RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
DDR1-234ENST00000424544 FAM74A1Q5RGS3 127 aa11.72□□□□□ -0.53
DDR1-234ENST00000424544 MORN3Q6PF18 240 aaPredicted RBP11.72□□□□□ -0.53
DDR1-234ENST00000424544 BPIFA4PQ86YQ2 179 aa11.72□□□□□ -0.53
DDR1-234ENST00000424544 FAM213BQ8TBF2 198 aa11.72□□□□□ -0.53
DDR1-234ENST00000424544 FAM167A-AS1Q96KT0 104 aa11.72□□□□□ -0.53
DDR1-234ENST00000424544 HELTA6NFD8 242 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 KNCNA6PVL3 124 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 DEFB4AO15263 64 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 EIF3GO75821 320 aaKnown RBP eCLIP11.71□□□□□ -0.53
DDR1-234ENST00000424544 ZNF688P0C7X2 276 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 STAG3L2P0CL84 134 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 STAG3L3P0CL85 134 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 S100A1P23297 94 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 ZNF726P1Q15940 193 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 MBD3L1Q8WWY6 194 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 SLC25A2Q9BXI2 301 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 OR51M1Q9H341 326 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 TMEM14CQ9P0S9 112 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 X6R8D5 127 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 FAT2Q9NYQ8 4349 aa11.71□□□□□ -0.53
DDR1-234ENST00000424544 DNAH17Q9UFH2 4485 aa11.7□□□□□ -0.54
DDR1-234ENST00000424544 HMGB3O15347 200 aaKnown RBP11.7□□□□□ -0.54
DDR1-234ENST00000424544 H2AFB1P0C5Y9 115 aa11.7□□□□□ -0.54
DDR1-234ENST00000424544 GALR1P47211 349 aa11.7□□□□□ -0.54
DDR1-234ENST00000424544 TCTAP57738 103 aa11.7□□□□□ -0.54
DDR1-234ENST00000424544 KHDC3LQ587J8 217 aa11.7□□□□□ -0.54
DDR1-234ENST00000424544 SIGLEC15Q6ZMC9 328 aa11.7□□□□□ -0.54
DDR1-234ENST00000424544 LRRC20Q8TCA0 184 aa11.7□□□□□ -0.54
DDR1-234ENST00000424544 MRPS12O15235 138 aaKnown RBP11.69□□□□□ -0.54
DDR1-234ENST00000424544 CXorf1O96002 111 aa11.69□□□□□ -0.54
DDR1-234ENST00000424544 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
DDR1-234ENST00000424544 IFITM2Q01629 132 aa11.69□□□□□ -0.54
DDR1-234ENST00000424544 LCN15Q6UWW0 184 aa11.69□□□□□ -0.54
DDR1-234ENST00000424544 PQLC2Q6ZP29 291 aa11.69□□□□□ -0.54
DDR1-234ENST00000424544 SSX7Q7RTT5 188 aa11.69□□□□□ -0.54
DDR1-234ENST00000424544 SFT2D1Q8WV19 159 aa11.69□□□□□ -0.54
DDR1-234ENST00000424544 SAT2Q96F10 170 aaPredicted RBP11.69□□□□□ -0.54
DDR1-234ENST00000424544 PAXXQ9BUH6 204 aa11.69□□□□□ -0.54
DDR1-234ENST00000424544 IGHV4-28A0A0C4DH34 117 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 OR7C2O60412 319 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
DDR1-234ENST00000424544 MIFP14174 115 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 ACTL10Q5JWF8 245 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 C2CD4CQ8TF44 421 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 ZNF503Q96F45 646 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 NRN1Q9NPD7 142 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 APLNQ9ULZ1 77 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 HECTD4Q9Y4D8 3996 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 HERC2O95714 4834 aa11.68□□□□□ -0.54
DDR1-234ENST00000424544 TEX46H3BTG2 121 aa11.67□□□□□ -0.54
DDR1-234ENST00000424544 PYYP10082 97 aa11.67□□□□□ -0.54
DDR1-234ENST00000424544 RAB14P61106 215 aa11.67□□□□□ -0.54
DDR1-234ENST00000424544 A0A087X0K7 114 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 TRAV1-1A0A0B4J248 108 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 C11orf94C9JXX5 98 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 H3BMM0 161 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 H3BQ15 152 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 ATP6V1G1O75348 118 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 HBE1P02100 147 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 NBEAP1P0C6P0 100 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 ARL14EPLP0DKL9 152 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 IGLC2P0DOY2 106 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 GCHFRP30047 84 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 FGF8P55075 233 aaPredicted RBP11.66□□□□□ -0.54
DDR1-234ENST00000424544 GUK1Q16774 197 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 PSMG4Q5JS54 123 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 FXYD5Q96DB9 178 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 ZNF586Q9NXT0 402 aa11.66□□□□□ -0.54
DDR1-234ENST00000424544 SNRPCP09234 159 aaKnown RBP11.65□□□□□ -0.54
DDR1-234ENST00000424544 OR10J4P0C629 311 aa11.65□□□□□ -0.54
DDR1-234ENST00000424544 HLA-DMBP28068 263 aa11.65□□□□□ -0.54
DDR1-234ENST00000424544 MEOX2P50222 304 aa11.65□□□□□ -0.54
DDR1-234ENST00000424544 UBE2L3P68036 154 aaKnown RBP11.65□□□□□ -0.54
DDR1-234ENST00000424544 C17orf77Q96MU5 243 aa11.65□□□□□ -0.54
DDR1-234ENST00000424544 TMEM167BQ9NRX6 74 aa11.65□□□□□ -0.54
DDR1-234ENST00000424544 CLEC5AQ9NY25 188 aa11.65□□□□□ -0.54
DDR1-234ENST00000424544 SNRPD3P62318 126 aaKnown RBP11.64□□□□□ -0.55
DDR1-234ENST00000424544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.64□□□□□ -0.55
DDR1-234ENST00000424544 IQCF2Q8IXL9 164 aa11.64□□□□□ -0.55
DDR1-234ENST00000424544 SUN5Q8TC36 379 aa11.64□□□□□ -0.55
DDR1-234ENST00000424544 BLNKQ8WV28 456 aa11.64□□□□□ -0.55
DDR1-234ENST00000424544 TMPRSS5Q9H3S3 457 aa11.64□□□□□ -0.55
DDR1-234ENST00000424544 TRBV19A0A075B6N1 114 aa11.63□□□□□ -0.55
DDR1-234ENST00000424544 A0A1B0GV50 99 aa11.63□□□□□ -0.55
DDR1-234ENST00000424544 H3BTX0 84 aa11.63□□□□□ -0.55
DDR1-234ENST00000424544 SOCS3O14543 225 aa11.63□□□□□ -0.55
DDR1-234ENST00000424544 HLA-DRB4P13762 266 aa11.63□□□□□ -0.55
DDR1-234ENST00000424544 PSMB3P49720 205 aa11.63□□□□□ -0.55
DDR1-234ENST00000424544 CCL20P78556 96 aa11.63□□□□□ -0.55
DDR1-234ENST00000424544 CLUHP3Q96NS8 147 aa11.63□□□□□ -0.55
DDR1-234ENST00000424544 HLA-DRB4X5D2U9 266 aa11.63□□□□□ -0.55
DDR1-234ENST00000424544 ZNF253O75346 499 aa11.62□□□□□ -0.55
DDR1-234ENST00000424544 PSG9Q00887 426 aa11.62□□□□□ -0.55
DDR1-234ENST00000424544 PDE6HQ13956 83 aa11.62□□□□□ -0.55
DDR1-234ENST00000424544 C12orf74Q32Q52 190 aa11.62□□□□□ -0.55
DDR1-234ENST00000424544 GDF5OSQ5U4N7 250 aa11.62□□□□□ -0.55
DDR1-234ENST00000424544 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms