RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SUN5Q8TC36 379 aa10.02□□□□□ -0.81
PRPF39-202ENST00000424478 S100A7P31151 101 aa10.02□□□□□ -0.81
PRPF39-202ENST00000424478 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
PRPF39-202ENST00000424478 Q8TAT8 98 aa10.02□□□□□ -0.81
PRPF39-202ENST00000424478 TREM1Q9NP99 234 aa10.02□□□□□ -0.81
PRPF39-202ENST00000424478 SIGLEC8Q9NYZ4 499 aa10.02□□□□□ -0.81
PRPF39-202ENST00000424478 J3KRW8 73 aa10.01□□□□□ -0.81
PRPF39-202ENST00000424478 PPT1P50897 306 aa10.01□□□□□ -0.81
PRPF39-202ENST00000424478 MEF2BQ02080 365 aaPredicted RBP10.01□□□□□ -0.81
PRPF39-202ENST00000424478 LCN12Q6JVE5 192 aa10.01□□□□□ -0.81
PRPF39-202ENST00000424478 AAMDCQ9H7C9 122 aa10.01□□□□□ -0.81
PRPF39-202ENST00000424478 AURKAIP1Q9NWT8 199 aaPredicted RBP10.01□□□□□ -0.81
PRPF39-202ENST00000424478 PAFAH1B2P68402 229 aa10.01□□□□□ -0.81
PRPF39-202ENST00000424478 RPUSD4Q96CM3 377 aaKnown RBP10.01□□□□□ -0.81
PRPF39-202ENST00000424478 VGLL1Q99990 258 aa10.01□□□□□ -0.81
PRPF39-202ENST00000424478 MAP6D1Q9H9H5 199 aa10.01□□□□□ -0.81
PRPF39-202ENST00000424478 PGPEP1LA6NFU8 196 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 ZNF674Q2M3X9 581 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 CYB561D1Q8N8Q1 229 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 NHLRC2Q8NBF2 726 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 ACTL10Q5JWF8 245 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 PRR31Q5SQ13 230 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 MANBALQ9NQG1 85 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 VAX2Q9UIW0 290 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 A0A1W2PRE2 83 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 PSG3Q16557 428 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 CCDC28AQ8IWP9 274 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 CMTM2Q8TAZ6 248 aa10□□□□□ -0.81
PRPF39-202ENST00000424478 SPAG8Q99932 426 aaPredicted RBP10□□□□□ -0.81
PRPF39-202ENST00000424478 ISLRO14498 428 aa9.99□□□□□ -0.81
PRPF39-202ENST00000424478 FXYD7P58549 80 aa9.99□□□□□ -0.81
PRPF39-202ENST00000424478 DEFB125Q8N687 156 aa9.99□□□□□ -0.81
PRPF39-202ENST00000424478 OTORQ9NRC9 128 aa9.99□□□□□ -0.81
PRPF39-202ENST00000424478 IFNA1P01562 189 aa9.99□□□□□ -0.81
PRPF39-202ENST00000424478 HIST1H1AQ02539 215 aaPredicted RBP9.99□□□□□ -0.81
PRPF39-202ENST00000424478 ZNF506Q5JVG8 444 aa9.99□□□□□ -0.81
PRPF39-202ENST00000424478 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
PRPF39-202ENST00000424478 RAB19A4D1S5 217 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 OR4C46A6NHA9 309 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 PSG9Q00887 426 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 PDE6HQ13956 83 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 KIR3DS1Q14943 382 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 OR4B1Q8NGF8 309 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 SLC50A1Q9BRV3 221 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 MED9Q9NWA0 146 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 SNRPD3P62318 126 aaKnown RBP9.98□□□□□ -0.81
PRPF39-202ENST00000424478 RNF24Q9Y225 148 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 LINC00862A6NCI5 91 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 DIRC3C9JPN6 131 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 PEX7O00628 323 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 TCRAP04437 139 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 GPR61Q9BZJ8 451 aa9.98□□□□□ -0.81
PRPF39-202ENST00000424478 DNAH3Q8TD57 4116 aa9.97□□□□□ -0.81
PRPF39-202ENST00000424478 SRP19P09132 144 aaKnown RBP9.97□□□□□ -0.81
PRPF39-202ENST00000424478 Q6ZQT7 251 aa9.97□□□□□ -0.81
PRPF39-202ENST00000424478 MEOX2P50222 304 aa9.97□□□□□ -0.81
PRPF39-202ENST00000424478 C5orf17Q8NAS9 161 aa9.97□□□□□ -0.81
PRPF39-202ENST00000424478 MCRIP2Q9BUT9 160 aaKnown RBP9.97□□□□□ -0.81
PRPF39-202ENST00000424478 MEGF8Q7Z7M0 2845 aa9.97□□□□□ -0.81
PRPF39-202ENST00000424478 ID1P41134 155 aa9.96□□□□□ -0.81
PRPF39-202ENST00000424478 BEAN1Q3B7T3 259 aa9.96□□□□□ -0.81
PRPF39-202ENST00000424478 PRNTQ86SH4 94 aa9.96□□□□□ -0.81
PRPF39-202ENST00000424478 CD5P06127 495 aa9.96□□□□□ -0.82
PRPF39-202ENST00000424478 RPL35AP18077 110 aaKnown RBP9.96□□□□□ -0.82
PRPF39-202ENST00000424478 INSL3P51460 131 aa9.96□□□□□ -0.82
PRPF39-202ENST00000424478 C19orf73Q9NVV2 129 aa9.96□□□□□ -0.82
PRPF39-202ENST00000424478 TRBV20OR9-2A0A075B6H5 130 aa9.96□□□□□ -0.82
PRPF39-202ENST00000424478 TRAV25A0A0B4J276 109 aa9.96□□□□□ -0.82
PRPF39-202ENST00000424478 OR11H12B2RN74 326 aa9.96□□□□□ -0.82
PRPF39-202ENST00000424478 CNN1P51911 297 aaKnown RBP9.96□□□□□ -0.82
PRPF39-202ENST00000424478 AGPAT4-IT1Q9H0P7 198 aa9.96□□□□□ -0.82
PRPF39-202ENST00000424478 SFTA3P0C7M3 94 aa9.95□□□□□ -0.82
PRPF39-202ENST00000424478 RPL35P42766 123 aaKnown RBP9.95□□□□□ -0.82
PRPF39-202ENST00000424478 CSN1S1P47710 185 aa9.95□□□□□ -0.82
PRPF39-202ENST00000424478 ZNF253O75346 499 aa9.95□□□□□ -0.82
PRPF39-202ENST00000424478 OR8A1Q8NGG7 326 aa9.95□□□□□ -0.82
PRPF39-202ENST00000424478 TVP23CQ96ET8 276 aa9.95□□□□□ -0.82
PRPF39-202ENST00000424478 PARLQ9H300 379 aa9.95□□□□□ -0.82
PRPF39-202ENST00000424478 RBMY1BA6NDE4 496 aaKnown RBP9.94□□□□□ -0.82
PRPF39-202ENST00000424478 RBMY1EA6NEQ0 496 aaKnown RBP9.94□□□□□ -0.82
PRPF39-202ENST00000424478 F6UZH7 168 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 M0R2Z0 102 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 IGLV2-11P01706 119 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 RBMY1DP0C7P1 496 aaKnown RBP9.94□□□□□ -0.82
PRPF39-202ENST00000424478 ADCYAP1P18509 176 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 LYPD1Q8N2G4 141 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 C2CD4CQ8TF44 421 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 C8orf49Q96NF6 230 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 ATG101Q9BSB4 218 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 SLC35B3Q9H1N7 401 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 AKR1C3P42330 323 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 PEA15Q15121 130 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 SAMD5Q5TGI4 173 aa9.94□□□□□ -0.82
PRPF39-202ENST00000424478 GTSCR1Q86UQ5 136 aa9.93□□□□□ -0.82
PRPF39-202ENST00000424478 Q8N1Y9 231 aa9.93□□□□□ -0.82
PRPF39-202ENST00000424478 A0A0J9YX75 114 aa9.93□□□□□ -0.82
PRPF39-202ENST00000424478 CT45A10P0DMU9 189 aa9.93□□□□□ -0.82
PRPF39-202ENST00000424478 CLEC5AQ9NY25 188 aa9.93□□□□□ -0.82
PRPF39-202ENST00000424478 TENM3Q9P273 2699 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms