□ -0.77
COL12A1-205ENST00000425443 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.27□□□□□ -0.77
COL12A1-205ENST00000425443 OR2J3O76001 311 aa10.27□□□□□ -0.77
COL12A1-205ENST00000425443 ADORA2A-AS1P86434 159 aa10.27□□□□□ -0.77
COL12A1-205ENST00000425443 NEGR1Q7Z3B1 354 aa10.27□□□□□ -0.77
COL12A1-205ENST00000425443 ZFHX3Q15911 3703 aa10.27□□□□□ -0.77
COL12A1-205ENST00000425443 TEX22C9J3V5 150 aa10.27□□□□□ -0.77
COL12A1-205ENST00000425443 GP9P14770 177 aa10.27□□□□□ -0.77
COL12A1-205ENST00000425443 MTURNQ8N3F0 131 aa10.27□□□□□ -0.77
COL12A1-205ENST00000425443 DEFB125Q8N687 156 aa10.27□□□□□ -0.77
COL12A1-205ENST00000425443 TRAV25A0A0B4J276 109 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 NCBP2LA6PVI3 153 aaKnown RBP10.26□□□□□ -0.77
COL12A1-205ENST00000425443 OVOL3O00110 214 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 IGHV3-23P01764 117 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 COL8A1P27658 744 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 UQCRFS1P47985 274 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 GPR82Q96P67 336 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 KLF12Q9Y4X4 402 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 HRNRQ86YZ3 2850 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-205ENST00000425443 IGHV3-35A0A0C4DH35 117 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 hDV102S1A0JD36 115 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 ZNF785A8K8V0 405 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 HIST1H1AQ02539 215 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-205ENST00000425443 RASL11AQ6T310 242 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 NDFIP1Q9BT67 221 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 PRSS22Q9GZN4 317 aa10.26□□□□□ -0.77
COL12A1-205ENST00000425443 MRPL16Q9NX20 251 aaKnown RBP10.26□□□□□ -0.77
COL12A1-205ENST00000425443 NBR2O15453 112 aa10.25□□□□□ -0.77
COL12A1-205ENST00000425443 BVES-AS1Q5T3Y7 98 aa10.25□□□□□ -0.77
COL12A1-205ENST00000425443 RNF5Q99942 180 aa10.25□□□□□ -0.77
COL12A1-205ENST00000425443 ANAPC13Q9BS18 74 aa10.25□□□□□ -0.77
COL12A1-205ENST00000425443 TMSB15BA0A087X1C1 80 aa10.25□□□□□ -0.77
COL12A1-205ENST00000425443 C7orf71A4D174 169 aa10.25□□□□□ -0.77
COL12A1-205ENST00000425443 C19orf71A6NCJ1 209 aa10.25□□□□□ -0.77
COL12A1-205ENST00000425443 NPFFR1Q9GZQ6 430 aa10.25□□□□□ -0.77
COL12A1-205ENST00000425443 RPP21Q9H633 154 aaKnown RBP10.25□□□□□ -0.77
COL12A1-205ENST00000425443 LTAP01374 205 aa10.24□□□□□ -0.77
COL12A1-205ENST00000425443 TCRAP04437 139 aa10.24□□□□□ -0.77
COL12A1-205ENST00000425443 VPREB3Q9UKI3 123 aa10.24□□□□□ -0.77
COL12A1-205ENST00000425443 TRAV9-2A0A087WT02 112 aa10.24□□□□□ -0.77
COL12A1-205ENST00000425443 IGHV1-24A0A0C4DH33 117 aa10.24□□□□□ -0.77
COL12A1-205ENST00000425443 H3BUT2 72 aa10.24□□□□□ -0.77
COL12A1-205ENST00000425443 M0R3E3 92 aa10.24□□□□□ -0.77
COL12A1-205ENST00000425443 CHEK1O14757 476 aa10.24□□□□□ -0.77
COL12A1-205ENST00000425443 BCL6BQ8N143 479 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-205ENST00000425443 SLC25A39Q9BZJ4 359 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-205ENST00000425443 HBBP68871 147 aa10.23□□□□□ -0.77
COL12A1-205ENST00000425443 LY6LH3BQJ8 138 aa10.23□□□□□ -0.77
COL12A1-205ENST00000425443 IGLV2-11P01706 119 aa10.23□□□□□ -0.77
COL12A1-205ENST00000425443 FOXE3Q13461 319 aa10.23□□□□□ -0.77
COL12A1-205ENST00000425443 C5orf47Q569G3 176 aa10.23□□□□□ -0.77
COL12A1-205ENST00000425443 PVRIGQ6DKI7 326 aa10.23□□□□□ -0.77
COL12A1-205ENST00000425443 I3L2K1 104 aa10.22□□□□□ -0.77
COL12A1-205ENST00000425443 IL4P05112 153 aa10.22□□□□□ -0.77
COL12A1-205ENST00000425443 LY6G5BQ8NDX9 201 aa10.22□□□□□ -0.77
COL12A1-205ENST00000425443 A8MWL6 223 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms