RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 THYN1Q9P016 225 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 RBAKDNA6NC62 111 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 F8W735 103 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-204ENST00000424143 H0Y8G0 127 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 CD3EP07766 207 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 FCER1GP30273 86 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 CACNG7P62955 275 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 SRSF1Q07955 248 aaKnown RBP eCLIP11.89□□□□□ -0.516e-7■■■□□ 18.9
C9orf3-204ENST00000424143 RNF151Q2KHN1 245 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 MAP1LC3AQ9H492 121 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 ODF3BA8MYP8 253 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 SMIM17P0DL12 118 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 KIR3DS1Q14943 382 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 NEGR1Q7Z3B1 354 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 ABHD17AQ96GS6 310 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 CSTL1Q9H114 145 aa11.89□□□□□ -0.51
C9orf3-204ENST00000424143 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
C9orf3-204ENST00000424143 EVI2AP22794 236 aa11.88□□□□□ -0.51
C9orf3-204ENST00000424143 COX7A1P24310 79 aa11.88□□□□□ -0.51
C9orf3-204ENST00000424143 EBI3Q14213 229 aa11.88□□□□□ -0.51
C9orf3-204ENST00000424143 C1orf122Q6ZSJ8 110 aa11.88□□□□□ -0.51
C9orf3-204ENST00000424143 OR2K2Q8NGT1 345 aa11.88□□□□□ -0.51
C9orf3-204ENST00000424143 C21orf62Q9NYP8 219 aa11.88□□□□□ -0.51
C9orf3-204ENST00000424143 A0A0G2JLM5 398 aa11.87□□□□□ -0.51
C9orf3-204ENST00000424143 LOC389332A0A1B0GUA5 103 aa11.87□□□□□ -0.51
C9orf3-204ENST00000424143 FABP5P3A8MUU1 101 aa11.87□□□□□ -0.51
C9orf3-204ENST00000424143 ATP5LO75964 103 aa11.87□□□□□ -0.51
C9orf3-204ENST00000424143 NPYP01303 97 aa11.87□□□□□ -0.51
C9orf3-204ENST00000424143 FOXE3Q13461 319 aa11.87□□□□□ -0.51
C9orf3-204ENST00000424143 ZNF672Q499Z4 452 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-204ENST00000424143 ZNF575Q86XF7 245 aa11.87□□□□□ -0.51
C9orf3-204ENST00000424143 RNF185Q96GF1 192 aa11.87□□□□□ -0.51
C9orf3-204ENST00000424143 ZGRF1Q86YA3 2104 aa11.87□□□□□ -0.51
C9orf3-204ENST00000424143 G3V4G9 280 aa11.86□□□□□ -0.51
C9orf3-204ENST00000424143 CCDC144NLQ6NUI1 221 aa11.86□□□□□ -0.51
C9orf3-204ENST00000424143 Q8N6K4 173 aa11.86□□□□□ -0.51
C9orf3-204ENST00000424143 TPPP3Q9BW30 176 aa11.86□□□□□ -0.51
C9orf3-204ENST00000424143 A0A1W2PPM0 123 aa11.86□□□□□ -0.51
C9orf3-204ENST00000424143 PRTN3P24158 256 aa11.86□□□□□ -0.51
C9orf3-204ENST00000424143 TWIST1Q15672 202 aa11.86□□□□□ -0.51
C9orf3-204ENST00000424143 ERASQ7Z444 233 aa11.86□□□□□ -0.51
C9orf3-204ENST00000424143 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
C9orf3-204ENST00000424143 IGHG4P01861 327 aa11.85□□□□□ -0.51
C9orf3-204ENST00000424143 ODF1Q14990 250 aa11.85□□□□□ -0.51
C9orf3-204ENST00000424143 FBXL19-AS1Q494R0 122 aa11.85□□□□□ -0.51
C9orf3-204ENST00000424143 MRPL53Q96EL3 112 aaKnown RBP11.85□□□□□ -0.51
C9orf3-204ENST00000424143 JMJD8Q96S16 334 aa11.85□□□□□ -0.51
C9orf3-204ENST00000424143 ASCL2Q99929 193 aa11.85□□□□□ -0.51
C9orf3-204ENST00000424143 HIF1ANQ9NWT6 349 aa11.85□□□□□ -0.51
C9orf3-204ENST00000424143 TIMM8BQ9Y5J9 83 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-204ENST00000424143 SMIM13P0DJ93 91 aa11.84□□□□□ -0.51
C9orf3-204ENST00000424143 TAL2Q16559 108 aa11.84□□□□□ -0.51
C9orf3-204ENST00000424143 MINOS1Q5TGZ0 78 aa11.84□□□□□ -0.51
C9orf3-204ENST00000424143 Q8N8P6 123 aa11.84□□□□□ -0.51
C9orf3-204ENST00000424143 VKORC1Q9BQB6 163 aa11.84□□□□□ -0.51
C9orf3-204ENST00000424143 HHLA3Q9XRX5 114 aa11.84□□□□□ -0.51
C9orf3-204ENST00000424143 SMAD5-AS1Q9Y6J3 95 aa11.84□□□□□ -0.51
C9orf3-204ENST00000424143 MINOS1-NBL1R4GNA1 71 aa11.84□□□□□ -0.51
C9orf3-204ENST00000424143 DMDP11532 3685 aa11.84□□□□□ -0.51
C9orf3-204ENST00000424143 IGKV2-40A0A087WW87 121 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-204ENST00000424143 H3BUT2 72 aa11.83□□□□□ -0.52
C9orf3-204ENST00000424143 IGKV2D-40P01614 121 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-204ENST00000424143 CTSGP08311 255 aa11.83□□□□□ -0.52
C9orf3-204ENST00000424143 KLF17Q5JT82 389 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-204ENST00000424143 Q8NA96 180 aa11.83□□□□□ -0.52
C9orf3-204ENST00000424143 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
C9orf3-204ENST00000424143 IGHV4-4A0A075B6R2 117 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-204ENST00000424143 LINC01619G3V211 115 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 KLK10O43240 276 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 SNAI2O43623 268 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 ZNF80P51504 273 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-204ENST00000424143 SLC50A1Q9BRV3 221 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 ONECUT1Q9UBC0 465 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 ABCA1O95477 2261 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 NBEAQ8NFP9 2946 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 IGLV2-18A0A075B6J9 118 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 TMSB15BA0A087X1C1 80 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 TNFRSF6BO95407 300 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 FABP2P12104 132 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 UQCRFS1P47985 274 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 VGLL1Q99990 258 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 MEGF9Q9H1U4 602 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 OTOGLQ3ZCN5 2332 aa11.82□□□□□ -0.52
C9orf3-204ENST00000424143 IGKCP01834 107 aa11.81□□□□□ -0.52
C9orf3-204ENST00000424143 DLX1P56177 255 aa11.81□□□□□ -0.52
C9orf3-204ENST00000424143 PCP2Q8IVA1 136 aa11.81□□□□□ -0.52
C9orf3-204ENST00000424143 BCL6BQ8N143 479 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-204ENST00000424143 ATP6V0BQ99437 205 aa11.81□□□□□ -0.52
C9orf3-204ENST00000424143 DKK2Q9UBU2 259 aa11.81□□□□□ -0.52
C9orf3-204ENST00000424143 DPM2O94777 84 aa11.8□□□□□ -0.52
C9orf3-204ENST00000424143 LEPP41159 167 aa11.8□□□□□ -0.52
C9orf3-204ENST00000424143 IL17RELQ6ZVW7 336 aa11.8□□□□□ -0.52
C9orf3-204ENST00000424143 TIMD4Q96H15 378 aa11.8□□□□□ -0.52
C9orf3-204ENST00000424143 SPCS1Q9Y6A9 102 aa11.8□□□□□ -0.52
C9orf3-204ENST00000424143 DSPP15924 2871 aaKnown RBP11.8□□□□□ -0.52
C9orf3-204ENST00000424143 PRRC2CQ9Y520 2896 aaKnown RBP11.8□□□□□ -0.52
C9orf3-204ENST00000424143 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
C9orf3-204ENST00000424143 PRSS57Q6UWY2 283 aa11.79□□□□□ -0.52
C9orf3-204ENST00000424143 SMKR1H3BMG3 65 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms